ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chr... 44 0.60
2emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chro... 44 0.60
3gb|AE017308.1| Mycoplasma mobile 163K complete genome 42 2.4
4gb|AC124365.5| Mus musculus BAC clone RP24-539F12 from chromosom... 42 2.4
5emb|CR792450.4| Zebrafish DNA sequence from clone RP71-15H2, com... 42 2.4
6gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 ma... 42 2.4
7emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 i... 42 2.4
8gb|AC069552.5|AC069552 Genomic Sequence For Arabidopsis thaliana... 42 2.4
9dbj|AP002462.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.4
10gb|AC154381.2| Mus musculus BAC clone RP23-42E2 from 16, complet... 42 2.4
11emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in... 42 2.4
12gb|AC140487.4| Mus musculus BAC clone RP24-139I9 from chromosome... 42 2.4
13gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 9.3
14ref|XM_516748.1| PREDICTED: Pan troglodytes similar to calcium-t... 40 9.3
15gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, co... 40 9.3
16ref|NM_131907.2| Rattus norvegicus ATPase, Ca++-sequestering (At... 40 9.3
17gb|AC165358.3| Mus musculus BAC clone RP23-122F14 from chromosom... 40 9.3
18ref|XM_416368.1| PREDICTED: Gallus gallus similar to hypothetica... 40 9.3
19gb|BC043091.1| Mus musculus ATPase, Ca++-sequestering, mRNA (cDN... 40 9.3
20ref|XM_981296.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
21ref|XM_981334.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
22ref|XM_981370.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
23ref|XM_981476.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
24ref|XM_981437.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
25ref|XM_981528.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
26ref|XM_981568.1| PREDICTED: Mus musculus ATPase, Ca++-sequesteri... 40 9.3
27ref|NM_001001487.1| Homo sapiens ATPase, Ca++ transporting, type... 40 9.3
28ref|NM_001001486.1| Homo sapiens ATPase, Ca++ transporting, type... 40 9.3
29ref|NM_014382.2| Homo sapiens ATPase, Ca++ transporting, type 2C... 40 9.3
30ref|NM_001001485.1| Homo sapiens ATPase, Ca++ transporting, type... 40 9.3
31ref|XM_846400.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
32ref|XM_858740.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
33ref|XM_858720.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
34ref|XM_858673.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
35ref|XM_858651.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
36ref|XM_858626.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
37ref|XM_858605.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
38ref|XM_858586.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
39ref|XM_858563.1| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
40ref|XM_534262.2| PREDICTED: Canis familiaris similar to calcium-... 40 9.3
41gb|AC117679.8| Mus musculus chromosome 9, clone RP23-435I22, com... 40 9.3
42gb|AC166347.2| Mus musculus BAC clone RP24-87G12 from chromosome... 40 9.3
43gb|DQ427109.1| Homo sapiens OTU domain containing 4 (OTUD4) gene... 40 9.3
44emb|AL357037.13| Human DNA sequence from clone RP11-383B24 on ch... 40 9.3
45gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, co... 40 9.3
46gb|AY268375.1| Homo sapiens secretory pathway Ca2+/Mn2+ transpor... 40 9.3
47gb|AY268374.1| Homo sapiens secretory pathway Ca2+/Mn2+ transpor... 40 9.3
48gb|AC055753.21| Homo sapiens 3 BAC RP11-503I22 (Roswell Park Can... 40 9.3
49emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC... 40 9.3
50emb|AJ551270.1|MMU551270 Mus musculus mRNA for PMR1/ATP2C1 prote... 40 9.3
