ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal22e20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463741.1| Oryza sativa (japonica cultivar-group), predic... 226 5e-56
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
3dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4ref|NM_118820.2| Arabidopsis thaliana pyridoxal phosphate bindin... 98 3e-17
5gb|AF375405.1| Arabidopsis thaliana AT4g26860/F10M23_200 mRNA, c... 98 3e-17
6gb|AY066052.1| Arabidopsis thaliana AT4g26860/F10M23_200 mRNA, c... 98 3e-17
7emb|BX829131.1|CNS0A3E9 Arabidopsis thaliana Full-length cDNA Co... 98 3e-17
8gb|AY084753.1| Arabidopsis thaliana clone 11679 mRNA, complete s... 98 3e-17
9gb|BT013081.1| Lycopersicon esculentum clone 114338F, mRNA sequence 90 8e-15
10ref|NM_179318.1| Arabidopsis thaliana pyridoxal phosphate bindin... 64 5e-07
11emb|BX815330.1|CNS0ABBG Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
12emb|AJ441305.1|OSA441305 Oryza sativa partial mRNA for putative ... 62 2e-06
13gb|AY109697.1| Zea mays CL14781_1 mRNA sequence 62 2e-06
14emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, ... 60 7e-06
15emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, B... 60 7e-06
16gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
17gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, com... 50 0.007
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
19gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 48 0.027
20gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 48 0.027
21gb|AC096775.5| Homo sapiens BAC clone RP11-350C21 from 7, comple... 44 0.42
22gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete s... 42 1.7
23gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, com... 42 1.7
24gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, comp... 42 1.7
25gb|AC109818.5| Homo sapiens BAC clone RP11-293F1 from 4, complet... 42 1.7
26gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, comple... 42 1.7
27emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, com... 42 1.7
28dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12,... 42 1.7
29dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.7
30emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chro... 42 1.7
31dbj|AP000433.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 1.7
32ref|XM_742541.1| Aspergillus fumigatus Af293 glucose inhibited d... 40 6.6
33gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosom... 40 6.6
34gb|AC122839.4| Mus musculus BAC clone RP23-193K9 from 8, complet... 40 6.6
35gb|AC116110.7| Mus musculus chromosome 6, clone RP23-19B12, comp... 40 6.6
36emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in l... 40 6.6
37gb|AC091699.6| Homo sapiens chromosome 10 clone RP11-296D9, comp... 40 6.6
38gb|AC022026.7| Homo sapiens chromosome 10 clone RP11-506B4, comp... 40 6.6
39gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hos... 40 6.6
40gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 40 6.6
41gb|AC106728.6| Homo sapiens 3 BAC RP11-319J24 (Roswell Park Canc... 40 6.6
42gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, comp... 40 6.6
43emb|BX004983.8| Zebrafish DNA sequence from clone DKEY-7F3, comp... 40 6.6
44gb|AC154712.2| Mus musculus BAC clone RP24-359J22 from 16, compl... 40 6.6
45emb|BX000467.10| Zebrafish DNA sequence from clone CH211-1K7 in ... 40 6.6
46dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.6
47gb|AC110118.8| Rattus norvegicus BAC CH230-310N6 (Children's Ho... 40 6.6
48gb|AC153990.2| Mus musculus 6 BAC RP24-293L1 (Roswell Park Cance... 40 6.6
49emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chro... 40 6.6
50gb|AC163389.2| Mus musculus chromosome 1, clone RP23-397E23, com... 40 6.6 
>ref|XM_463741.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1047

 Score =  226 bits (114), Expect = 5e-56
 Identities = 183/206 (88%)
 Strand = Plus / Minus

                                                                       
Query: 265 cgcttgctcaaagtcaccagacattcccatggacagttcaaactgttctgtcggtatacc 324
           ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |
Sbjct: 402 cgcttgctcaaagtcaccagacattcccatggagagttcaaactgttctgccggcatatc 343

                                                                       
Query: 325 gagggccttgcaaacctcaagcttacagtttaccagtgccttaaaattctctggcgttga 384
            | |||||| ||||| ||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 342 aatggccttacaaacttcaagtttacaatttaccagtgccttaaaattttctggtgttga 283

                                                                       
Query: 385 ggagtaatctttcattcctattgtcatgagtcctgacagtattaagtttgggcaagctag 444
           |||||| ||||||||||||||||||||||| ||||| | ||||| || |||||| |||| 
Sbjct: 282 ggagtagtctttcattcctattgtcatgagacctgaaaatattaggtgtgggcatgctaa 223

