ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal22e20 |
|---|---|
| Clone Library Name | barley_pub |
>PROSC_MOUSE (Q9Z2Y8) Proline synthetase co-transcribed bacterial homolog| protein Length = 274 Score = 98.6 bits (244), Expect = 8e-21 Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 3/91 (3%) Frame = -1 Query: 468 VELAKHVKLACPNLILSGLMTIGM--KDYSSTPE-NFKALVNCKLEVCKALGIPTEQFEL 298 + + +H+K +CP+L GLMTIG D S P +F+ L+ + E+C+ LGIP EQ EL Sbjct: 162 IAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGIPVEQVEL 221 Query: 297 SMGMSGDFEQAIELGSTNVRVGSTIFGPREY 205 SMGMS DF+ AIE+GSTNVR+GSTIFG R+Y Sbjct: 222 SMGMSMDFQHAIEVGSTNVRIGSTIFGERDY 252
>PROSC_HUMAN (O94903) Proline synthetase co-transcribed bacterial homolog| protein Length = 275 Score = 97.1 bits (240), Expect = 2e-20 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%) Frame = -1 Query: 468 VELAKHVKLACPNLILSGLMTIGM--KDYSSTPE-NFKALVNCKLEVCKALGIPTEQFEL 298 + + +H+ CPNL GLMTIG D S P +F+ L++ + E+CK L IP +Q EL Sbjct: 162 IAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVEL 221 Query: 297 SMGMSGDFEQAIELGSTNVRVGSTIFGPREY 205 SMGMS DF+ A+E+GSTNVR+GSTIFG R+Y Sbjct: 222 SMGMSADFQHAVEVGSTNVRIGSTIFGERDY 252
>YU68_CAEEL (P52057) Hypothetical UPF0001 protein F09E5.8 in chromosome II| Length = 244 Score = 70.5 bits (171), Expect = 2e-12 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 3/93 (3%) Frame = -1 Query: 465 ELAKHVKLACPNLILSGLMTIGMKDYS-STPEN--FKALVNCKLEVCKALGIPTEQFELS 295 +LA+ ++ C NL G MTIG D S ++ EN F+ L + + G + ELS Sbjct: 152 KLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVRQTWAEQTGESADSVELS 211 Query: 294 MGMSGDFEQAIELGSTNVRVGSTIFGPREYPNQ 196 MGMS DF QAI G+T+VRVGS +FG REY N+ Sbjct: 212 MGMSDDFLQAIHQGATSVRVGSKLFGAREYKNK 244
>YPI1_VIBAL (P52055) Hypothetical UPF0001 protein in pilT-proC intergenic| region (ORF1) Length = 233 Score = 58.5 bits (140), Expect = 9e-09 Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Frame = -1 Query: 435 PNLILSGLMTI--GMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAI 262 PNL L GLM+I + DY S F+ L K + E LSMGMSGD AI Sbjct: 157 PNLTLRGLMSIPANVSDYESQLHEFQKLATLKQTLEAQF---PEIDTLSMGMSGDMTAAI 213 Query: 261 ELGSTNVRVGSTIFGPREY 205 E GST VR+G+ IFG R+Y Sbjct: 214 EAGSTMVRIGTAIFGARDY 232
>Y461_VIBCH (Q9KUQ4) Hypothetical UPF0001 protein VC0461| Length = 236 Score = 55.8 bits (133), Expect = 6e-08 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = -1 Query: 435 PNLILSGLMTI--GMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAI 262 PNL L GLM+I + DY + F L + ++ + + LSMGMSGD + AI Sbjct: 157 PNLTLRGLMSIPENVPDYPAQLAAFTQLAELQQQLAQKY---PQIDTLSMGMSGDMQAAI 213 Query: 261 ELGSTNVRVGSTIFGPREY 205 E GST VR+G+ IFG R+Y Sbjct: 214 EAGSTIVRIGTAIFGERDY 232