51gb|BC086994.1| Rattus norvegicus ATPase, Ca++-sequestering, mRNA... 40 9.3
52emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chr... 40 9.3
53emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on ch... 40 9.3
54gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cance... 40 9.3
55gb|AC022276.35| Homo sapiens 12 BAC RP11-161A14 (Roswell Park Ca... 40 9.3
56dbj|AK074692.1| Homo sapiens cDNA FLJ90211 fis, clone MAMMA10020... 40 9.3
57gb|AC096757.3| Homo sapiens BAC clone RP11-543H9 from 4, complet... 40 9.3
58dbj|AK133703.1| Mus musculus 6 days neonate head cDNA, RIKEN ful... 40 9.3
59gb|AC023150.5| Homo sapiens BAC clone RP11-709L9 from 4, complet... 40 9.3
60dbj|AK159918.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 9.3
61dbj|AK163049.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 9.3
62emb|CR524361.1| Gallus gallus finished cDNA, clone ChEST808f9 40 9.3
63gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-3... 40 9.3
64emb|CR407391.1| Gallus gallus finished cDNA, clone ChEST812g2 40 9.3
65emb|BX950760.2| Gallus gallus finished cDNA, clone ChEST813d11 40 9.3
66ref|NM_075107.2| Caenorhabditis elegans Y59A8A.2 (Y59A8A.2) mRNA... 40 9.3
67dbj|AK028393.1| Mus musculus 18 days pregnant adult female place... 40 9.3
68emb|CR352787.1| Gallus gallus finished cDNA, clone ChEST439i14 40 9.3
69gb|AC097467.1| Homo sapiens BAC clone RP11-27G13 from 4, complet... 40 9.3
70gb|AC016845.14| Homo sapiens chromosome 11, clone RP11-5E23, com... 40 9.3
71gb|AC063932.14| Homo sapiens 3 BAC RP11-298A18 (Roswell Park Can... 40 9.3
72gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, compl... 40 9.3
73gb|AC091582.17| Homo sapiens chromosome 15, clone RP11-483O19, c... 40 9.3
74gb|AF225981.1|AF225981 Homo sapiens calcium transport ATPase ATP... 40 9.3
75gb|AF189723.2|AF189723 Homo sapiens calcium transport ATPase ATP... 40 9.3
76gb|AF230532.1|AF230532 Bos taurus secretory pathway Ca2+ transpo... 40 9.3
77dbj|AK173154.1| Mus musculus mRNA for mKIAA1347 protein 40 9.3
78ref|NM_175785.2| Bos taurus ATPase, Ca++ transporting, type 2C, ... 40 9.3
79ref|NM_174166.1| Bos taurus retinol dehydrogenase 5 (11-cis and ... 40 9.3
80gb|AF181121.1|AF181121 Homo sapiens chromosome 3 ATP-dependent C... 40 9.3
81gb|AF181120.1|AF181120 Homo sapiens chromosome 3 ATP-dependent C... 40 9.3
82emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from ... 40 9.3
83emb|AL132895.2|CEY59A8A Caenorhabditis elegans YAC Y59A8A, compl... 40 9.3
84ref|NM_175025.2| Mus musculus ATPase, Ca++-sequestering (Atp2c1)... 40 9.3
85gb|BC043706.1| Mus musculus ATPase, Ca++-sequestering, mRNA (cDN... 40 9.3
86gb|BC028139.1| Homo sapiens ATPase, Ca++ transporting, type 2C, ... 40 9.3
87gb|AC141891.3| Mus musculus BAC clone RP23-378A8 from 6, complet... 40 9.3
88emb|AL732614.15| Mouse DNA sequence from clone RP23-322G17 on ch... 40 9.3
89gb|L36533.1|BOV1CRD Bos taurus (clone 21-C3rdh) 11-cis-retinol d... 40 9.3
90gb|M93018.1|RATALTSPLB Rat alternatively spliced mRNA 40 9.3
91gb|M93017.1|RATALTSPLA Rat alternatively spliced mRNA 40 9.3
92emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chr... 40 9.3
93emb|Z48228.1|TVSFGP T.vivax mRNA for surface glycoprotein 40 9.3
94dbj|AB037768.1| Homo sapiens mRNA for KIAA1347 protein, partial cds 40 9.3 
>emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chromosome 6 Contains the
             3' end of the RIOK1 gene for RIO kinase 1 (yeast), a
             hetergeneous riboprotein L (HNRNP L) pseudogene, a
             ribosomal protein S26 pseudogene and a isocitrate
             dehydrogenase 1 (IDH1) pseudogene, complete sequence
          Length = 128320

