| Clone Name | rbaal22c17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3145 Score = 628 bits (317), Expect = e-177 Identities = 533/605 (88%) Strand = Plus / Minus Query: 150 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 209 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 2907 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2848 Query: 210 taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 269 |||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||| | Sbjct: 2847 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2788 Query: 270 gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 329 ||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2787 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2728 Query: 330 caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 389 |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| |||| Sbjct: 2727 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2668 Query: 390 cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 449 ||||||| |||||||||| || || |||||||||||||||| ||||||||||||||| | Sbjct: 2667 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2608 Query: 450 gagccagtaacttccgaacattggctacatttccaggaatgtccgaggtagcttgaagag 509 || | |||||||| |||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 2607 gaccaagtaacttttgaacgttagcaacatttccagggatgtctgatgtagcttgaagag 2548 Query: 510 caaaccacttgcttacaaccaaataatcttgctgccatttgttatagaagtccaaaaggg 569 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 2547 caaaccacttgcttacaaccaaataatcatgctgccatttgttatagaagtccagaaggg 2488 Query: 570 catcctcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcgg 629 || ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 2487 tgtcatcacgaacttggcctggattttgagacaatgctgctagtgcagcaaactgctccg 2428 Query: 630 tcatgttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattca 689 |||||||||||||||||||||| ||| ||||||||||||||| || || ||||||| Sbjct: 2427 tcatgttagtagcagacttgtattcaacaaatgcaagttcagtggtgtccggttcattca 2368 Query: 690 gggatgcaagataagcgagacatgtatttttcaacgcacggcgagccacgctatcatggt 749 | |||||||||||||| || ||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 2367 gagatgcaagataagcaaggcatgtgtttttcaatgcacggcgggccatgctatcatggt 2308 Query: 750 taaat 754 ||||| Sbjct: 2307 taaat 2303
>dbj|AK066773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081C24, full insert sequence Length = 2519 Score = 628 bits (317), Expect = e-177 Identities = 533/605 (88%) Strand = Plus / Minus Query: 150 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 209 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 2325 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2266 Query: 210 taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 269 |||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||| | Sbjct: 2265 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2206 Query: 270 gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 329 ||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2205 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2146 Query: 330 caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 389 |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| |||| Sbjct: 2145 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2086 Query: 390 cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 449 ||||||| |||||||||| || || |||||||||||||||| ||||||||||||||| | Sbjct: 2085 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2026 Query: 450 gagccagtaacttccgaacattggctacatttccaggaatgtccgaggtagcttgaagag 509 || | |||||||| |||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 2025 gaccaagtaacttttgaacgttagcaacatttccagggatgtctgatgtagcttgaagag 1966 Query: 510 caaaccacttgcttacaaccaaataatcttgctgccatttgttatagaagtccaaaaggg 569 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1965 caaaccacttgcttacaaccaaataatcatgctgccatttgttatagaagtccagaaggg 1906 Query: 570 catcctcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcgg 629 || ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 1905 tgtcatcacgaacttggcctggattttgagacaatgctgctagtgcagcaaactgctccg 1846 Query: 630 tcatgttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattca 689 |||||||||||||||||||||| ||| ||||||||||||||| || || ||||||| Sbjct: 1845 tcatgttagtagcagacttgtattcaacaaatgcaagttcagtggtgtccggttcattca 1786 Query: 690 gggatgcaagataagcgagacatgtatttttcaacgcacggcgagccacgctatcatggt 749 | |||||||||||||| || ||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 1785 gagatgcaagataagcaaggcatgtgtttttcaatgcacggcgggccatgctatcatggt 1726 Query: 750 taaat 754 ||||| Sbjct: 1725 taaat 1721
>dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L14, full insert sequence Length = 3181 Score = 628 bits (317), Expect = e-177 Identities = 533/605 (88%) Strand = Plus / Minus Query: 150 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 209 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 2943 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2884 Query: 210 taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 269 |||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||| | Sbjct: 2883 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2824 Query: 270 gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 329 ||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2823 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2764 Query: 330 caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 389 |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| |||| Sbjct: 2763 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2704 Query: 390 cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 449 ||||||| |||||||||| || || |||||||||||||||| ||||||||||||||| | Sbjct: 2703 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2644 Query: 450 gagccagtaacttccgaacattggctacatttccaggaatgtccgaggtagcttgaagag 509 || | |||||||| |||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 2643 gaccaagtaacttttgaacgttagcaacatttccagggatgtctgatgtagcttgaagag 2584 Query: 510 caaaccacttgcttacaaccaaataatcttgctgccatttgttatagaagtccaaaaggg 569 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 2583 caaaccacttgcttacaaccaaataatcatgctgccatttgttatagaagtccagaaggg 2524 Query: 570 catcctcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcgg 629 || ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 2523 tgtcatcacgaacttggcctggattttgagacaatgctgctagtgcagcaaactgctccg 2464 Query: 630 tcatgttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattca 689 |||||||||||||||||||||| ||| ||||||||||||||| || || ||||||| Sbjct: 2463 tcatgttagtagcagacttgtattcaacaaatgcaagttcagtggtgtccggttcattca 2404 Query: 690 gggatgcaagataagcgagacatgtatttttcaacgcacggcgagccacgctatcatggt 749 | |||||||||||||| || ||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 2403 gagatgcaagataagcaaggcatgtgtttttcaatgcacggcgggccatgctatcatggt 2344 Query: 750 taaat 754 ||||| Sbjct: 2343 taaat 2339
>gb|AY105426.1| Zea mays PCO146438 mRNA sequence Length = 3165 Score = 496 bits (250), Expect = e-137 Identities = 490/570 (85%) Strand = Plus / Minus Query: 185 ttttcagagagtccattggctgagataatcatctccaactgggccttagcaagagcttgt 244 ||||| ||||| |||||||| || | |||||||||| |||||||||||||||||||||| Sbjct: 2981 ttttcggagagcccattggccgacacgatcatctccagctgggccttagcaagagcttgt 2922 Query: 245 ctcgtctcgtcatatctcctccatcgagagaatgctgacaccatgcgggatgccacctga 304 || |||| ||| || | |||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct: 2921 ctggtcttgtcgtaccgcctccaccgagaaaatgctgaaaccatgcgggaggccacctga 2862 Query: 305 ggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaaccatct 364 || ||||| ||||| ||||| ||||| | ||||||||||||||||| |||||||||||| Sbjct: 2861 gggtttatcttgtcaagctgcaaaacgatctcacccaagaacttgtacccagaaccatct 2802 Query: 365 ttcgcgtgaaaactcacaggtgacccacaaaagcctccaattaaagagtataccttgttc 424 |||||||| || |||||||||| ||||| || || || |||| ||||| |||||||| Sbjct: 2801 ttcgcgtggaagttcacaggtgagccacagaatcccccgattagtgagtacaccttgttg 2742 Query: 425 ggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattggctacatttcca 484 ||||||| || ||| |||||||| |||| ||| | |||| ||||||| || ||||||||| Sbjct: 2741 ggattcctcaggtcgaaagcagggtgagacagcagcttctgaacatttgcaacatttcca 2682 Query: 485 ggaatgtccgaggtagcttgaagagcaaaccacttgcttacaaccaaataatcttgctgc 544 ||||| || || ||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 2681 ggaatctctgaagtagcttgaagagcaaaccacttgcttacaaccaagtattcatgctgc 2622 Query: 545 catttgttatagaagtccaaaagggcatcctcacggacttgacctggattttgagacaat 604 || ||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2621 cacttgttatagaaatccaagagggcatcatcacgaacttggcctggattttgggataat 2562 Query: 605 gctgctaatgcagcaaactgctcggtcatgttagtagcagacttgtactcatttaatgca 664 ||||||||||||||||||||||| ||||||||||| |||||||||||||||| | |||| Sbjct: 2561 gctgctaatgcagcaaactgctctgtcatgttagtcgcagacttgtactcatgcagtgca 2502 Query: 665 agttcagtgacatctggctcattcagggatgcaagataagcgagacatgtatttttcaac 724 || ||| || |||||||||||||| || ||||| || || || ||||||||||| || Sbjct: 2501 agctcaacgaaatctggctcattcaatgacgcaaggtatgcaaggcatgtattttttaat 2442 Query: 725 gcacggcgagccacgctatcatggttaaat 754 ||||||||||||| ||||||||||||||| Sbjct: 2441 gcacggcgagccatactatcatggttaaat 2412
>gb|BT024073.1| Zea mays clone EL01N0507C07 mRNA sequence Length = 2068 Score = 492 bits (248), Expect = e-136 Identities = 485/564 (85%) Strand = Plus / Minus Query: 191 gagagtccattggctgagataatcatctccaactgggccttagcaagagcttgtctcgtc 250 ||||| |||||||| || | |||||||||| |||||||||||||||||||||||| ||| Sbjct: 1849 gagagcccattggccgacacgatcatctccagctgggccttagcaagagcttgtctggtc 1790 Query: 251 tcgtcatatctcctccatcgagagaatgctgacaccatgcgggatgccacctgaggattt 310 | ||| || | |||||| ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 1789 ttgtcgtaccgcctccaccgagaaaatgctgaaaccatgcgggaggccacctgagggttt 1730 Query: 311 attttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaaccatctttcgcg 370 || ||||| ||||| ||||| | ||||||||||||||||| |||||||||||||||||| Sbjct: 1729 atcttgtcaagctgcaaaacgatctcacccaagaacttgtacccagaaccatctttcgcg 1670 Query: 371 tgaaaactcacaggtgacccacaaaagcctccaattaaagagtataccttgttcggattc 430 || || |||||||||| ||||| || || || |||| ||||| |||||||| |||||| Sbjct: 1669 tggaagttcacaggtgagccacagaatcccccgattagtgagtacaccttgttgggattc 1610 Query: 431 cgcatgtcaaaagcaggatgagccagtaacttccgaacattggctacatttccaggaatg 490 | || ||| |||||||| |||| ||| | |||| ||||||| || |||||||||||||| Sbjct: 1609 ctcaggtcgaaagcagggtgagacagcagcttctgaacatttgcaacatttccaggaatc 1550 Query: 491 tccgaggtagcttgaagagcaaaccacttgcttacaaccaaataatcttgctgccatttg 550 || || ||||||||||||||||||||||||||||||||||| || || |||||||| ||| Sbjct: 1549 tctgaagtagcttgaagagcaaaccacttgcttacaaccaagtattcatgctgccacttg 1490 Query: 551 ttatagaagtccaaaagggcatcctcacggacttgacctggattttgagacaatgctgct 610 |||||||| ||||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 1489 ttatagaaatccaagagggcatcatcacgaacttggcctggattttgggataatgctgct 1430 Query: 611 aatgcagcaaactgctcggtcatgttagtagcagacttgtactcatttaatgcaagttca 670 ||||||||||||||||| ||||||||||| |||||||||||||||| | |||||| ||| Sbjct: 1429 aatgcagcaaactgctctgtcatgttagtcgcagacttgtactcatgcagtgcaagctca 1370 Query: 671 gtgacatctggctcattcagggatgcaagataagcgagacatgtatttttcaacgcacgg 730 || |||||||||||||| || ||||| || || || ||||||||||| || |||||| Sbjct: 1369 acgaaatctggctcattcaatgacgcaaggtatgcaaggcatgtattttttaatgcacgg 1310 Query: 731 cgagccacgctatcatggttaaat 754 ||||||| ||||||||||||||| Sbjct: 1309 cgagccatactatcatggttaaat 1286
>emb|AJ234438.1|HVU234438 Hordeum vulgare partial mRNA; clone cMWG0721 Length = 376 Score = 371 bits (187), Expect = 2e-99 Identities = 187/187 (100%) Strand = Plus / Plus Query: 575 tcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcggtcatg 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 tcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcggtcatg 83 Query: 635 ttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattcagggat 694 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 ttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattcagggat 143 Query: 695 gcaagataagcgagacatgtatttttcaacgcacggcgagccacgctatcatggttaaat 754 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 gcaagataagcgagacatgtatttttcaacgcacggcgagccacgctatcatggttaaat 203 Query: 755 acataag 761 ||||||| Sbjct: 204 acataag 210 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 556 gaagtccaaaagggcatcctcac 578 ||||||||||||||||||||||| Sbjct: 25 gaagtccaaaagggcatcctcac 3
