>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1|
          Length = 355

 Score =  102 bits (255), Expect = 8e-22
 Identities = 52/79 (65%), Positives = 59/79 (74%)
 Frame = -3

Query: 429 PQFMGMAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVD 250
           P  M    DREARV RYREK+KMR+FEKTIRYASRKAYAE RPRIKGRFAK+ D D E +
Sbjct: 277 PAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEAN 336

Query: 249 QYFSAAALSDSSCGVVPTF 193
           Q FS     D+  G+VP+F
Sbjct: 337 QAFSTMITFDTGYGIVPSF 355

>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2|
          Length = 347

 Score =  100 bits (249), Expect = 4e-21
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = -3

Query: 408 MDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAA 229
           M+REARV RYREK+K R+F+KTIRYASRKAYAE RPRIKGRFAKR + + E ++ FS + 
Sbjct: 276 MEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSL 335

Query: 228 LSDSSCGVVPTF 193
           +S++  G+VP+F
Sbjct: 336 MSETGYGIVPSF 347

>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5|
          Length = 355

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = -3

Query: 447 TAAHTSPQFMGMAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 268
           T++ T       +MDREARV RYREKRK R+FEKTIRYASRKAYAE+RPRIKGRFAKR +
Sbjct: 270 TSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329

Query: 267 A---DLEVDQYFSAAALSDSSCGVVPTF 193
               D+ +   +++AA   +  GVVPTF
Sbjct: 330 TENDDIFLSHVYASAA--HAQYGVVPTF 355

>CONS_ARATH (Q39057) Zinc finger protein CONSTANS|
          Length = 373

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = -3

Query: 408 MDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAA 229
           MDREARV RYREKRK R+FEKTIRYASRKAYAE RPR+ GRFAKR + + E +Q F+   
Sbjct: 304 MDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EIEAE-EQGFNTML 361

Query: 228 LSDSSCGVVPTF 193
           + ++  G+VP+F
Sbjct: 362 MYNTGYGIVPSF 373

>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4|
          Length = 362

 Score = 86.7 bits (213), Expect = 6e-17
 Identities = 47/71 (66%), Positives = 51/71 (71%)
 Frame = -3

Query: 405 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAAL 226
           +REARV RYREKRK R+FEKTIRYASRKAYAE RPRIKGRFAKR D +   D        
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIF 353

Query: 225 SDSSCGVVPTF 193
             S  G+VPTF
Sbjct: 354 --SGFGLVPTF 362

>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3|
          Length = 294

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 40/47 (85%), Positives = 43/47 (91%)
 Frame = -3

Query: 405 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           +REARV RYREKRK R+FEKTIRYASRKAYAE RPRIKGRFAKR D+
Sbjct: 228 EREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274

>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14|
          Length = 402

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 441 AHTSPQFMGMAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 268
           A T+     MA +R+  + RY+EK+K RR++KTIRY +RKA AETR R+KGRF K  D
Sbjct: 344 AVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401

>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRA 271
           REARV RYREKR+ R F K IRY  RK  AE RPR+KGRF KRA
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 404

>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6|
          Length = 406

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
 Frame = -3

Query: 441 AHTSPQFMGMAMD--------REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGR 286
           AH    F G+ +         REARV RYREKR+ R F K IRY  RK  AE RPR+KGR
Sbjct: 336 AHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGR 395

Query: 285 FAKRA 271
           F KR+
Sbjct: 396 FVKRS 400

>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13|
          Length = 332

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -3

Query: 411 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 268
           +++R + + RY+EK+K RR+EK IRY SRK  AE+R RI+GRFAK AD
Sbjct: 284 SLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331

>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15|
          Length = 433

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = -3

Query: 414 MAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           +A +R   + RY+EKRK RR++KTIRY SRKA A+TR R++GRF K ++A
Sbjct: 381 LAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASEA 430

>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8|
          Length = 313

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 405 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRA 271
           +REARV RYR+KRK R FEK IRY  RK  A+ RPR+KGRF +R+
Sbjct: 264 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 308

>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7|
          Length = 392

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 405 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKR 274
           +REARV RY+EKR+ R F K IRY  RK  AE RPRIKGRF KR
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387

>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9|
          Length = 372

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = -3

Query: 411 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           ++ R   V RY+EK+K R+F+K +RYASRKA A+ R R+KGRF K  +A
Sbjct: 312 SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360

>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73|
           (Pseudo-response regulator 73) (OsPRR73)
          Length = 767

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQ 247
           REA ++++R+KRK+R F K +RY SRK  AE RPRI+G+F +++  + +  Q
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQ 763