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 74    aaataaacaacactctcaaaat 95
             ||||||||||||||||||||||
Sbjct: 93436 aaataaacaacactctcaaaat 93415
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>emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chromosome 6 Contains a
             pseudogene similar to hetergeneous riboprotein L (HNRNP
             L), to Ribosomal protein S26, a pseudogene similar to
             isocitrate dehydrogenase (NADP+), STSs and GSSs, complete
             sequence
          Length = 52747

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 74    aaataaacaacactctcaaaat 95
             ||||||||||||||||||||||
Sbjct: 17859 aaataaacaacactctcaaaat 17838
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 87     tctcaaaataaaaatcgagaa 107
              |||||||||||||||||||||
Sbjct: 432257 tctcaaaataaaaatcgagaa 432277
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>gb|AC124365.5| Mus musculus BAC clone RP24-539F12 from chromosome 12, complete
            sequence
          Length = 148952

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 508  ttaattttctgaacctcaata 528
            |||||||||||||||||||||
Sbjct: 3590 ttaattttctgaacctcaata 3570
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>emb|CR792450.4| Zebrafish DNA sequence from clone RP71-15H2, complete sequence
          Length = 76622

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 530   caaaaatctacaccactggta 550
             |||||||||||||||||||||
Sbjct: 18241 caaaaatctacaccactggta 18261
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>gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 map mi398, complete
             sequence
          Length = 96371

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 458   ttgtcttcttttcctccaaaaacaa 482
             |||||||||| ||||||||||||||
Sbjct: 86082 ttgtcttcttatcctccaaaaacaa 86106
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>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20,
              complete sequence
          Length = 151560

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 530    caaaaatctacaccactggta 550
              |||||||||||||||||||||
Sbjct: 148775 caaaaatctacaccactggta 148795
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>gb|AC069552.5|AC069552 Genomic Sequence For Arabidopsis thaliana Clone F17M07 From Chromosome
             V, complete sequence
          Length = 105743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 91    aaaataaaaatcgagaacacacaaa 115
             |||||||||||| ||||||||||||
Sbjct: 30125 aaaataaaaatcaagaacacacaaa 30149
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>dbj|AP002462.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:T8N9
          Length = 36329

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 526   atatcaaaaatctacaccact 546
             |||||||||||||||||||||
Sbjct: 25165 atatcaaaaatctacaccact 25185
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>gb|AC154381.2| Mus musculus BAC clone RP23-42E2 from 16, complete sequence
          Length = 201052

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 631    aaatgaaaagaaattcccttc 651
              |||||||||||||||||||||
Sbjct: 190180 aaatgaaaagaaattcccttc 190200
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>emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in linkage group 20,
              complete sequence
          Length = 176396

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 530    caaaaatctacaccactggta 550
              |||||||||||||||||||||
Sbjct: 123980 caaaaatctacaccactggta 124000
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>gb|AC140487.4| Mus musculus BAC clone RP24-139I9 from chromosome 12, complete sequence
          Length = 164825

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 508    ttaattttctgaacctcaata 528
              |||||||||||||||||||||
Sbjct: 158391 ttaattttctgaacctcaata 158371
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     tgaagctgttccttttgttc 250
               ||||||||||||||||||||
Sbjct: 1333089 tgaagctgttccttttgttc 1333070
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>ref|XM_516748.1| PREDICTED: Pan troglodytes similar to calcium-transporting ATPase 2C1
            isoform 1a; secretory pathway Ca2+/Mn2+ ATPase; ATPase,
            Ca(2+)-sequestering; ATPase 2C1; ATP-dependent Ca(2+)
            pump PMR1; HUSSY-28 (LOC460694), mRNA
          Length = 2903