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 204 bits (103), Expect = 3e-49 Identities = 160/179 (89%) Strand = Plus / Plus Query: 527 accaaataatcttgctgccatttgttatagaagtccaaaagggcatcctcacggacttga 586 ||||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 28167075 accaaataatcatgctgccatttgttatagaagtccagaagggtgtcatcacgaacttgg 28167134 Query: 587 cctggattttgagacaatgctgctaatgcagcaaactgctcggtcatgttagtagcagac 646 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 28167135 cctggattttgagacaatgctgctagtgcagcaaactgctccgtcatgttagtagcagac 28167194 Query: 647 ttgtactcatttaatgcaagttcagtgacatctggctcattcagggatgcaagataagc 705 ||||| ||| ||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 28167195 ttgtattcaacaaatgcaagttcagtggtgtccggttcattcagagatgcaagataagc 28167253 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 299 acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 358 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28166653 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 28166712 Query: 359 ccatctttcgcgtgaaaactcacaggtgacccacaaaagcctccaatta 407 |||||||| || || ||| ||||||| ||||||||||| |||||||||| Sbjct: 28166713 ccatcttttgcatggaaattcacaggggacccacaaaatcctccaatta 28166761 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 414 ataccttgttcggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattgg 473 |||||||||||||||||| ||||||||||||||| ||| | |||||||| |||| || | Sbjct: 28166842 ataccttgttcggattcctcatgtcaaaagcagggtgaccaagtaacttttgaacgttag 28166901 Query: 474 ctacatttccaggaatgtccgaggtagcttgaagagcaaaccacttgcttacaacc 529 | ||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 28166902 caacatttccagggatgtctgatgtagcttgaagagcaaaccacttgcttacaacc 28166957 Score = 93.7 bits (47), Expect = 8e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 228 ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 287 ||||||||||||||||||| |||| ||||||| |||||| |||||||| |||||||||| Sbjct: 28166495 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 28166554 Query: 288 tgcgggatgccacct 302 ||||||| ||||||| Sbjct: 28166555 tgcgggaggccacct 28166569 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 710 catgtatttttcaacgcacggcgagccacgctatcatggttaaat 754 ||||| |||||||| |||||||| |||| |||||||||||||||| Sbjct: 28167345 catgtgtttttcaatgcacggcgggccatgctatcatggttaaat 28167389 Score = 42.1 bits (21), Expect = 2.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 150 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 209 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 28166340 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 28166399 Query: 210 taatcatctccaactgggcct 230 |||||||||| ||| |||| Sbjct: 28166400 cgatcatctccagctgagcct 28166420
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 204 bits (103), Expect = 3e-49 Identities = 160/179 (89%) Strand = Plus / Plus Query: 527 accaaataatcttgctgccatttgttatagaagtccaaaagggcatcctcacggacttga 586 ||||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 50548 accaaataatcatgctgccatttgttatagaagtccagaagggtgtcatcacgaacttgg 50607 Query: 587 cctggattttgagacaatgctgctaatgcagcaaactgctcggtcatgttagtagcagac 646 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 50608 cctggattttgagacaatgctgctagtgcagcaaactgctccgtcatgttagtagcagac 50667 Query: 647 ttgtactcatttaatgcaagttcagtgacatctggctcattcagggatgcaagataagc 705 ||||| ||| ||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 50668 ttgtattcaacaaatgcaagttcagtggtgtccggttcattcagagatgcaagataagc 50726 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 299 acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 358 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 50126 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 