>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10|
          Length = 373

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -3

Query: 411 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           A  R   V RY+EK+K R+F+K +RY SRK  A+ R R+KGRF K  +A
Sbjct: 313 ATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEA 361

>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95|
           (Pseudo-response regulator 95) (OsPRR95)
          Length = 623

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 26/59 (44%), Positives = 37/59 (62%)
 Frame = -3

Query: 450 STAAHTSPQFMGMAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKR 274
           S     +P  +     REA ++++R KRK R FEK +RY SRK  AE RPR+KG+F ++
Sbjct: 558 SNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616

>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12|
          Length = 337

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -3

Query: 384 RYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           RY+EK+  R F K IRYASRKA A+TR R+KGRF K  D+
Sbjct: 286 RYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDS 325

>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5|
           (Pseudo-response regulator 5)
          Length = 558

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = -3

Query: 411 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           ++ REA + ++R KRK R +EK +RY SRK  AE RPRIKG+F ++  +
Sbjct: 506 SLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 554

>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADAD 262
           REA + ++R KRK R F+K +RY SRK  AE RPR+KG+F +  ++D
Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463

>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7|
           (Pseudo-response regulator 7)
          Length = 727

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 23/46 (50%), Positives = 33/46 (71%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 265
           REA + ++R+KRK R F K +RY SRK  AE RPR++G+F ++  A
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAA 714

>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37|
           (Pseudo-response regulator 37) (OsPRR37)
          Length = 742

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADAD 262
           R A V ++R+KRK R F K +RY SRK  AE RPR++G+F ++A  D
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQD 728

>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11|
          Length = 330

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 268
           R+    RY++K+  R F K IRYASRKA A+TR R+KGRF K  +
Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGE 320

>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3|
           (Pseudo-response regulator 3)
          Length = 495

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 268
           REA + ++R KRK R FEK +RY SRK  AE RP +KG+F ++ D
Sbjct: 442 REAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRD 486

>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1|
           (Pseudo-response regulator 1) (OsPRR1)
          Length = 518

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 268
           R A + ++R KRK R F+K +RY +RK  AETRPR++G+F ++A+
Sbjct: 443 RAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQAN 487

>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1|
           (Pseudo-response regulator 1) (Timing of CAB expression
           1) (ABI3-interacting protein 1)
          Length = 618

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKR 274
           RE  + ++R KR  R F+K IRY +RK  AE RPR+KG+F ++
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 575

>GAT27_ARATH (Q8GXL7) GATA transcription factor 27 (ZIM-like 1 protein)|
          Length = 297

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRF--AKRADAD 262
           R A + R+REKRK R F+KTIRY  RK  A    R KG+F  AK ++ D
Sbjct: 143 RLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDD 191

>GAT25_ARATH (Q8H1G0) GATA transcription factor 25 (ZIM-like 2 protein)|
          Length = 302

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRF 283
           R A + R+REKRK R F+K IRY  RK  A    R KG+F
Sbjct: 147 RLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQF 186

>GAT26_ARATH (Q9LRH6) GATA transcription factor 26 (ZIM protein)|
          Length = 309

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = -3

Query: 402 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRF--------AKRADADLEVDQ 247
           R   + R+R+KR  R FEK +RY  R+  A    R KG+F        A  +  D +  Q
Sbjct: 146 RAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQ 205

Query: 246 YFSAAALSDSSCGV 205
             +   +S + CG+
Sbjct: 206 DDAHPEISCTHCGI 219

>PURA1_PHOLL (Q7N8D4) Adenylosuccinate synthetase 1 (EC 6.3.4.4) (IMP--aspartate|
           ligase 1) (AdSS 1) (AMPSase 1)
          Length = 419

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 190 GRLGGETMSVPPSMVDRSTPACWLALLNLPNILNFTGGIKASPVNTKYSIMERCQIVLCL 11
           G L G    +P S+  ++   C  AL++LP ++     IK   +++   I  RC IVL L
Sbjct: 45  GNLRGSFSQLPASLNKKNLYICQGALISLPILVKEIDFIKKEDIDSHIFIDPRCHIVLPL 104

Query: 10  Y 8
           +
Sbjct: 105 H 105

>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 405 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGR 286
           DR+ R H Y E+R+ RR   +  Y SR+  + +R R +G+
Sbjct: 54  DRQPRSHSY-ERRRRRRSSSSSSYGSRRKRSRSRSRGRGK 92

>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 405 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGR 286
           DR+ R H Y E+R+ RR   +  Y SR+  + +R R +G+
Sbjct: 54  DRQLRSHSY-ERRRRRRSSSSSSYGSRRKRSRSRSRGRGK 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,171,831
Number of Sequences: 219361
Number of extensions: 1121620
Number of successful extensions: 3413
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3409
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)