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1145 tattataccaaaggagtaaa 1126
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>gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, complete sequence
          Length = 193588

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   gttcccatcttgtagatgag 266
             ||||||||||||||||||||
Sbjct: 86165 gttcccatcttgtagatgag 86146
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>ref|NM_131907.2| Rattus norvegicus ATPase, Ca++-sequestering (Atp2c1), mRNA
          Length = 4946

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1298 tattataccaaaggagtaaa 1279
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>gb|AC165358.3| Mus musculus BAC clone RP23-122F14 from chromosome 1, complete sequence
          Length = 223166

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     acactctcaaaataaaaatc 102
              ||||||||||||||||||||
Sbjct: 133966 acactctcaaaataaaaatc 133985
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>ref|XM_416368.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC196394
           (LOC418137), mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  gagcaagaactccactgtca 69
           ||||||||||||||||||||
Sbjct: 509 gagcaagaactccactgtca 490
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>gb|BC043091.1| Mus musculus ATPase, Ca++-sequestering, mRNA (cDNA clone MGC:58010
            IMAGE:6405251), complete cds
          Length = 4854

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1212 tattataccaaaggagtaaa 1193
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>ref|XM_981296.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            11 (Atp2c1), mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1130 tattataccaaaggagtaaa 1111
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>ref|XM_981334.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            3 (Atp2c1), mRNA
          Length = 2649

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1130 tattataccaaaggagtaaa 1111
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>ref|XM_981370.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            6 (Atp2c1), mRNA
          Length = 4762

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1130 tattataccaaaggagtaaa 1111
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>ref|XM_981476.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            12 (Atp2c1), mRNA
          Length = 4765

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1130 tattataccaaaggagtaaa 1111
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>ref|XM_981437.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            9 (Atp2c1), mRNA
          Length = 4759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1130 tattataccaaaggagtaaa 1111
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>ref|XM_981528.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            13 (Atp2c1), mRNA
          Length = 4762

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1130 tattataccaaaggagtaaa 1111
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>ref|XM_981568.1| PREDICTED: Mus musculus ATPase, Ca++-sequestering, transcript variant
            2 (Atp2c1), mRNA
          Length = 4671

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1039 tattataccaaaggagtaaa 1020
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>ref|NM_001001487.1| Homo sapiens ATPase, Ca++ transporting, type 2C, member 1 (ATP2C1),
            transcript variant 2, mRNA
          Length = 3484

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1011 tattataccaaaggagtaaa 992
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>ref|NM_001001486.1| Homo sapiens ATPase, Ca++ transporting, type 2C, member 1 (ATP2C1),
            transcript variant 4, mRNA
          Length = 3514

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1011 tattataccaaaggagtaaa 992
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>ref|NM_014382.2| Homo sapiens ATPase, Ca++ transporting, type 2C, member 1 (ATP2C1),
            transcript variant 1, mRNA
          Length = 4753

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1011 tattataccaaaggagtaaa 992
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>ref|NM_001001485.1| Homo sapiens ATPase, Ca++ transporting, type 2C, member 1 (ATP2C1),
            transcript variant 3, mRNA
          Length = 3389

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1011 tattataccaaaggagtaaa 992
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>ref|XM_846400.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
           2C1 isoform 1a, transcript variant 2 (LOC477066), mRNA
          Length = 4769

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 933 tattataccaaaggagtaaa 914
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>ref|XM_858740.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
           2C1 isoform 1a, transcript variant 12 (LOC477066), mRNA
          Length = 4898

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 939 tattataccaaaggagtaaa 920
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>ref|XM_858720.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
           2C1 isoform 1a, transcript variant 11 (LOC477066), mRNA
          Length = 4769

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 939 tattataccaaaggagtaaa 920
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>ref|XM_858673.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
            2C1 isoform 1a, transcript variant 9 (LOC477066), mRNA
          Length = 3466