50185 Query: 359 ccatctttcgcgtgaaaactcacaggtgacccacaaaagcctccaatta 407 |||||||| || || ||| ||||||| ||||||||||| |||||||||| Sbjct: 50186 ccatcttttgcatggaaattcacaggggacccacaaaatcctccaatta 50234 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 414 ataccttgttcggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattgg 473 |||||||||||||||||| ||||||||||||||| ||| | |||||||| |||| || | Sbjct: 50315 ataccttgttcggattcctcatgtcaaaagcagggtgaccaagtaacttttgaacgttag 50374 Query: 474 ctacatttccaggaatgtccgaggtagcttgaagagcaaaccacttgcttacaacc 529 | ||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 50375 caacatttccagggatgtctgatgtagcttgaagagcaaaccacttgcttacaacc 50430 Score = 93.7 bits (47), Expect = 8e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 228 ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 287 ||||||||||||||||||| |||| ||||||| |||||| |||||||| |||||||||| Sbjct: 49968 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 50027 Query: 288 tgcgggatgccacct 302 ||||||| ||||||| Sbjct: 50028 tgcgggaggccacct 50042 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 710 catgtatttttcaacgcacggcgagccacgctatcatggttaaat 754 ||||| |||||||| |||||||| |||| |||||||||||||||| Sbjct: 50818 catgtgtttttcaatgcacggcgggccatgctatcatggttaaat 50862 Score = 42.1 bits (21), Expect = 2.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 150 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 209 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 49813 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 49872 Query: 210 taatcatctccaactgggcct 230 |||||||||| ||| |||| Sbjct: 49873 cgatcatctccagctgagcct 49893
>ref|NM_105053.3| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770 transcript variant AT1G63770.1 mRNA, complete cds Length = 3229 Score = 46.1 bits (23), Expect = 0.17 Identities = 68/83 (81%) Strand = Plus / Minus Query: 281 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 340 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2811 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2752 Query: 341 aagaacttgtaaccagaaccatc 363 |||||||||||||| || ||||| Sbjct: 2751 aagaacttgtaacctgatccatc 2729 Score = 44.1 bits (22), Expect = 0.67 Identities = 34/38 (89%) Strand = Plus / Minus Query: 524 acaaccaaataatcttgctgccatttgttatagaagtc 561 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2564 acaaccaagtaatcgtcctgccacttgttatagaagtc 2527
>gb|BT010361.1| Arabidopsis thaliana At1g63770 mRNA, complete cds Length = 2652 Score = 46.1 bits (23), Expect = 0.17 Identities = 68/83 (81%) Strand = Plus / Minus Query: 281 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 340 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2519 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2460 Query: 341 aagaacttgtaaccagaaccatc 363 |||||||||||||| || ||||| Sbjct: 2459 aagaacttgtaacctgatccatc 2437 Score = 44.1 bits (22), Expect = 0.67 Identities = 34/38 (89%) Strand = Plus / Minus Query: 524 acaaccaaataatcttgctgccatttgttatagaagtc 561 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2276 acaaccaagtaatcgtcctgccacttgttatagaagtc 2239
>gb|AY960336.1| Arabidopsis thaliana M1 aminopeptidase mRNA, complete cds, alternatively spliced Length = 3051 Score = 46.1 bits (23), Expect = 0.17 Identities = 68/83 (81%) Strand = Plus / Minus Query: 281 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 340 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2747 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2688 Query: 341 aagaacttgtaaccagaaccatc 363 |||||||||||||| || ||||| Sbjct: 2687 aagaacttgtaacctgatccatc 2665 Score = 44.1 bits (22), Expect = 0.67 Identities = 34/38 (89%) Strand = Plus / Minus Query: 524 acaaccaaataatcttgctgccatttgttatagaagtc 561 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2504 acaaccaagtaatcgtcctgccacttgttatagaagtc 2467
