ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal22c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
2dbj|AK103370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 3e-86
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
4dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6gb|AY105821.1| Zea mays PCO142874 mRNA sequence 125 2e-25
7dbj|AK063524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
8gb|AY111183.1| Zea mays CL21530_1 mRNA sequence 105 2e-19
9ref|XM_483631.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
10dbj|AK070009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
11gb|BT016877.1| Zea mays clone Contig710 mRNA sequence 60 1e-05
12gb|AY105878.1| Zea mays PCO080240 mRNA sequence 60 1e-05
13dbj|AK103732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
15dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
16ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 ... 48 0.037
17gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) ... 48 0.037
18gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) ... 48 0.037
19emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Co... 48 0.037
20emb|AJ234533.1|HVU234533 Hordeum vulgare genomic DNA fragment; c... 46 0.15
21ref|NM_187863.1| Oryza sativa (japonica cultivar-group), Ozsa830... 44 0.58
22gb|AC005249.2| Homo sapiens BAC clone GS1-115J1 from 7, complete... 44 0.58
23gb|AC145519.1| Pan troglodytes BAC clone RP43-32M13 from 7, comp... 44 0.58
24emb|BX248332.14| Zebrafish DNA sequence from clone CH211-212O2 i... 44 0.58
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
26dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
27gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, ... 44 0.58
28ref|NM_117243.3| Arabidopsis thaliana SAY1 AT4G11740 (SAY1) mRNA... 42 2.3
29emb|BX936280.10| Platypus DNA sequence from clone XX-452D13, com... 42 2.3
30gb|AC104471.6| Homo sapiens 3 BAC RP11-80B17 (Roswell Park Cance... 42 2.3
31dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 2.3
32gb|AY064650.1| Arabidopsis thaliana unknown protein mRNA, comple... 42 2.3
33gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, compl... 42 2.3
34gb|AY042788.1| Arabidopsis thaliana Unknown protein (T5C23.170) ... 42 2.3
35emb|BX827865.1|CNS0A2Z0 Arabidopsis thaliana Full-length cDNA Co... 42 2.3
36gb|AC007336.6| Homo sapiens chromosome 16 clone RP11-212I21, com... 42 2.3
37dbj|AB007767.1| Arabidopsis thaliana SAY1 mRNA for Ara4-interact... 42 2.3
38gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 9.0
39gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome ... 40 9.0
40ref|XM_610832.2| PREDICTED: Bos taurus hypothetical LOC532320 (L... 40 9.0
41gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, co... 40 9.0
42gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, c... 40 9.0
43gb|AC147095.2| Pan troglodytes BAC clone RP43-51E22 from 7, comp... 40 9.0
44gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Canc... 40 9.0
45gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.0
46gb|AC073109.2| Homo sapiens BAC clone RP11-502P9 from 7, complet... 40 9.0
47gb|BC057048.1| Mus musculus sema domain, immunoglobulin domain (... 40 9.0
48ref|NM_019272.1| Rattus norvegicus sema domain, immunoglobulin d... 40 9.0
49gb|AC126793.13| Medicago truncatula clone mth2-17m16, complete s... 40 9.0
50gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 9.0
51emb|AL358815.12| Human DNA sequence from clone RP11-526J3 on chr... 40 9.0
52emb|AL137008.9| Human DNA sequence from clone RP3-361I14 on chro... 40 9.0
53gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswel... 40 9.0
54emb|AL021394.10|HS237J2 Human DNA sequence from clone RP1-237J2 ... 40 9.0
55emb|X13057.1|GGP53 Chicken mRNA for nuclear oncoprotein p53 40 9.0
56emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ... 40 9.0
57emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, ... 40 9.0
58emb|AL049500.1|ATT5C23 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.0
59emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.0
60emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 i... 40 9.0
61gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell ... 40 9.0
62gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete s... 40 9.0
63gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequ... 40 9.0
64dbj|AB236777.1| Trifolium pratense RNA for putative HEAT SHOCK P... 40 9.0
65gb|AC108720.3| Homo sapiens 12 BAC RP11-251C23 (Roswell Park Can... 40 9.0
66gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, co... 40 9.0
67dbj|AK143196.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 9.0
68gb|AC079071.9| Homo sapiens chromosome 8, clone RP11-43G18, comp... 40 9.0
69gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete se... 40 9.0
70gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complet... 40 9.0
71dbj|AK158292.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 9.0
72gb|AF004520.1|AF004520 Trichosurus vulpecula gonadotrophin alpha... 40 9.0
73gb|AC157279.2| Mus musculus BAC clone RP23-149H21 from chromosom... 40 9.0
74dbj|AK038166.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 9.0
75gb|AC158324.1| Homo sapiens chromosome 15 clone WI2-647I1, compl... 40 9.0
76ref|NM_011350.2| Mus musculus sema domain, immunoglobulin domain... 40 9.0
77gb|BC094567.1| Mus musculus sema domain, immunoglobulin domain (... 40 9.0
78emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor clu... 40 9.0
79emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Co... 40 9.0
80gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete... 40 9.0
81gb|AF038652.1| Mus musculus semaphorin M mRNA, partial cds 40 9.0
82dbj|AB022316.2| Mus musculus gene for semaphorin W, complete cds 40 9.0
83gb|AC006994.4| Homo sapiens BAC clone RP11-396J8 from 2, complet... 40 9.0
84dbj|AB052558.1| Nicotiana tabacum NTGT1b mRNA for glucosyltransf... 40 9.0
85gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 9.0
86gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, comp... 40 9.0
87gb|AC090572.7| Homo sapiens chromosome 8, clone RP11-386D6, comp... 40 9.0
88gb|BC090625.1| Mus musculus sema domain, immunoglobulin domain (... 40 9.0
89gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 ma... 40 9.0
90dbj|AK057810.1| Homo sapiens cDNA FLJ25081 fis, clone CBL07659 40 9.0
91ref|XM_311661.2| Anopheles gambiae str. PEST ENSANGP00000015017 ... 40 9.0
92emb|BX000361.8| Zebrafish DNA sequence from clone DKEY-181F18 in... 40 9.0
93gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73... 40 9.0
94gb|AC112687.20| Mus musculus chromosome 9, clone RP23-230A14, co... 40 9.0
95gb|AF017447.1|AF017447 Trichosurus vulpecula common glycoprotein... 40 9.0
96gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete... 40 9.0
97gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromos... 40 9.0
98emb|CT033211.1| Platynereis dumerilii EST IB0AAA24DE05FM1 40 9.0
99gb|AC165159.2| Mus musculus BAC clone RP23-234N1 from chromosome... 40 9.0
100ref|NM_205264.1| Gallus gallus tumor protein p53 (TP53), mRNA 40 9.0
101gb|DQ138897.1| Drosophila simulans strain Ky-a CG18265 gene, par... 40 9.0
102emb|AL671229.11| Mouse DNA sequence from clone RP23-93N10 on chr... 40 9.0
103emb|AL589873.11| Mouse DNA sequence from clone RP23-120P1 on chr... 40 9.0
104dbj|AB021291.1| Mus musculus mRNA for semaphorin W, complete cds 40 9.0
105dbj|AB002563.1| Rattus norvegicus mRNA for semaphorin W, complet... 40 9.0
106emb|AL591892.4| Mouse DNA sequence from clone RP23-422F22 on chr... 40 9.0 
>dbj|AK060397.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-B05, full
           insert sequence
          Length = 1208