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1002 tattataccaaaggagtaaa 983
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>ref|XM_858651.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
            2C1 isoform 1a, transcript variant 8 (LOC477066), mRNA
          Length = 3425

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1056 tattataccaaaggagtaaa 1037
to top
>ref|XM_858626.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
           2C1 isoform 1a, transcript variant 7 (LOC477066), mRNA
          Length = 2763

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 939 tattataccaaaggagtaaa 920
to top
>ref|XM_858605.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
           2C1 isoform 1a, transcript variant 6 (LOC477066), mRNA
          Length = 2526

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 939 tattataccaaaggagtaaa 920
to top
>ref|XM_858586.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
            2C1 isoform 1a, transcript variant 5 (LOC477066), mRNA
          Length = 4892

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1056 tattataccaaaggagtaaa 1037
to top
>ref|XM_858563.1| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
           2C1 isoform 1a, transcript variant 4 (LOC477066), mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 939 tattataccaaaggagtaaa 920
to top
>ref|XM_534262.2| PREDICTED: Canis familiaris similar to calcium-transporting ATPase
            2C1 isoform 1a, transcript variant 1 (LOC477066), mRNA
          Length = 3496

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1002 tattataccaaaggagtaaa 983
to top
>gb|AC117679.8| Mus musculus chromosome 9, clone RP23-435I22, complete sequence
          Length = 213032

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 578   tattataccaaaggagtaaa 597
             ||||||||||||||||||||
Sbjct: 60654 tattataccaaaggagtaaa 60673
to top
>gb|AC166347.2| Mus musculus BAC clone RP24-87G12 from chromosome 6, complete sequence
          Length = 193181

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 586    caaaggagtaaacatccatc 605
              ||||||||||||||||||||
Sbjct: 138537 caaaggagtaaacatccatc 138556
to top
>gb|DQ427109.1| Homo sapiens OTU domain containing 4 (OTUD4) gene, complete cds
          Length = 44241

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    agcatacagttacatgaggagttt 37
             |||||| |||||||||||||||||
Sbjct: 33119 agcatatagttacatgaggagttt 33142
to top
>emb|AL357037.13| Human DNA sequence from clone RP11-383B24 on chromosome 10 Contains the
             3' end of a 44kDA polymerase (RNA) III (DNA directed)
             polypeptide D (POLR3D) pseudogene, the 3' end of the ADK
             gene for adenosine kinase and a novel pseudogene, complete
             sequence
          Length = 165773

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   ctccctatgttacagaggct 150
             ||||||||||||||||||||
Sbjct: 15842 ctccctatgttacagaggct 15823
to top
>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence
          Length = 198781

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ctccctatgttacagaggct 150
             ||||||||||||||||||||
Sbjct: 28069 ctccctatgttacagaggct 28088
to top
>gb|AY268375.1| Homo sapiens secretory pathway Ca2+/Mn2+ transport ATPase SPCA1d
           protein (ATP2C1) mRNA, complete cds, alternatively
           spliced
          Length = 3067

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 960 tattataccaaaggagtaaa 941
to top
>gb|AY268374.1| Homo sapiens secretory pathway Ca2+/Mn2+ transport ATPase SPCA1b
           protein (ATP2C1) mRNA, complete cds, alternatively
           spliced
          Length = 3037

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 960 tattataccaaaggagtaaa 941
to top
>gb|AC055753.21| Homo sapiens 3 BAC RP11-503I22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167662

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    aacactctcaaaataaaaat 101
             ||||||||||||||||||||
Sbjct: 36870 aacactctcaaaataaaaat 36889
to top
>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              4/6
          Length = 282183

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tgaagctgttccttttgttc 250
              ||||||||||||||||||||
Sbjct: 272386 tgaagctgttccttttgttc 272367
to top
>emb|AJ551270.1|MMU551270 Mus musculus mRNA for PMR1/ATP2C1 protein (pmr1 gene)
          Length = 2869