                                     
Query: 445 tttcacatgcttagcaagctccacgc 470
            ||||||||||| |||||||| ||||
Sbjct: 222 cttcacatgcttggcaagctcgacgc 197
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 2e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                            
Query: 265      cgcttgctcaaagtcaccagacattcccatggacagttcaaactgttctgtcggtatacc 324
                ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |
Sbjct: 41860076 cgcttgctcaaagtcaccagacattcccatggagagttcaaactgttctgccggcatatc 41860135

                                                         
Query: 325      gagggccttgcaaacctcaagcttacagtttaccagtgcct 365
                 | |||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 41860136 aatggccttacaaacttcaagtttacaatttaccagtgcct 41860176



 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                            
Query: 363      ccttaaaattctctggcgttgaggagtaatctttcattcctattgtcatgagtcctgaca 422
                |||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 41860250 ccttaaaattttctggtgttgaggagtagtctttcattcctattgtcatgagacctgaaa 41860309

                                                                
Query: 423      gtattaagtttgggcaagctagtttcacatgcttagcaagctccacgc 470
                 ||||| || |||||| ||||  ||||||||||| |||||||| ||||
Sbjct: 41860310 atattaggtgtgggcatgctaacttcacatgcttggcaagctcgacgc 41860357



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                            
Query: 193      cttttggttcggatactcccttggtccgaatattgttgacccaaccctcacatttgtgct 252
                ||||| ||| ||||||||||||||||| || || |||||||||| ||||||| |||||||
Sbjct: 41859866 ctttttgtttggatactcccttggtccaaaaatagttgacccaatcctcacacttgtgct 41859925

                     
Query: 253      gccca 257
                 ||||
Sbjct: 41859926 accca 41859930
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>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1147A04
          Length = 150053

 Score =  121 bits (61), Expect = 2e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                          
Query: 265    cgcttgctcaaagtcaccagacattcccatggacagttcaaactgttctgtcggtatacc 324
              ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |
Sbjct: 103452 cgcttgctcaaagtcaccagacattcccatggagagttcaaactgttctgccggcatatc 103511

                                                       
Query: 325    gagggccttgcaaacctcaagcttacagtttaccagtgcct 365
               | |||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 103512 aatggccttacaaacttcaagtttacaatttaccagtgcct 103552



 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                          
Query: 363    ccttaaaattctctggcgttgaggagtaatctttcattcctattgtcatgagtcctgaca 422
              |||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 103626 ccttaaaattttctggtgttgaggagtagtctttcattcctattgtcatgagacctgaaa 103685

                                                              
Query: 423    gtattaagtttgggcaagctagtttcacatgcttagcaagctccacgc 470
               ||||| || |||||| ||||  ||||||||||| |||||||| ||||
Sbjct: 103686 atattaggtgtgggcatgctaacttcacatgcttggcaagctcgacgc 103733



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 193    cttttggttcggatactcccttggtccgaatattgttgacccaaccctcacatttgtgct 252
              ||||| ||| ||||||||||||||||| || || |||||||||| ||||||| |||||||
Sbjct: 103242 ctttttgtttggatactcccttggtccaaaaatagttgacccaatcctcacacttgtgct 103301

                   
Query: 253    gccca 257
               ||||
Sbjct: 103302 accca 103306
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>ref|NM_118820.2| Arabidopsis thaliana pyridoxal phosphate binding AT4G26860 mRNA,
           complete cds
          Length = 997

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgcccagttctatc 265
           ||||| ||||||||||| || || || |||||||||||||| ||||| ||||  || |||
Sbjct: 773 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctcaatc 714

                                                    
Query: 266 gcttgctcaaagtcaccagacattcccatggacagttcaaa 306
           ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 713 gctagctcgaagtcaccagacatgcccatggacagttcaaa 673
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>gb|AF375405.1| Arabidopsis thaliana AT4g26860/F10M23_200 mRNA, complete cds
          Length = 922

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgcccagttctatc 265
           ||||| ||||||||||| || || || |||||||||||||| ||||| ||||  || |||
Sbjct: 748 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctcaatc 689

                                                    
Query: 266 gcttgctcaaagtcaccagacattcccatggacagttcaaa 306
           ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 688 gctagctcgaagtcaccagacatgcccatggacagttcaaa 648
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>gb|AY066052.1| Arabidopsis thaliana AT4g26860/F10M23_200 mRNA, complete cds
          Length = 735

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgcccagttctatc 265
           ||||| ||||||||||| || || || |||||||||||||| ||||| ||||  || |||
Sbjct: 716 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctcaatc 657

                                                    
Query: 266 gcttgctcaaagtcaccagacattcccatggacagttcaaa 306
           ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 656 gctagctcgaagtcaccagacatgcccatggacagttcaaa 616
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>emb|BX829131.1|CNS0A3E9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZC03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 938