 Score =  389 bits (196), Expect = e-105
 Identities = 439/520 (84%)
 Strand = Plus / Minus

                                                                       
Query: 129 gtaatctgctctataaataaggcttcctgcttgctcgttaacccaagatcagtaaatgat 188
           |||||||  |||| ||||||||||||||||||||| ||||  || |||||| ||||||| 
Sbjct: 936 gtaatcttttctagaaataaggcttcctgcttgcttgttaggcccagatcactaaatgac 877

                                                                       
Query: 189 tggtcgccgtcagcagtggtaaaagcacgcctggggtaagtccttaccagtctgtaggtt 248
              ||||| ||| ||||||| ||||||||||| ||||| | |||||||||||||||||||
Sbjct: 876 atatcgccctcaccagtggtgaaagcacgccttgggtacgaccttaccagtctgtaggtt 817

                                                                       
Query: 249 tctggcctgcaggtcctgccaacgtctaagaaatcaaaaagggacttgaatttatcagat 308
            ||||| |  | |||||||||| ||||||||||||||||||| |||  | ||||| ||||
Sbjct: 816 cctggcttataagtcctgccaatgtctaagaaatcaaaaaggaactgaagtttatgagat 757

                                                                       
Query: 309 tttaaaaagcgacgcccctgtcgattaccgtcaggcatgcgaactacgagtgttataact 368
           || | ||||||||||||||||||| |||| ||||||||||| ||||| ||||| | | | 
Sbjct: 756 ttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaagtgtgacagca 697

                                                                       
Query: 369 ccttccttgtctgaaggtggctccattggcaatgatgcttctttggcagcaagactggcc 428
           ||||||| ||||| || ||||||    ||||||||||||| |||||  |||||||||| |
Sbjct: 696 ccttcctcgtctgcagctggctctgacggcaatgatgcttgtttggatgcaagactggac 637

                                                                       
Query: 429 tcaagctcctctttctcaagttcctttttacgccgttcctcctcctcttgcttttgcttc 488
           || |||||||||| ||| ||||  |||||||||| |||||| ||||||||||| || || 
Sbjct: 636 tctagctcctcttcctccagttgttttttacgcctttcctcttcctcttgcttctgtttt 577

                                                                       
Query: 489 tcaagagcagcttcttttgcagcagtttcttccagcagtcggagctcagcttcttgtaga 548
           ||||| ||||||||| |||||||||||||||||||  | || ||||| || || ||||| 
Sbjct: 576 tcaagggcagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagg 517

                                                                       
Query: 549 gtcttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgc 608
           | |||||  || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 516 gccttcaactctttttcttgatcagcttggagtgatgcaaggtattcatcatcctgctgc 457

                                                   
Query: 609 tctcgtaataaccgttgttcagtcaattctggtggtggag 648
           || ||||| ||||| |||||||| ||| |||||| |||||
Sbjct: 456 tcacgtaacaaccgctgttcagttaatgctggtgatggag 417
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>dbj|AK103370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P18, full
            insert sequence
          Length = 2065