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 828 tattataccaaaggagtaaa 809
to top
>gb|BC086994.1| Rattus norvegicus ATPase, Ca++-sequestering, mRNA (cDNA clone
            MGC:93231 IMAGE:7106233), complete cds
          Length = 4946

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1298 tattataccaaaggagtaaa 1279
to top
>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a
             novel gene and a casein kinase II alpha 1 polypeptide
             (Csnk2a1) pseudogene, complete sequence
          Length = 134053

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ccttttgttcccatcttgta 260
             ||||||||||||||||||||
Sbjct: 96038 ccttttgttcccatcttgta 96019
to top
>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete
              sequence
          Length = 169547

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 460    gtcttcttttcctccaaaaacaac 483
              |||||||||||||||||| |||||
Sbjct: 151836 gtcttcttttcctccaaagacaac 151859
to top
>gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 578   tattataccaaaggagtaaa 597
             ||||||||||||||||||||
Sbjct: 87820 tattataccaaaggagtaaa 87839
to top
>gb|AC022276.35| Homo sapiens 12 BAC RP11-161A14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177505

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 41     aatggggaggagcaagaactccac 64
              ||||||||| ||||||||||||||
Sbjct: 132068 aatggggagcagcaagaactccac 132045
to top
>dbj|AK074692.1| Homo sapiens cDNA FLJ90211 fis, clone MAMMA1002095, highly similar
           to Calcium-transporting ATPase type 2C, member 1 (EC
           3.6.3.8)
          Length = 3106

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 692 tattataccaaaggagtaaa 673
to top
>gb|AC096757.3| Homo sapiens BAC clone RP11-543H9 from 4, complete sequence
          Length = 188464

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     agcatacagttacatgaggagttt 37
              |||||| |||||||||||||||||
Sbjct: 109769 agcatatagttacatgaggagttt 109746
to top
>dbj|AK133703.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched
            library, clone:5430400N03 product:ATPase,
            Ca++-sequestering, full insert sequence
          Length = 3405

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1041 tattataccaaaggagtaaa 1022
to top
>gb|AC023150.5| Homo sapiens BAC clone RP11-709L9 from 4, complete sequence
          Length = 188782

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 243    ttttgttcccatcttgtagatgag 266
              ||||||||||||||| ||||||||
Sbjct: 152584 ttttgttcccatcttatagatgag 152561
to top
>dbj|AK159918.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420037M09 product:ATPase,
            Ca++-sequestering, full insert sequence
          Length = 3557

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1197 tattataccaaaggagtaaa 1178
to top
>dbj|AK163049.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430101M08 product:ATPase,
            Ca++-sequestering, full insert sequence
          Length = 3232

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1092 tattataccaaaggagtaaa 1073
to top
>emb|CR524361.1| Gallus gallus finished cDNA, clone ChEST808f9
          Length = 1008

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  gagcaagaactccactgtca 69
           ||||||||||||||||||||
Sbjct: 232 gagcaagaactccactgtca 213
to top
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete
             sequence
          Length = 96221

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   caaattagtttatatgcttg 195
             ||||||||||||||||||||
Sbjct: 57192 caaattagtttatatgcttg 57211
to top
>emb|CR407391.1| Gallus gallus finished cDNA, clone ChEST812g2
          Length = 839

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  gagcaagaactccactgtca 69
           ||||||||||||||||||||
Sbjct: 494 gagcaagaactccactgtca 475
to top
>emb|BX950760.2| Gallus gallus finished cDNA, clone ChEST813d11
          Length = 943

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  gagcaagaactccactgtca 69
           ||||||||||||||||||||
Sbjct: 486 gagcaagaactccactgtca 467
to top
>ref|NM_075107.2| Caenorhabditis elegans Y59A8A.2 (Y59A8A.2) mRNA, complete cds
          Length = 1945