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgcccagttctatc 265
           ||||| ||||||||||| || || || |||||||||||||| ||||| ||||  || |||
Sbjct: 833 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctcaatc 774

                                                    
Query: 266 gcttgctcaaagtcaccagacattcccatggacagttcaaa 306
           ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 773 gctagctcgaagtcaccagacatgcccatggacagttcaaa 733
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>gb|AY084753.1| Arabidopsis thaliana clone 11679 mRNA, complete sequence
          Length = 940

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgcccagttctatc 265
           ||||| ||||||||||| || || || |||||||||||||| ||||| ||||  || |||
Sbjct: 774 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctcaatc 715

                                                    
Query: 266 gcttgctcaaagtcaccagacattcccatggacagttcaaa 306
           ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 714 gctagctcgaagtcaccagacatgcccatggacagttcaaa 674
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>gb|BT013081.1| Lycopersicon esculentum clone 114338F, mRNA sequence
          Length = 1202

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 203 ggatactcccttggtccgaatattgttgacccaaccctcacatttgtgctgcccagttct 262
           ||||||||||| ||||| ||||| ||||| ||||  |||||||| |||||||||| ||||
Sbjct: 764 ggatactccctaggtccaaatatggttgatccaattctcacattggtgctgcccatttct 705

                                                
Query: 263 atcgcttgctcaaagtcaccagacattcccatggaca 299
           |||||| |||| ||||||| |||||| ||||| ||||
Sbjct: 704 atcgctagctcgaagtcactagacatgcccattgaca 668
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>ref|NM_179318.1| Arabidopsis thaliana pyridoxal phosphate binding AT1G11930
           transcript variant AT1G11930.2 mRNA, complete cds
          Length = 1057

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 239 ctcacatttgtgctgcccagttctatcgcttgctcaaagtcaccagacattcccat 294
           |||||||||||||| |||||||| || ||| | ||||||||||||||||| |||||
Sbjct: 770 ctcacatttgtgcttcccagttcaattgctagttcaaagtcaccagacatccccat 715
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>emb|BX815330.1|CNS0ABBG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS52ZE03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1262

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 239  ctcacatttgtgctgcccagttctatcgcttgctcaaagtcaccagacattcccat 294
            |||||||||||||| |||||||| || ||| | ||||||||||||||||| |||||
Sbjct: 1136 ctcacatttgtgcttcccagttcaattgctagttcaaagtcaccagacatccccat 1081
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>emb|AJ441305.1|OSA441305 Oryza sativa partial mRNA for putative proline synthetase
           associated protein
          Length = 660

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 357 ccagtgccttaaaattctctggcgttgaggagtaatctttcattcctattgtcat 411
           |||||||||| ||||||||||| ||||||||||||||   ||| |||||||||||
Sbjct: 553 ccagtgccttgaaattctctggagttgaggagtaatcaagcatccctattgtcat 499
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>gb|AY109697.1| Zea mays CL14781_1 mRNA sequence
          Length = 769

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                       
Query: 221 aatattgttgacccaaccctcacatttgtgctgcccagttctatcgcttgctcaaagtca 280
           ||||| ||||||||||| || ||||||||||| |||| ||| |||||||| ||||| |||
Sbjct: 253 aatatggttgacccaactcttacatttgtgcttcccatttcaatcgcttgttcaaaatca 312

                              
Query: 281 ccagacattcccatggaca 299
            | ||||| ||||| ||||
Sbjct: 313 gccgacatgcccatagaca 331
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>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66
          Length = 198372

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 265  cgcttgctcaaagtcaccagacattcccatggacagttcaaa 306
            |||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 7356 cgctagctcgaagtcaccagacatgcccatggacagttcaaa 7397



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 206  tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgccca 257
            ||||| ||||||||||| || || || |||||||||||||| ||||| ||||
Sbjct: 7165 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttccca 7216
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>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
          Length = 128574

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 265   cgcttgctcaaagtcaccagacattcccatggacagttcaaa 306
             |||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 51513 cgctagctcgaagtcaccagacatgcccatggacagttcaaa 51554



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 206   tactcccttggtccgaatattgttgacccaaccctcacatttgtgctgccca 257
             ||||| ||||||||||| || || || |||||||||||||| ||||| ||||
Sbjct: 51322 tactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttccca 51373
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>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04,
             complete sequence
          Length = 88812