 Score =  327 bits (165), Expect = 3e-86
 Identities = 354/417 (84%)
 Strand = Plus / Minus

                                                                        
Query: 232  ttaccagtctgtaggtttctggcctgcaggtcctgccaacgtctaagaaatcaaaaaggg 291
            ||||||||||||||||| ||||| |  | |||||||||| ||||||||||||||||||| 
Sbjct: 1677 ttaccagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaaaagga 1618

                                                                        
Query: 292  acttgaatttatcagattttaaaaagcgacgcccctgtcgattaccgtcaggcatgcgaa 351
            |||  | ||||| |||||| | ||||||||||||||||||| |||| ||||||||||| |
Sbjct: 1617 actgaagtttatgagatttcagaaagcgacgcccctgtcgactaccatcaggcatgcgga 1558

                                                                        
Query: 352  ctacgagtgttataactccttccttgtctgaaggtggctccattggcaatgatgcttctt 411
            |||| ||||| | | | ||||||| ||||| || ||||||    ||||||||||||| ||
Sbjct: 1557 ctacaagtgtgacagcaccttcctcgtctgcagctggctctgacggcaatgatgcttgtt 1498

                                                                        
Query: 412  tggcagcaagactggcctcaagctcctctttctcaagttcctttttacgccgttcctcct 471
            |||  |||||||||| ||| |||||||||| ||| ||||  |||||||||| |||||| |
Sbjct: 1497 tggatgcaagactggactctagctcctcttcctccagttgttttttacgcctttcctctt 1438

                                                                        
Query: 472  cctcttgcttttgcttctcaagagcagcttcttttgcagcagtttcttccagcagtcgga 531
            |||||||||| || || ||||| ||||||||| |||||||||||||||||||  | || |
Sbjct: 1437 cctcttgcttctgtttttcaagggcagcttctcttgcagcagtttcttccaggcgacgaa 1378

                                                                        
Query: 532  gctcagcttcttgtagagtcttcatttccttttcttgatcagcttggagtgatgcaaggt 591
            |||| || || ||||| | |||||  || |||||||||||||||||||||||||||||||
Sbjct: 1377 gctcggcctcctgtagggccttcaactctttttcttgatcagcttggagtgatgcaaggt 1318

                                                                     
Query: 592  actcatcatcctgctgctctcgtaataaccgttgttcagtcaattctggtggtggag 648
            | ||||||||||||||||| ||||| ||||| |||||||| ||| |||||| |||||
Sbjct: 1317 attcatcatcctgctgctcacgtaacaaccgctgttcagttaatgctggtgatggag 1261



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtaatctgctctataaataaggcttcctgcttgctcgttaacccaagatcagtaaatgat 188
            |||||||  |||| ||||||||||||||||||||| ||||  || |||||| ||||||| 
Sbjct: 1793 gtaatcttttctagaaataaggcttcctgcttgcttgttaggcccagatcactaaatgac 1734

                                                           
Query: 189  tggtcgccgtcagcagtggtaaaagcacgcctggggtaagtccttac 235
               ||||| ||| ||||||| ||||||||||| ||||| | ||||||
Sbjct: 1733 atatcgccctcaccagtggtgaaagcacgccttgggtacgaccttac 1687
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  145 bits (73), Expect = 2e-31
 Identities = 145/169 (85%)
 Strand = Plus / Plus

                                                                            
Query: 436      cctctttctcaagttcctttttacgccgttcctcctcctcttgcttttgcttctcaagag 495
                |||||| ||| ||||  |||||||||| |||||| ||||||||||| || || ||||| |
Sbjct: 20235580 cctcttcctccagttgttttttacgcctttcctcttcctcttgcttctgtttttcaaggg 20235639

                                                                            
Query: 496      cagcttcttttgcagcagtttcttccagcagtcggagctcagcttcttgtagagtcttca 555
                |||||||| |||||||||||||||||||  | || ||||| || || ||||| | |||||
Sbjct: 20235640 cagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagggccttca 20235699

                                                                 
Query: 556      tttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctg 604
                  || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 20235700 actctttttcttgatcagcttggagtgatgcaaggtattcatcatcctg 20235748



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                            
Query: 299      tttatcagattttaaaaagcgacgcccctgtcgattaccgtcaggcatgcgaactacgag 358
                ||||| |||||| | ||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 20234974 tttatgagatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaag 20235033

                                                                            
Query: 359      tgttataactccttccttgtctgaaggtggctccattggcaatgatgcttctttggcagc 418
                ||| | | | ||||||| ||||| || ||||||    ||||||||||||| |||||  ||
Sbjct: 20235034 tgtgacagcaccttcctcgtctgcagctggctctgacggcaatgatgcttgtttggatgc 20235093

                                    
Query: 419      aagactggcctcaagctcct 438
                |||||||| ||| |||||||
Sbjct: 20235094 aagactggactctagctcct 20235113



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                            
Query: 129      gtaatctgctctataaataaggcttcctgcttgctcgttaacccaagatcagtaaatgat 188
                |||||||  |||| ||||||||||||||||||||| ||||  || |||||| ||||||| 
Sbjct: 20234238 gtaatcttttctagaaataaggcttcctgcttgcttgttaggcccagatcactaaatgac 20234297