>YBD6_YEAST (P38197) Hypothetical UPF0001 protein YBL036c| Length = 257 Score = 53.1 bits (126), Expect = 4e-07 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Frame = -1 Query: 438 CPNLILSGLMTIGMKDYS--STPEN--FKALVNCKLEVCKALGIPTEQFELSMGMSGDFE 271 C + L+GLMTIG + S + EN F LV K ++ G +LSMGMS DF Sbjct: 172 CKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGT---SLKLSMGMSADFR 228 Query: 270 QAIELGSTNVRVGSTIFGPREYPNQ 196 +AI G+ VR+G+ IFG R N+ Sbjct: 229 EAIRQGTAEVRIGTDIFGARPPKNE 253
>Y090_HAEIN (P44506) UPF0001 protein HI0090| Length = 237 Score = 52.0 bits (123), Expect = 9e-07 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%) Frame = -1 Query: 462 LAKHVKLACPNLILSGLMTI-GMKDYSSTPEN-FKALVNCKLEVCKALGIPTEQFE-LSM 292 LAKH++ P+L L GLM I D + EN F+ ++ ++ + L P +Q + LSM Sbjct: 146 LAKHIE-NLPHLCLRGLMAIPAPTDNIAEQENAFRKMLELFEQLKQVL--PNQQIDTLSM 202 Query: 291 GMSGDFEQAIELGSTNVRVGSTIFGPREY 205 GM+ D AI+ GST VR+G+ IFG R Y Sbjct: 203 GMTDDMPSAIKCGSTMVRIGTAIFGARNY 231
>Y274_AQUAE (O66631) Hypothetical UPF0001 protein aq_274| Length = 228 Score = 52.0 bits (123), Expect = 9e-07 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 4/84 (4%) Frame = -1 Query: 444 LACPNLILSGLMTIGMKDYSSTPEN----FKALVNCKLEVCKALGIPTEQFELSMGMSGD 277 L PN+ + GLMTI Y PE+ F+ L + E+ + + LSMGMS D Sbjct: 149 LELPNVKVLGLMTI--PPYLENPEDVRPYFRKLRELRDELQREYNVALPH--LSMGMSHD 204 Query: 276 FEQAIELGSTNVRVGSTIFGPREY 205 FE AIE G+T VR+G+ +FG R+Y Sbjct: 205 FEVAIEEGATIVRIGTLLFGERKY 228
>Y112_PASMU (Q9CPD5) Hypothetical UPF0001 protein PM0112| Length = 233 Score = 51.2 bits (121), Expect = 1e-06 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Frame = -1 Query: 468 VELAKHVKLACPNLILSGLMTI-GMKDYSSTPENFKALVNCKLEVCKALGIPTEQFE-LS 295 ++LAK ++ P+L L GLM I D +T E ++ E K +P Q + LS Sbjct: 144 LDLAKQIQ-NLPHLCLRGLMAIPAPTDDLATQEQAFTQMHSLFEQLKQ-ALPDAQIDTLS 201 Query: 294 MGMSGDFEQAIELGSTNVRVGSTIFGPREY 205 MGM+ D AI+ GST VR+G+ IFG R+Y Sbjct: 202 MGMTDDMASAIQCGSTMVRIGTAIFGARDY 231
>Y394_PSEAE (P24562) Hypothetical UPF0001 protein PA0394| Length = 230 Score = 45.8 bits (107), Expect = 6e-05 Identities = 35/86 (40%), Positives = 46/86 (53%) Frame = -1 Query: 462 LAKHVKLACPNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMS 283 LA+ VK PNL L GLM I ++ +L + LG+ T LSMGMS Sbjct: 145 LAEAVK-QLPNLRLRGLMAIPEPTAERAAQHAAFARLRELLLDLNLGLDT----LSMGMS 199 Query: 282 GDFEQAIELGSTNVRVGSTIFGPREY 205 D E AI G+T VR+G+ +FG R+Y Sbjct: 200 DDLEAAIGEGATWVRIGTALFGARDY 225
>YLME_BACSU (O31727) Hypothetical UPF0001 protein ylmE| Length = 230 Score = 45.4 bits (106), Expect = 8e-05 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = -1 Query: 432 NLILSGLMTIG--MKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAIE 259 +++++GLMT+ D F++L + +V K ELSMGMS DFE AIE Sbjct: 149 HILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQKLNQPNAPCTELSMGMSNDFEIAIE 208 Query: 258 LGSTNVRVGSTIFG 217 G+T +R+GS++ G Sbjct: 209 EGATYIRIGSSLVG 222