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 ttctcaggaaaatagtgatg 394
           ||||||||||||||||||||
Sbjct: 207 ttctcaggaaaatagtgatg 226
to top
>dbj|AK028393.1| Mus musculus 18 days pregnant adult female placenta and extra
            embryonic tissue cDNA, RIKEN full-length enriched
            library, clone:3830432C12 product:CALCIUM-TRANSPORTING
            ATPASE TYPE 2C, MEMBER 1 (EC 3.6.3.8) (ATPASE 2C1)
            (ATP-DEPENDENT CA2+ PUMP PMR1) homolog [Rattus
            norvegicus], full insert sequence
          Length = 2410

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1009 tattataccaaaggagtaaa 990
to top
>emb|CR352787.1| Gallus gallus finished cDNA, clone ChEST439i14
          Length = 807

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  gagcaagaactccactgtca 69
           ||||||||||||||||||||
Sbjct: 350 gagcaagaactccactgtca 331
to top
>gb|AC097467.1| Homo sapiens BAC clone RP11-27G13 from 4, complete sequence
          Length = 178204

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ttgttcccatcttgtagatg 264
             ||||||||||||||||||||
Sbjct: 67614 ttgttcccatcttgtagatg 67633
to top
>gb|AC016845.14| Homo sapiens chromosome 11, clone RP11-5E23, complete sequence
          Length = 167727

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   aatttttcagtggcctgcat 171
             ||||||||||||||||||||
Sbjct: 28891 aatttttcagtggcctgcat 28910
to top
>gb|AC063932.14| Homo sapiens 3 BAC RP11-298A18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186897

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 98    aaatcgagaacacacaaaggttcatcac 125
             ||||| |||||||||||||||| |||||
Sbjct: 17661 aaatcaagaacacacaaaggttaatcac 17688
to top
>gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, complete sequence
          Length = 170043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   ctccctatgttacagaggct 150
             ||||||||||||||||||||
Sbjct: 83678 ctccctatgttacagaggct 83659
to top
>gb|AC091582.17| Homo sapiens chromosome 15, clone RP11-483O19, complete sequence
          Length = 90065

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   gtcttcttttcctccaaaaa 479
             ||||||||||||||||||||
Sbjct: 52785 gtcttcttttcctccaaaaa 52766
to top
>gb|AF225981.1|AF225981 Homo sapiens calcium transport ATPase ATP2C1 (ATP2C1) mRNA,
           complete cds
          Length = 3458

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 985 tattataccaaaggagtaaa 966
to top
>gb|AF189723.2|AF189723 Homo sapiens calcium transport ATPase ATP2C1 (ATP2C1A) mRNA,
           complete cds
          Length = 4728

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 985 tattataccaaaggagtaaa 966
to top
>gb|AF230532.1|AF230532 Bos taurus secretory pathway Ca2+ transporting ATPase (SPCA) mRNA,
            complete cds
          Length = 3210

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1024 tattataccaaaggagtaaa 1005
to top
>dbj|AK173154.1| Mus musculus mRNA for mKIAA1347 protein
          Length = 3407

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 819 tattataccaaaggagtaaa 800
to top
>ref|NM_175785.2| Bos taurus ATPase, Ca++ transporting, type 2C, member 1 (ATP2C1),
            mRNA
          Length = 3210

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1024 tattataccaaaggagtaaa 1005
to top
>ref|NM_174166.1| Bos taurus retinol dehydrogenase 5 (11-cis and 9-cis) (RDH5), mRNA
          Length = 1187

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 ctgaagctgttccttttgtt 249
           ||||||||||||||||||||
Sbjct: 50  ctgaagctgttccttttgtt 31
to top
>gb|AF181121.1|AF181121 Homo sapiens chromosome 3 ATP-dependent Ca2+ pump PMR1 (ATP2C1) mRNA,
            alternatively spliced, complete cds
          Length = 3137