                                                                
Query: 189      tggtcgccgtcagcagtggtaaaagcacgcctggggtaagtccttacc 236
                   ||||| ||| ||||||| ||||||||||| ||||| | |||||||
Sbjct: 20234298 atatcgccctcaccagtggtgaaagcacgccttgggtacgaccttacc 20234345



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 232      ttaccagtctgtaggtttctggcctgcaggtcctgccaacgtctaagaaatcaaaaagg 290
                ||||||||||||||||| ||||| |  | |||||||||| |||||||||||||||||||
Sbjct: 20234842 ttaccagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaaaagg 20234900
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score =  145 bits (73), Expect = 2e-31
 Identities = 145/169 (85%)
 Strand = Plus / Plus

                                                                         
Query: 436   cctctttctcaagttcctttttacgccgttcctcctcctcttgcttttgcttctcaagag 495
             |||||| ||| ||||  |||||||||| |||||| ||||||||||| || || ||||| |
Sbjct: 14707 cctcttcctccagttgttttttacgcctttcctcttcctcttgcttctgtttttcaaggg 14766

                                                                         
Query: 496   cagcttcttttgcagcagtttcttccagcagtcggagctcagcttcttgtagagtcttca 555
             |||||||| |||||||||||||||||||  | || ||||| || || ||||| | |||||
Sbjct: 14767 cagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagggccttca 14826

                                                              
Query: 556   tttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctg 604
               || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14827 actctttttcttgatcagcttggagtgatgcaaggtattcatcatcctg 14875



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                         
Query: 299   tttatcagattttaaaaagcgacgcccctgtcgattaccgtcaggcatgcgaactacgag 358
             ||||| |||||| | ||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 14101 tttatgagatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaag 14160

                                                                         
Query: 359   tgttataactccttccttgtctgaaggtggctccattggcaatgatgcttctttggcagc 418
             ||| | | | ||||||| ||||| || ||||||    ||||||||||||| |||||  ||
Sbjct: 14161 tgtgacagcaccttcctcgtctgcagctggctctgacggcaatgatgcttgtttggatgc 14220

                                 
Query: 419   aagactggcctcaagctcct 438
             |||||||| ||| |||||||
Sbjct: 14221 aagactggactctagctcct 14240



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                         
Query: 129   gtaatctgctctataaataaggcttcctgcttgctcgttaacccaagatcagtaaatgat 188
             |||||||  |||| ||||||||||||||||||||| ||||  || |||||| ||||||| 
Sbjct: 13365 gtaatcttttctagaaataaggcttcctgcttgcttgttaggcccagatcactaaatgac 13424

                                                             
Query: 189   tggtcgccgtcagcagtggtaaaagcacgcctggggtaagtccttacc 236
                ||||| ||| ||||||| ||||||||||| ||||| | |||||||
Sbjct: 13425 atatcgccctcaccagtggtgaaagcacgccttgggtacgaccttacc 13472



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 232   ttaccagtctgtaggtttctggcctgcaggtcctgccaacgtctaagaaatcaaaaagg 290
             ||||||||||||||||| ||||| |  | |||||||||| |||||||||||||||||||
Sbjct: 13969 ttaccagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaaaagg 14027
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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0047P18
          Length = 169128

 Score =  145 bits (73), Expect = 2e-31
 Identities = 145/169 (85%)
 Strand = Plus / Plus

                                                                          
Query: 436    cctctttctcaagttcctttttacgccgttcctcctcctcttgcttttgcttctcaagag 495
              |||||| ||| ||||  |||||||||| |||||| ||||||||||| || || ||||| |
Sbjct: 129080 cctcttcctccagttgttttttacgcctttcctcttcctcttgcttctgtttttcaaggg 129139

                                                                          
Query: 496    cagcttcttttgcagcagtttcttccagcagtcggagctcagcttcttgtagagtcttca 555
              |||||||| |||||||||||||||||||  | || ||||| || || ||||| | |||||
Sbjct: 129140 cagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagggccttca 129199

                                                               
Query: 556    tttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctg 604
                || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 129200 actctttttcttgatcagcttggagtgatgcaaggtattcatcatcctg 129248



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                          
Query: 299    tttatcagattttaaaaagcgacgcccctgtcgattaccgtcaggcatgcgaactacgag 358
              ||||| |||||| | ||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 128474 tttatgagatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaag 128533

                                                                          
Query: 359    tgttataactccttccttgtctgaaggtggctccattggcaatgatgcttctttggcagc 418
              ||| | | | ||||||| ||||| || ||||||    ||||||||||||| |||||  ||
Sbjct: 128534 tgtgacagcaccttcctcgtctgcagctggctctgacggcaatgatgcttgtttggatgc 128593

                                  
Query: 419    aagactggcctcaagctcct 438
              |||||||| ||| |||||||
Sbjct: 128594 aagactggactctagctcct 128613



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                          
Query: 129    gtaatctgctctataaataaggcttcctgcttgctcgttaacccaagatcagtaaatgat 188
              |||||||  |||| ||||||||||||||||||||| ||||  || |||||| ||||||| 
Sbjct: 127738 gtaatcttttctagaaataaggcttcctgcttgcttgttaggcccagatcactaaatgac 127797