>YGGS_ECOLI (P67080) Hypothetical UPF0001 protein yggS| Length = 234 Score = 45.1 bits (105), Expect = 1e-04 Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 8/97 (8%) Frame = -1 Query: 471 GVELAKHVKLAC-----PNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQ 307 G++LA+ +LA P L L GLM I + S F+ V ++ V A G+ T Sbjct: 139 GIQLAELDELAAAVAELPRLRLRGLMAIPAPE-SEYVRQFE--VARQMAVAFA-GLKTRY 194 Query: 306 FE---LSMGMSGDFEQAIELGSTNVRVGSTIFGPREY 205 LS+GMS D E AI GST VR+G+ IFG R+Y Sbjct: 195 PHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDY 231
>YGGS_ECOL6 (P67081) Hypothetical UPF0001 protein yggS| Length = 234 Score = 45.1 bits (105), Expect = 1e-04 Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 8/97 (8%) Frame = -1 Query: 471 GVELAKHVKLAC-----PNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQ 307 G++LA+ +LA P L L GLM I + S F+ V ++ V A G+ T Sbjct: 139 GIQLAELDELAAAVAELPRLRLRGLMAIPAPE-SEYVRQFE--VARQMAVAFA-GLKTRY 194 Query: 306 FE---LSMGMSGDFEQAIELGSTNVRVGSTIFGPREY 205 LS+GMS D E AI GST VR+G+ IFG R+Y Sbjct: 195 PHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDY 231
>YGGS_ECO57 (P67082) Hypothetical UPF0001 protein yggS| Length = 234 Score = 45.1 bits (105), Expect = 1e-04 Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 8/97 (8%) Frame = -1 Query: 471 GVELAKHVKLAC-----PNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQ 307 G++LA+ +LA P L L GLM I + S F+ V ++ V A G+ T Sbjct: 139 GIQLAELDELAAAVAELPRLRLRGLMAIPAPE-SEYVRQFE--VARQMAVAFA-GLKTRY 194 Query: 306 FE---LSMGMSGDFEQAIELGSTNVRVGSTIFGPREY 205 LS+GMS D E AI GST VR+G+ IFG R+Y Sbjct: 195 PHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDY 231
>Y556_SYNY3 (P52056) Hypothetical UPF0001 protein slr0556| Length = 218 Score = 42.4 bits (98), Expect = 7e-04 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = -1 Query: 303 ELSMGMSGDFEQAIELGSTNVRVGSTIFGPR 211 ELSMGMSGD+ +AI G+T +R+G+ +FG R Sbjct: 187 ELSMGMSGDYPEAIAAGATMIRLGTILFGDR 217
>Y919_MYCLE (Q9CCE2) Hypothetical UPF0001 protein ML0919| Length = 257 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/73 (39%), Positives = 40/73 (54%) Frame = -1 Query: 432 NLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAIELG 253 +L L GLM G+ P+ +A +LE + L + LS GMS DFE A++ G Sbjct: 183 SLELVGLM--GIPPLGWNPD--QAFEQLRLEHRRVLRSHPDAIGLSAGMSNDFEIAVKHG 238 Query: 252 STNVRVGSTIFGP 214 ST VRVG+ + GP Sbjct: 239 STCVRVGTALLGP 251
>Y395_HELPY (O25156) Hypothetical UPF0001 protein HP0395| Length = 222 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 9/94 (9%) Frame = -1 Query: 474 KGVELAKHVKLACPNLILSGLMTIGM---------KDYSSTPENFKALVNCKLEVCKALG 322 + +E+ + C +L L GLM IG K + +T + F + N + Sbjct: 141 EALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV------- 193 Query: 321 IPTEQFELSMGMSGDFEQAIELGSTNVRVGSTIF 220 LSMGMS DFE AI G+ +R+GS +F Sbjct: 194 -------LSMGMSDDFELAIACGANLLRIGSFLF 220