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 363   ccttaaaattctctggcgttgaggagtaatctttcattcctattgtcat 411
             |||| ||||||||||| ||||||||||||||   ||| |||||||||||
Sbjct: 81101 ccttgaaattctctggagttgaggagtaatcaagcatccctattgtcat 81149



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 265   cgcttgctcaaagtcaccagacattcccatggacagttcaaactg 309
             |||||||||||| ||| ||||||| ||||| ||||||||| ||||
Sbjct: 80920 cgcttgctcaaaatcagcagacatgcccatagacagttcacactg 80964
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>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence
          Length = 140234

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 265   cgcttgctcaaagtcaccagacattcccatggacagttcaaactg 309
             |||||||||||| ||| ||||||| ||||| ||||||||| ||||
Sbjct: 64978 cgcttgctcaaaatcagcagacatgcccatagacagttcacactg 64934



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 363   ccttaaaattctctggcgttgaggagtaatctttcattcctattgtcat 411
             |||| ||||||||||| ||||||||||||||   ||| |||||||||||
Sbjct: 64797 ccttgaaattctctggagttgaggagtaatcaagcatccctattgtcat 64749
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                
Query: 363     ccttaaaattctctggcgttgaggagtaatctttcattcctattgtcat 411
               |||| ||||||||||| ||||||||||||||   ||| |||||||||||
Sbjct: 2802775 ccttgaaattctctggagttgaggagtaatcaagcatccctattgtcat 2802823



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 265     cgcttgctcaaagtcaccagacattcccatggacagttcaaactg 309
               |||||||||||| ||| ||||||| ||||| ||||||||| ||||
Sbjct: 2802594 cgcttgctcaaaatcagcagacatgcccatagacagttcacactg 2802638
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 105    tgtacatttcttttgagacaacat 128
              ||||||||||||||||||||||||
Sbjct: 460656 tgtacatttcttttgagacaacat 460633
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 105    tgtacatttcttttgagacaacat 128
              ||||||||||||||||||||||||
Sbjct: 392878 tgtacatttcttttgagacaacat 392855
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>gb|AC096775.5| Homo sapiens BAC clone RP11-350C21 from 7, complete sequence
          Length = 99452

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 68    tatttacatgtacatttacatg 89
             ||||||||||||||||||||||
Sbjct: 66616 tatttacatgtacatttacatg 66637
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>gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete sequence
          Length = 162172

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   tttcttttgagacaacataca 131
             |||||||||||||||||||||
Sbjct: 87649 tttcttttgagacaacataca 87629
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>gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, complete sequence
          Length = 134242

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     aaacatcagatatttacatgt 78
              |||||||||||||||||||||
Sbjct: 108747 aaacatcagatatttacatgt 108727
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>gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, complete sequence
          Length = 129469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    aaacatcagatatttacatgt 78
             |||||||||||||||||||||
Sbjct: 87148 aaacatcagatatttacatgt 87168
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>gb|AC109818.5| Homo sapiens BAC clone RP11-293F1 from 4, complete sequence
          Length = 40149

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 65    agatatttacatgtacatttacatg 89
             ||||||||||||||| |||||||||
Sbjct: 15765 agatatttacatgtaaatttacatg 15741
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>gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, complete sequence
          Length = 177787

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    tatttacatgtacatttacat 88
             |||||||||||||||||||||
Sbjct: 10285 tatttacatgtacatttacat 10265
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>emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, complete sequence
          Length = 206371

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 64    cagatatttacatgtacatttacat 88
             ||||||||||||| |||||||||||
Sbjct: 62486 cagatatttacatttacatttacat 62462
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>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete
             sequences
          Length = 202014

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    atatttacatgtacatttaca 87
             |||||||||||||||||||||
Sbjct: 30114 atatttacatgtacatttaca 30094
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>dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, section 19/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     atatttacatgtacatttaca 87
              |||||||||||||||||||||
Sbjct: 156737 atatttacatgtacatttaca 156717
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>emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chromosome 4, complete
              sequence
          Length = 251930

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 56     ctaaacatcagatatttacat 76
              |||||||||||||||||||||
Sbjct: 155597 ctaaacatcagatatttacat 155577
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>dbj|AP000433.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B67B5,
             LL56-APP region, complete sequence
          Length = 57399

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    atatttacatgtacatttaca 87
             |||||||||||||||||||||
Sbjct: 43794 atatttacatgtacatttaca 43774
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>ref|XM_742541.1| Aspergillus fumigatus Af293 glucose inhibited division protein A
            (Afu6g04440) partial mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  ggttcggatactcccttggt 217
            ||||||||||||||||||||
Sbjct: 1400 ggttcggatactcccttggt 1381
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>gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosome 6, complete sequence
          Length = 195925