                                                              
Query: 189    tggtcgccgtcagcagtggtaaaagcacgcctggggtaagtccttacc 236
                 ||||| ||| ||||||| ||||||||||| ||||| | |||||||
Sbjct: 127798 atatcgccctcaccagtggtgaaagcacgccttgggtacgaccttacc 127845



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                         
Query: 232    ttaccagtctgtaggtttctggcctgcaggtcctgccaacgtctaagaaatcaaaaagg 290
              ||||||||||||||||| ||||| |  | |||||||||| |||||||||||||||||||
Sbjct: 128342 ttaccagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaaaagg 128400
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>gb|AY105821.1| Zea mays PCO142874 mRNA sequence
          Length = 1396

 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                        
Query: 559  ccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgctctcgtaata 618
            ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 1381 ccttttcttgatcagcttgtagcgatgcaaggtactcatcgtcctgctgctctcgtaata 1322

                                           
Query: 619  accgttgttcagtcaattctggtggtggaga 649
            |||| |||||||| ||| |||||| ||||||
Sbjct: 1321 accgctgttcagttaatgctggtgatggaga 1291
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>dbj|AK063524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-A03, full
            insert sequence
          Length = 1297

 Score =  105 bits (53), Expect = 2e-19
 Identities = 74/81 (91%)
 Strand = Plus / Minus

                                                                        
Query: 568  gatcagcttggagtgatgcaaggtactcatcatcctgctgctctcgtaataaccgttgtt 627
            ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 1297 gatcagcttggagtgatgcaaggtattcatcatcctgctgctcacgtaacaaccgctgtt 1238

                                 
Query: 628  cagtcaattctggtggtggag 648
            |||| ||| |||||| |||||
Sbjct: 1237 cagttaatgctggtgatggag 1217
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>gb|AY111183.1| Zea mays CL21530_1 mRNA sequence
          Length = 771

 Score =  105 bits (53), Expect = 2e-19
 Identities = 184/225 (81%), Gaps = 2/225 (0%)
 Strand = Plus / Plus

                                                                       
Query: 132 atctgctctataaataaggcttcctgcttgctcgttaacccaagatcagtaaatgattgg 191
           |||||||||| ||| | ||||||||||||||| ||||  ||||||||| | ||||||  |
Sbjct: 269 atctgctctagaaacagggcttcctgcttgcttgttaggccaagatcactgaatgatacg 328

                                                                       
Query: 192 tcgccgtcagcag-tggtaaaagcacgcctggggtaagtccttaccagtctgtaggtttc 250
           || || || || | ||||||| |  ||||| ||||| ||||| |||| |||||||||  |
Sbjct: 329 tcaccctc-gctgctggtaaacgtgcgccttgggtatgtcctcaccaatctgtaggtccc 387

                                                                       
Query: 251 tggcctgcaggtcctgccaacgtctaagaaatcaaaaagggacttgaatttatcagattt 310
           |||| |||| ||||| |||| ||||||||||||||| ||| |||  | |||||||| |||
Sbjct: 388 tggcttgcaagtcctcccaatgtctaagaaatcaaataggaactgaagtttatcagtttt 447

                                                        
Query: 311 taaaaagcgacgcccctgtcgattaccgtcaggcatgcgaactac 355
            | |||||| |||||||||||| |||| |||||||| || |||||
Sbjct: 448 gagaaagcggcgcccctgtcgactaccatcaggcattcggactac 492



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 565 cttgatcagcttggagtgatgcaaggtactcatcatcctgctgctctcgtaataaccgtt 624
           ||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||| |
Sbjct: 702 cttgatcagcttgtagtgacgcaaggtactcatcgtcctgctgctctcttaataaccgct 761

                
Query: 625 gttca 629
           |||||
Sbjct: 762 gttca 766
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>ref|XM_483631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Minus

                                                                        
Query: 386  tggctccattggcaatgatgcttctttggcagcaagactggcctcaagctcctctttctc 445
            ||||||| ||||||||||||||| |||||| |||||  ||| ||| |  ||||||| |||
Sbjct: 1611 tggctcctttggcaatgatgcttgtttggctgcaagcttggactccaattcctcttcctc 1552

                                                                        
Query: 446  aagttcctttttacgccgttcctcctcctcttgcttttgcttctcaagagcagcttcttt 505
             ||||  ||| | |||  ||| ||||||||||| ||||||||  ||| |||||||||| |
Sbjct: 1551 gagttgttttcttcgcttttcttcctcctcttgtttttgctttgcaatagcagcttctct 1492

                    
Query: 506  tgcagcag 513
            | ||||||
Sbjct: 1491 ttcagcag 1484



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 551  cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgctc 610
            ||||| ||| |||||| | ||||||| ||| ||||| || |||||||| |||||||||||
Sbjct: 1446 cttcaattctttttctcggtcagcttcgagagatgctagatactcatcgtcctgctgctc 1387

                                 
Query: 611  tcgtaataaccgttgttcagt 631
             | ||| ||||||||| ||||
Sbjct: 1386 ccttaacaaccgttgtgcagt 1366



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 131  aatctgctctataaataaggcttcctgcttgct 163
            ||||||||||| ||| |||||||||||||||||
Sbjct: 1866 aatctgctctagaaacaaggcttcctgcttgct 1834
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>dbj|AK070009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E15, full
            insert sequence
          Length = 2141