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1066 tattataccaaaggagtaaa 1047
to top
>gb|AF181120.1|AF181120 Homo sapiens chromosome 3 ATP-dependent Ca2+ pump PMR1 (ATP2C1) mRNA,
            complete cds
          Length = 3637

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1066 tattataccaaaggagtaaa 1047
to top
>emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from BAC 139I22 map 3q21 region
             D3S3607-D3S1587, complete sequence
          Length = 184983

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 578   tattataccaaaggagtaaa 597
             ||||||||||||||||||||
Sbjct: 65369 tattataccaaaggagtaaa 65388
to top
>emb|AL132895.2|CEY59A8A Caenorhabditis elegans YAC Y59A8A, complete sequence
          Length = 45472

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ttctcaggaaaatagtgatg 394
             ||||||||||||||||||||
Sbjct: 36896 ttctcaggaaaatagtgatg 36915
to top
>ref|NM_175025.2| Mus musculus ATPase, Ca++-sequestering (Atp2c1), mRNA
          Length = 4854

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1212 tattataccaaaggagtaaa 1193
to top
>gb|BC043706.1| Mus musculus ATPase, Ca++-sequestering, mRNA (cDNA clone
            IMAGE:5364638), containing frame-shift errors
          Length = 3607

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1193 tattataccaaaggagtaaa 1174
to top
>gb|BC028139.1| Homo sapiens ATPase, Ca++ transporting, type 2C, member 1, mRNA (cDNA
            clone MGC:39950 IMAGE:5215224), complete cds
          Length = 3439

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1023 tattataccaaaggagtaaa 1004
to top
>gb|AC141891.3| Mus musculus BAC clone RP23-378A8 from 6, complete sequence
          Length = 152261

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 586   caaaggagtaaacatccatc 605
             ||||||||||||||||||||
Sbjct: 22137 caaaggagtaaacatccatc 22118
to top
>emb|AL732614.15| Mouse DNA sequence from clone RP23-322G17 on chromosome 4, complete
              sequence
          Length = 218910

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 505    aagttaattttctgaacctcaata 528
              ||||||||||||||||||| ||||
Sbjct: 117005 aagttaattttctgaacctaaata 116982
to top
>gb|L36533.1|BOV1CRD Bos taurus (clone 21-C3rdh) 11-cis-retinol dehydrogenase mRNA,
           complete cds
          Length = 1187

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 ctgaagctgttccttttgtt 249
           ||||||||||||||||||||
Sbjct: 50  ctgaagctgttccttttgtt 31
to top
>gb|M93018.1|RATALTSPLB Rat alternatively spliced mRNA
          Length = 2909

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 tattataccaaaggagtaaa 597
           ||||||||||||||||||||
Sbjct: 425 tattataccaaaggagtaaa 406
to top
>gb|M93017.1|RATALTSPLA Rat alternatively spliced mRNA
          Length = 4645

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1009 tattataccaaaggagtaaa 990
to top
>emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chromosome 2, complete
              sequence
          Length = 198993

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 626    acccaaaatgaaaagaaatt 645
              ||||||||||||||||||||
Sbjct: 140029 acccaaaatgaaaagaaatt 140048
to top
>emb|Z48228.1|TVSFGP T.vivax mRNA for surface glycoprotein
          Length = 1224

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 90  caaaataaaaatcgagaacacacaaagg 117
           ||||| |||||||||||||||| |||||
Sbjct: 953 caaaagaaaaatcgagaacacagaaagg 980
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>dbj|AB037768.1| Homo sapiens mRNA for KIAA1347 protein, partial cds
          Length = 4075

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  tattataccaaaggagtaaa 597
            ||||||||||||||||||||
Sbjct: 1241 tattataccaaaggagtaaa 1222


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,722,387
Number of Sequences: 3902068
Number of extensions: 8722387
Number of successful extensions: 173151
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 172956
Number of HSP's gapped (non-prelim): 195
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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