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     tttatggaaatctatgtttctaaa 60
              ||||||||||| ||||||||||||
Sbjct: 172667 tttatggaaatttatgtttctaaa 172644
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>gb|AC122839.4| Mus musculus BAC clone RP23-193K9 from 8, complete sequence
          Length = 177322

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gtctcctttatggaaatcta 50
             ||||||||||||||||||||
Sbjct: 64772 gtctcctttatggaaatcta 64753
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>gb|AC116110.7| Mus musculus chromosome 6, clone RP23-19B12, complete sequence
          Length = 182667

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ctttaattctgcttttggtt 201
              ||||||||||||||||||||
Sbjct: 138573 ctttaattctgcttttggtt 138554
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>emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in linkage group 21, complete
              sequence
          Length = 263757

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     atttacatgtacatttacat 88
              ||||||||||||||||||||
Sbjct: 219188 atttacatgtacatttacat 219207
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>gb|AC091699.6| Homo sapiens chromosome 10 clone RP11-296D9, complete sequence
          Length = 196856

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    caaccctcacatttgtgctg 253
              ||||||||||||||||||||
Sbjct: 155240 caaccctcacatttgtgctg 155259
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>gb|AC022026.7| Homo sapiens chromosome 10 clone RP11-506B4, complete sequence
          Length = 170834

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   caaccctcacatttgtgctg 253
             ||||||||||||||||||||
Sbjct: 39404 caaccctcacatttgtgctg 39423
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>gb|AC121223.5| Rattus norvegicus  BAC CH230-70M4 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 263147

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 109    catttcttttgagacaacatacaatgta 136
              ||||||||||||||||| || |||||||
Sbjct: 111414 catttcttttgagacaagattcaatgta 111387
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>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ttctaaacatcagatattta 73
             ||||||||||||||||||||
Sbjct: 17586 ttctaaacatcagatattta 17567
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>gb|AC106728.6| Homo sapiens 3 BAC RP11-319J24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193623

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tatttacatgtacatttaca 87
             ||||||||||||||||||||
Sbjct: 14526 tatttacatgtacatttaca 14507
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>gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, complete sequence
          Length = 154078

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 58     aaacatcagatatttacatgtacattta 85
              ||||| |||||||||||||||| |||||
Sbjct: 124371 aaacaccagatatttacatgtatattta 124398
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>emb|BX004983.8| Zebrafish DNA sequence from clone DKEY-7F3, complete sequence
          Length = 234489

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     atttacatgtacatttacat 88
              ||||||||||||||||||||
Sbjct: 164192 atttacatgtacatttacat 164211
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>gb|AC154712.2| Mus musculus BAC clone RP24-359J22 from 16, complete sequence
          Length = 144031

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    atttacatgtacatttacat 88
             ||||||||||||||||||||
Sbjct: 64865 atttacatgtacatttacat 64846
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>emb|BX000467.10| Zebrafish DNA sequence from clone CH211-1K7 in linkage group 19,
             complete sequence
          Length = 120440

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    agatatttacatgtacatttacat 88
             |||||||||||| |||||||||||
Sbjct: 62241 agatatttacatttacatttacat 62264
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>dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete
             sequence
          Length = 163025

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tgtttctaaacatcagatat 70
             ||||||||||||||||||||
Sbjct: 87201 tgtttctaaacatcagatat 87220
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>gb|AC110118.8| Rattus norvegicus  BAC CH230-310N6 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 175663

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 109   catttcttttgagacaacatacaatgta 136
             ||||||||||||||||| || |||||||
Sbjct: 22594 catttcttttgagacaagattcaatgta 22567
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>gb|AC153990.2| Mus musculus 6 BAC RP24-293L1 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172768

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ctttaattctgcttttggtt 201
              ||||||||||||||||||||
Sbjct: 166886 ctttaattctgcttttggtt 166905
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>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete
              sequence
          Length = 179832

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     tttacatgtacatttacatgccat 93
              ||||||||||||||| ||||||||
Sbjct: 130851 tttacatgtacatttgcatgccat 130828
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>gb|AC163389.2| Mus musculus chromosome 1, clone RP23-397E23, complete sequence
          Length = 203933

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     ttctaaacatcagatattta 73
              ||||||||||||||||||||
Sbjct: 149108 ttctaaacatcagatattta 149089


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,581,625
Number of Sequences: 3902068
Number of extensions: 4581625
Number of successful extensions: 99030
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98877
Number of HSP's gapped (non-prelim): 153
length of query: 489
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 467
effective length of database: 17,147,199,772
effective search space: 8007742293524
effective search space used: 8007742293524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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