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Minus

                                                                        
Query: 386  tggctccattggcaatgatgcttctttggcagcaagactggcctcaagctcctctttctc 445
            ||||||| ||||||||||||||| |||||| |||||  ||| ||| |  ||||||| |||
Sbjct: 1611 tggctcctttggcaatgatgcttgtttggctgcaagcttggactccaattcctcttcctc 1552

                                                                        
Query: 446  aagttcctttttacgccgttcctcctcctcttgcttttgcttctcaagagcagcttcttt 505
             ||||  ||| | |||  ||| ||||||||||| ||||||||  ||| |||||||||| |
Sbjct: 1551 gagttgttttcttcgcttttcttcctcctcttgtttttgctttgcaatagcagcttctct 1492

                    
Query: 506  tgcagcag 513
            | ||||||
Sbjct: 1491 ttcagcag 1484



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 551  cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgctc 610
            ||||| ||| |||||| | ||||||| ||| ||||| || |||||||| |||||||||||
Sbjct: 1446 cttcaattctttttctcggtcagcttcgagagatgctagatactcatcgtcctgctgctc 1387

                                 
Query: 611  tcgtaataaccgttgttcagt 631
             | ||| ||||||||| ||||
Sbjct: 1386 ccttaacaaccgttgtgcagt 1366



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 131  aatctgctctataaataaggcttcctgcttgct 163
            ||||||||||| ||| |||||||||||||||||
Sbjct: 1866 aatctgctctagaaacaaggcttcctgcttgct 1834
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>gb|BT016877.1| Zea mays clone Contig710 mRNA sequence
          Length = 1037

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 561 ttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgctc 610
           |||||| ||||||||||||| |  ||||| ||||||||||||||||||||
Sbjct: 849 ttttctcgatcagcttggagagcagcaagatactcatcatcctgctgctc 898
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>gb|AY105878.1| Zea mays PCO080240 mRNA sequence
          Length = 794

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 561 ttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgctc 610
           |||||| ||||||||||||| |  ||||| ||||||||||||||||||||
Sbjct: 148 ttttctcgatcagcttggagagcagcaagatactcatcatcctgctgctc 99
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>dbj|AK103732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138F05, full
            insert sequence
          Length = 2568

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 551  cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctgctc 610
            ||||| ||| |||||| | ||||||| ||| ||||| || |||||||| |||||||||||
Sbjct: 1454 cttcaattctttttctcggtcagcttcgagagatgctagatactcatcgtcctgctgctc 1395

                                 
Query: 611  tcgtaataaccgttgttcagt 631
             | ||| ||||||||| ||||
Sbjct: 1394 ccttaacaaccgttgtgcagt 1374



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 468  tcctcctcttgcttttgcttctcaagagcagcttcttttgcagcag 513
            ||||||||||| ||||||||  ||| |||||||||| || ||||||
Sbjct: 1537 tcctcctcttgtttttgctttgcaatagcagcttctctttcagcag 1492
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 131      aatctgctctataaataaggcttcctgcttgct 163
                ||||||||||| ||| |||||||||||||||||
Sbjct: 27358171 aatctgctctagaaacaaggcttcctgcttgct 27358203



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 386      tggctccattggcaatgatgcttctttggcagcaag 421
                ||||||| ||||||||||||||| |||||| |||||
Sbjct: 27359195 tggctcctttggcaatgatgcttgtttggctgcaag 27359230



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 468      tcctcctcttgcttttgcttctcaagagcagcttcttttgcagcag 513
                ||||||||||| ||||||||  ||| |||||||||| || ||||||
Sbjct: 27359801 tcctcctcttgtttttgctttgcaatagcagcttctctttcagcag 27359846
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 131   aatctgctctataaataaggcttcctgcttgct 163
             ||||||||||| ||| |||||||||||||||||
Sbjct: 59698 aatctgctctagaaacaaggcttcctgcttgct 59730



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 386   tggctccattggcaatgatgcttctttggcagcaag 421
             ||||||| ||||||||||||||| |||||| |||||
Sbjct: 60722 tggctcctttggcaatgatgcttgtttggctgcaag 60757



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 468   tcctcctcttgcttttgcttctcaagagcagcttcttttgcagcag 513
             ||||||||||| ||||||||  ||| |||||||||| || ||||||
Sbjct: 61328 tcctcctcttgtttttgctttgcaatagcagcttctctttcagcag 61373
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>ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 mRNA, complete cds
          Length = 1819

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 582  gatgcaaggtactcatcatcctgctgctctcg 613
            |||||||| ||||||||||||||||| |||||
Sbjct: 1265 gatgcaagatactcatcatcctgctgttctcg 1234
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>gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1609

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 582  gatgcaaggtactcatcatcctgctgctctcg 613
            |||||||| ||||||||||||||||| |||||
Sbjct: 1145 gatgcaagatactcatcatcctgctgttctcg 1114
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>gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1832

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 582  gatgcaaggtactcatcatcctgctgctctcg 613
            |||||||| ||||||||||||||||| |||||
Sbjct: 1262 gatgcaagatactcatcatcctgctgttctcg 1231
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>emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH80ZE07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1783

