| Clone Name | rbaal7g12 |
|---|---|
| Clone Library Name | barley_pub |
>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box| protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28) (FDRMADS7) Length = 249 Score = 56.6 bits (135), Expect = 6e-08 Identities = 29/59 (49%), Positives = 33/59 (55%) Frame = -3 Query: 628 EQLSGAXXXXXXXXXXTAQDSMAPPNIGPYQSRGGGDPEPQPSPAQANNSNLPPWMLRT 452 E+ +GA TA D + N Q RG G+ E QPSPAQA NS LPPWMLRT Sbjct: 188 EEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQAGNSKLPPWMLRT 246
>TRYP_SARBU (P51588) Trypsin precursor (EC 3.4.21.4)| Length = 254 Score = 33.1 bits (74), Expect = 0.70 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = +2 Query: 101 GWNTKTVSTCKTIPQIH*SLHTKVQPQDRAHRSAKKKGN*NVETRHCSL*CRKSSRQEDP 280 GW TK TC ++P+ + + Q + K G+ +T C+ +K + Q D Sbjct: 149 GWGTKCFLTCVSLPKTLQEVEVDIVDQKACASNEFKYGSQIQDTMVCAYALKKDACQGDS 208 Query: 281 IHPVAKTHGLIGGYT-GSHCRR 343 P+ + L+G + GS C R Sbjct: 209 GGPLVANNQLVGIVSWGSGCAR 230
>ITA7_RAT (Q63258) Integrin alpha-7 (H36-alpha7) [Contains: Integrin alpha-7| heavy chain; Integrin alpha-7 light chain] Length = 1106 Score = 30.4 bits (67), Expect = 4.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -3 Query: 565 MAPPNIGPYQSRGGGDPEPQPSPAQANN 482 +A + GPY++ G D +P+PSP AN+ Sbjct: 206 LAQVDDGPYEAGGEKDQDPRPSPVPANS 233
>SPEE_SHIFL (Q83MF0) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 287 Score = 30.4 bits (67), Expect = 4.5 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +2 Query: 284 HPVAKTHGLIGGYTGSHCRRWTAHRQLASIVGACQAPLSPSGGVV*GCRQ--PSSVADGA 457 H AK +IGG G+ R T H+ + SI + GVV CRQ P+ A Sbjct: 74 HGHAKHVLIIGGGDGAMLREVTRHKNVESI-----TMVEIDAGVVSFCRQYLPNHNAGSY 128 Query: 458 EHPRWQIAV 484 + PR+Q+ + Sbjct: 129 DDPRFQLVI 137
>Y044_UREPA (Q9PRA1) Hypothetical protein UU044| Length = 782 Score = 30.4 bits (67), Expect = 4.5 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 574 QDSMAPPNIGPYQSRGGGDPEPQPSPAQA-NNSN 476 ++ + PPN P + +P PQP P Q NNSN Sbjct: 139 KEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSN 172
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 30.0 bits (66), Expect = 5.9 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 571 DSMAPPNIGPYQSRGGGDPEPQPSPAQANNSNLPPWMLRTI 449 D+ PP P Q + PEP+P P +A+ PP L+T+ Sbjct: 2201 DAPQPPAPQPAQDKA---PEPRPEPVRASKPAPPPQALQTL 2238
>HOLB_BUCAP (Q8K9J2) DNA polymerase III delta' subunit (EC 2.7.7.7)| Length = 328 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 129 VKPYRKSIKAYTRKSNHKIVLIDQRKKKG 215 +KPY+K I+ + RK H +LI +K G Sbjct: 8 IKPYKKIIRLHERKKAHHAILIKTQKGMG 36 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,942,774 Number of Sequences: 219361 Number of extensions: 2240134 Number of successful extensions: 7060 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 6606 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7038 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)