>Y395_HELPJ (Q9ZKF2) Hypothetical UPF0001 protein jhp_0986| Length = 222 Score = 41.2 bits (95), Expect = 0.002 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 9/94 (9%) Frame = -1 Query: 474 KGVELAKHVKLACPNLILSGLMTIGM---------KDYSSTPENFKALVNCKLEVCKALG 322 + +E + C L L GLM IG K +++T + F + N + Sbjct: 141 EALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTTTKKLFDQIKNASV------- 193 Query: 321 IPTEQFELSMGMSGDFEQAIELGSTNVRVGSTIF 220 LSMGMS DFE AI G+ +R+GS +F Sbjct: 194 -------LSMGMSDDFELAIACGANLLRIGSFLF 220
>Y2172_MYCBO (P67084) Hypothetical UPF0001 protein Mb2172c| Length = 258 Score = 38.5 bits (88), Expect = 0.010 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -1 Query: 300 LSMGMSGDFEQAIELGSTNVRVGSTIFGPR 211 LS GMS D E A++ GST VRVG+ + GPR Sbjct: 224 LSAGMSNDLEVAVKHGSTCVRVGTALLGPR 253
>Y2148_MYCTU (P67083) Hypothetical UPF0001 protein Rv2148c/MT2207| Length = 258 Score = 38.5 bits (88), Expect = 0.010 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -1 Query: 300 LSMGMSGDFEQAIELGSTNVRVGSTIFGPR 211 LS GMS D E A++ GST VRVG+ + GPR Sbjct: 224 LSAGMSNDLEVAVKHGSTCVRVGTALLGPR 253
>Y1368_DEIRA (Q9RUL6) Hypothetical UPF0001 protein DR1368| Length = 209 Score = 37.7 bits (86), Expect = 0.017 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -1 Query: 303 ELSMGMSGDFEQAIELGSTNVRVGSTIF 220 ELSMGMSGD+ A+ G+T VRVG ++F Sbjct: 181 ELSMGMSGDYPLAVAAGATLVRVGRSLF 208
>Y2153_CORGL (O24748) Hypothetical UPF0001 protein Cgl2153/cg2364| Length = 221 Score = 36.2 bits (82), Expect = 0.048 Identities = 19/31 (61%), Positives = 21/31 (67%) Frame = -1 Query: 303 ELSMGMSGDFEQAIELGSTNVRVGSTIFGPR 211 E S GMSGD AI+ GST VRVG+ I G R Sbjct: 188 EFSAGMSGDLVAAIKHGSTIVRVGTEILGNR 218
>IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 481 Score = 31.6 bits (70), Expect = 1.2 Identities = 25/79 (31%), Positives = 39/79 (49%) Frame = -1 Query: 438 CPNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAIE 259 C I++G +GM S A+ NC +EV IP + + SGD +A+ Sbjct: 300 CTTRIVAG---VGMPQVS-------AIDNC-VEVASKFDIPVIA-DGGIRYSGDVAKALA 347 Query: 258 LGSTNVRVGSTIFGPREYP 202 LG+++V +GS + G E P Sbjct: 348 LGASSVMIGSLLAGTEESP 366
>IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 481 Score = 31.6 bits (70), Expect = 1.2 Identities = 25/79 (31%), Positives = 39/79 (49%) Frame = -1 Query: 438 CPNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAIE 259 C I++G +GM S A+ NC +EV IP + + SGD +A+ Sbjct: 300 CTTRIVAG---VGMPQVS-------AIDNC-VEVASKFDIPVIA-DGGIRYSGDVAKALA 347 Query: 258 LGSTNVRVGSTIFGPREYP 202 LG+++V +GS + G E P Sbjct: 348 LGASSVMIGSLLAGTEESP 366
>PURA_NEIMB (Q9K012) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 408 TIGMKDYSSTPENFKALVNCKLEVCKA 328 T G+KDY + PEN KA + EVC A Sbjct: 384 TFGVKDYGALPENAKAYLKRIEEVCGA 410
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 29.6 bits (65), Expect = 4.5 Identities = 20/48 (41%), Positives = 23/48 (47%) Frame = -1 Query: 465 ELAKHVKLACPNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALG 322 E A K++CP L +GL IG KD P NF CK VC G Sbjct: 827 EKASQPKVSCP-LCKTGL-NIGSKD----PPNFNTCTECKKVVCNLCG 868