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 582  gatgcaaggtactcatcatcctgctgctctcg 613
            |||||||| ||||||||||||||||| |||||
Sbjct: 1265 gatgcaagatactcatcatcctgctgttctcg 1234
to top
>emb|AJ234533.1|HVU234533 Hordeum vulgare genomic DNA fragment; clone MWG0604
          Length = 1028

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 232  ttaccagtctgtaggtttctggc 254
            |||||||||||||||||||||||
Sbjct: 1006 ttaccagtctgtaggtttctggc 1028
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>ref|NM_187863.1| Oryza sativa (japonica cultivar-group), Ozsa8307 predicted mRNA
          Length = 1659

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 466 cctcctcctcttgcttttgctt 487
           ||||||||||||||||||||||
Sbjct: 446 cctcctcctcttgcttttgctt 467
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>gb|AC005249.2| Homo sapiens BAC clone GS1-115J1 from 7, complete sequence
          Length = 162531

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 296   gaatttatcagattttaaaaag 317
             ||||||||||||||||||||||
Sbjct: 69103 gaatttatcagattttaaaaag 69124
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>gb|AC145519.1| Pan troglodytes BAC clone RP43-32M13 from 7, complete sequence
          Length = 155340

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 296  gaatttatcagattttaaaaag 317
            ||||||||||||||||||||||
Sbjct: 8524 gaatttatcagattttaaaaag 8545
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>emb|BX248332.14| Zebrafish DNA sequence from clone CH211-212O2 in linkage group 9,
              complete sequence
          Length = 237498

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 465    tcctcctcctcttgcttttgcttctc 490
              |||||||||| |||||||||||||||
Sbjct: 100190 tcctcctcctgttgcttttgcttctc 100165
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 466     cctcctcctcttgcttttgctt 487
               ||||||||||||||||||||||
Sbjct: 8328804 cctcctcctcttgcttttgctt 8328783
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>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0434D08
          Length = 161266

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 466    cctcctcctcttgcttttgctt 487
              ||||||||||||||||||||||
Sbjct: 122735 cctcctcctcttgcttttgctt 122714
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>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome
          Length = 791654

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 291    gacttgaatttatcagatttta 312
              ||||||||||||||||||||||
Sbjct: 580143 gacttgaatttatcagatttta 580164
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>ref|NM_117243.3| Arabidopsis thaliana SAY1 AT4G11740 (SAY1) mRNA, complete cds
          Length = 2035

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 551  cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctg 607
            ||||||||| || ||| | |||||||| || || ||||  |||||||||||||||||
Sbjct: 1367 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgctg 1311
to top
>emb|BX936280.10| Platypus DNA sequence from clone XX-452D13, complete sequence
          Length = 122600

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   ggcctgtctgaatcctttccc 121
             |||||||||||||||||||||
Sbjct: 26855 ggcctgtctgaatcctttccc 26875
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>gb|AC104471.6| Homo sapiens 3 BAC RP11-80B17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160698

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 496   cagcttcttttgcagcagtttcttc 520
             ||||||||||| |||||||||||||
Sbjct: 88317 cagcttcttttccagcagtttcttc 88293
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 457     tacgccgttcctcctcctctt 477
               |||||||||||||||||||||
Sbjct: 2999576 tacgccgttcctcctcctctt 2999556
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>gb|AY064650.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 551 cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctg 607
           ||||||||| || ||| | |||||||| || || ||||  |||||||||||||||||
Sbjct: 750 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgctg 694
to top
>gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, complete sequence
          Length = 176117

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    tggcctgcaggtcctgccaac 271
              |||||||||||||||||||||
Sbjct: 112248 tggcctgcaggtcctgccaac 112228
to top
>gb|AY042788.1| Arabidopsis thaliana Unknown protein (T5C23.170) mRNA, complete cds
          Length = 1483

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 551 cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctg 607
           ||||||||| || ||| | |||||||| || || ||||  |||||||||||||||||
Sbjct: 902 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgctg 846
to top
>emb|BX827865.1|CNS0A2Z0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH29ZA04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1915

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 551  cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctg 607
            ||||||||| || ||| | |||||||| || || ||||  |||||||||||||||||
Sbjct: 1372 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgctg 1316
to top
>gb|AC007336.6| Homo sapiens chromosome 16 clone RP11-212I21, complete sequence
          Length = 193963

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   tggcctgcaggtcctgccaac 271
             |||||||||||||||||||||
Sbjct: 39656 tggcctgcaggtcctgccaac 39676
to top
>dbj|AB007767.1| Arabidopsis thaliana SAY1 mRNA for Ara4-interacting protein, complete
            cds
          Length = 2030

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 551  cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgctg 607
            ||||||||| || ||| | |||||||| || || ||||  |||||||||||||||||
Sbjct: 1385 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgctg 1329
to top
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 426     gcctcaagctcctctttctc 445
               ||||||||||||||||||||
Sbjct: 1581626 gcctcaagctcctctttctc 1581607
to top
>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence
          Length = 212628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   cttgcttttgcttctcaaga 494
             ||||||||||||||||||||
Sbjct: 95679 cttgcttttgcttctcaaga 95660
to top
>ref|XM_610832.2| PREDICTED: Bos taurus hypothetical LOC532320 (LOC532320), mRNA
          Length = 755