>gb|BT002074.1| Arabidopsis thaliana putative aminopeptidase (At1g63770) mRNA, complete cds Length = 3056 Score = 46.1 bits (23), Expect = 0.17 Identities = 68/83 (81%) Strand = Plus / Minus Query: 281 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 340 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2749 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2690 Query: 341 aagaacttgtaaccagaaccatc 363 |||||||||||||| || ||||| Sbjct: 2689 aagaacttgtaacctgatccatc 2667 Score = 44.1 bits (22), Expect = 0.67 Identities = 34/38 (89%) Strand = Plus / Minus Query: 524 acaaccaaataatcttgctgccatttgttatagaagtc 561 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2506 acaaccaagtaatcgtcctgccacttgttatagaagtc 2469
>ref|NM_202354.1| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770 transcript variant AT1G63770.2 mRNA, complete cds Length = 3331 Score = 44.1 bits (22), Expect = 0.67 Identities = 34/38 (89%) Strand = Plus / Minus Query: 524 acaaccaaataatcttgctgccatttgttatagaagtc 561 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2564 acaaccaagtaatcgtcctgccacttgttatagaagtc 2527 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 tcacccaagaacttgtaaccagaaccatc 363 |||||||||||||||||||| || ||||| Sbjct: 2753 tcacccaagaacttgtaacctgatccatc 2725
>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3, complete sequence Length = 94749 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 cttgtaaccagaaccatctttc 367 |||||||||||||||||||||| Sbjct: 49323 cttgtaaccagaaccatctttc 49302
>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191886 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 655 atttaatgcaagttcagtgac 675 ||||||||||||||||||||| Sbjct: 116620 atttaatgcaagttcagtgac 116640
>gb|AC095014.1| Drosophila melanogaster, chromosome 3R, region 83F-84A, BAC clone BACR19D23, complete sequence Length = 170801 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 gaagagcaaaccacttgctta 524 ||||||||||||||||||||| Sbjct: 43001 gaagagcaaaccacttgctta 42981
>gb|AC095013.1| Drosophila melanogaster, chromosome 3R, region 83F-83F, BAC clone BACR19I14, complete sequence Length = 175648 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 gaagagcaaaccacttgctta 524 ||||||||||||||||||||| Sbjct: 174694 gaagagcaaaccacttgctta 174674
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence Length = 429825 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 gaagagcaaaccacttgctta 524 ||||||||||||||||||||| Sbjct: 347769 gaagagcaaaccacttgctta 347789
>emb|BX817670.1|CNS0AE3V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 654 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 tcacccaagaacttgtaaccagaaccatc 363 |||||||||||||||||||| || ||||| Sbjct: 187 tcacccaagaacttgtaacctgatccatc 159
>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence, complete sequence Length = 87575 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 tcacccaagaacttgtaaccagaaccatc 363 |||||||||||||||||||| || ||||| Sbjct: 10530 tcacccaagaacttgtaacctgatccatc 10502
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 aaataatcttgctgccatttg 550 ||||||||||||||||||||| Sbjct: 4832963 aaataatcttgctgccatttg 4832983
>gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10 of 118 of the complete sequence Length = 298020 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 gaagagcaaaccacttgctta 524 ||||||||||||||||||||| Sbjct: 228838 gaagagcaaaccacttgctta 228818
>gb|AC001652.1|AC001652 Drosophila melanogaster DNA sequence (P1 DS00004 (D12)), complete sequence Length = 85757 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 gaagagcaaaccacttgctta 524 ||||||||||||||||||||| Sbjct: 82057 gaagagcaaaccacttgctta 82037 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,698,542 Number of Sequences: 3902068 Number of extensions: 6698542 Number of successful extensions: 133205 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133094 Number of HSP's gapped (non-prelim): 111 length of query: 761 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 738 effective length of database: 17,143,297,704 effective search space: 12651753705552 effective search space used: 12651753705552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)