>Y497_BUCBP (Q89A48) Hypothetical UPF0001 protein bbp_497| Length = 223 Score = 29.6 bits (65), Expect = 4.5 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -1 Query: 300 LSMGMSGDFEQAIELGSTNVRVGSTIF 220 +S+G S D + A+ GST +R+GS+IF Sbjct: 195 VSLGTSHDIQAALYSGSTLLRIGSSIF 221
>YAD4_SCHPO (Q09830) Hypothetical protein C4G8.04 in chromosome I| Length = 772 Score = 29.6 bits (65), Expect = 4.5 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +2 Query: 212 LGPNIVDPTLTF-VLPSSIACSKSPDIPMDSSNCSVGIPRALQTSSLQFTSALK 370 L P+ + P L L +++ S S D+P D ++ S + SSL+ TS+LK Sbjct: 185 LSPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSSLK 238
>IMDH_SHIFL (P0ADG9) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 29.3 bits (64), Expect = 5.9 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 345 LEVCKALGIPTEQFELSMGMSGDFEQAIELGSTNVRVGSTIFGPREYPNQ 196 +E + GIP + + SGD +AI G++ V VGS + G E P + Sbjct: 325 VEALEGTGIPVIA-DGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGE 373
>IMDH_ECOLI (P0ADG7) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 29.3 bits (64), Expect = 5.9 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 345 LEVCKALGIPTEQFELSMGMSGDFEQAIELGSTNVRVGSTIFGPREYPNQ 196 +E + GIP + + SGD +AI G++ V VGS + G E P + Sbjct: 325 VEALEGTGIPVIA-DGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGE 373
>IMDH_ECO57 (P0ADG8) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 29.3 bits (64), Expect = 5.9 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 345 LEVCKALGIPTEQFELSMGMSGDFEQAIELGSTNVRVGSTIFGPREYPNQ 196 +E + GIP + + SGD +AI G++ V VGS + G E P + Sbjct: 325 VEALEGTGIPVIA-DGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGE 373
>THF1_SYNSC (Q3AJN7) Protein thf1| Length = 215 Score = 28.9 bits (63), Expect = 7.7 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 10/65 (15%) Frame = -1 Query: 420 SGLMTIGMKDY------SSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGD----FE 271 S LM +G+ +T + +A+V E+ + LG+PT++ E + + G + Sbjct: 126 SRLMAVGLMSLLKAAAADATDSDTEAIVKQSKELAEGLGLPTDRVEKDLTLFGSNSERMD 185 Query: 270 QAIEL 256 QA+EL Sbjct: 186 QAVEL 190
>IMDH_ACICA (P31002) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 28.9 bits (63), Expect = 7.7 Identities = 24/81 (29%), Positives = 37/81 (45%) Frame = -1 Query: 438 CPNLILSGLMTIGMKDYSSTPENFKALVNCKLEVCKALGIPTEQFELSMGMSGDFEQAIE 259 C I++G IGM S+ AL + ++ + GIP SGD +AI Sbjct: 304 CTTRIVAG---IGMPQISAIDSVASALKD-QIPLIADGGIP---------FSGDMAKAIG 350 Query: 258 LGSTNVRVGSTIFGPREYPNQ 196 G++ + VGS + G E P + Sbjct: 351 AGASTIMVGSLLAGTEEAPGE 371 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,924,306 Number of Sequences: 219361 Number of extensions: 1283660 Number of successful extensions: 3384 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3335 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3381 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