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 464 ttcctcctcctcttgctttt 483
           ||||||||||||||||||||
Sbjct: 336 ttcctcctcctcttgctttt 317
to top
>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence
          Length = 196560

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 467  ctcctcctcttgcttttgct 486
            ||||||||||||||||||||
Sbjct: 4330 ctcctcctcttgcttttgct 4349
to top
>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence
          Length = 159722

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   ctcctcctcttgcttttgct 486
             ||||||||||||||||||||
Sbjct: 29689 ctcctcctcttgcttttgct 29670
to top
>gb|AC147095.2| Pan troglodytes BAC clone RP43-51E22 from 7, complete sequence
          Length = 152510

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   ttcttgtagagtcttcattt 558
             ||||||||||||||||||||
Sbjct: 51279 ttcttgtagagtcttcattt 51260
to top
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217046

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   tgattggtcgccgtcagcag 204
             ||||||||||||||||||||
Sbjct: 97809 tgattggtcgccgtcagcag 97790
to top
>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete
             sequence
          Length = 200910

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   ctctataaataaggcttcctgctt 160
             ||||||||||||||| ||||||||
Sbjct: 75475 ctctataaataaggcctcctgctt 75498
to top
>gb|AC073109.2| Homo sapiens BAC clone RP11-502P9 from 7, complete sequence
          Length = 158340

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 539    ttcttgtagagtcttcattt 558
              ||||||||||||||||||||
Sbjct: 137963 ttcttgtagagtcttcattt 137944
to top
>gb|BC057048.1| Mus musculus sema domain, immunoglobulin domain (Ig), TM domain, and
            short cytoplasmic domain, mRNA (cDNA clone
            IMAGE:6832579), partial cds
          Length = 3943

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2043 tgattggtcgccgtcagcag 2062
to top
>ref|NM_019272.1| Rattus norvegicus sema domain, immunoglobulin domain (Ig),
            transmembrane domain (TM) and short cytoplasmic domain,
            (semaphorin) 4F (Sema4f), mRNA
          Length = 4008

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2129 tgattggtcgccgtcagcag 2148
to top
>gb|AC126793.13| Medicago truncatula clone mth2-17m16, complete sequence
          Length = 109787

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   gcttctcaagagcagcttct 503
             ||||||||||||||||||||
Sbjct: 48498 gcttctcaagagcagcttct 48479
to top
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 494     agcagcttcttttgcagcag 513
               ||||||||||||||||||||
Sbjct: 2173911 agcagcttcttttgcagcag 2173892
to top
>emb|AL358815.12| Human DNA sequence from clone RP11-526J3 on chromosome 9, complete
             sequence
          Length = 192867

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acatgtaaaaccccaactct 79
             ||||||||||||||||||||
Sbjct: 91742 acatgtaaaaccccaactct 91723
to top
>emb|AL137008.9| Human DNA sequence from clone RP3-361I14 on chromosome 6 Contains a
             KIAA1470 pseudogene and the 3' end of the BPAG1 gene for
             bullous pemphigoid antigen 1 (230/240kD), complete
             sequence
          Length = 67033

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aaaaagggacttgaatttat 303
             ||||||||||||||||||||
Sbjct: 39777 aaaaagggacttgaatttat 39796
to top
>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer Institute
              Drosophila BAC library) complete sequence
          Length = 199396

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ccgttcctcctcctcttgct 480
              ||||||||||||||||||||
Sbjct: 181440 ccgttcctcctcctcttgct 181459
to top
>emb|AL021394.10|HS237J2 Human DNA sequence from clone RP1-237J2 on chromosome 20q12-13.13
             Contains part of the NCOA3 gene for nuclear receptor
             coactivator 3 and a CpG island, complete sequence
          Length = 68589

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tctaagaaatcaaaaaggga 292
             ||||||||||||||||||||
Sbjct: 47920 tctaagaaatcaaaaaggga 47939
to top
>emb|X13057.1|GGP53 Chicken mRNA for nuclear oncoprotein p53
          Length = 1555

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 503  ttttgcagcagtttcttccagcag 526
            ||||||||||||||||||| ||||
Sbjct: 1154 ttttgcagcagtttcttcccgcag 1131
to top
>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 582    gatgcaaggtactcatcatcctgc 605
              |||||||| |||||||||||||||
Sbjct: 118588 gatgcaagatactcatcatcctgc 118611
to top
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32
          Length = 198788

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                      
Query: 551    cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgct 606
              ||||||||| || ||| | |||||||| || || ||||  ||||||||||||||||
Sbjct: 125152 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgct 125097
to top
>emb|AL049500.1|ATT5C23 Arabidopsis thaliana DNA chromosome 4, BAC clone T5C23 (ESSA project)
          Length = 87104

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 551   cttcatttccttttcttgatcagcttggagtgatgcaaggtactcatcatcctgct 606
             ||||||||| || ||| | |||||||| || || ||||  ||||||||||||||||
Sbjct: 67988 cttcatttctttatctcggtcagcttgcagggacgcaacatactcatcatcctgct 67933
to top
>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 582   gatgcaaggtactcatcatcctgc 605
             |||||||| |||||||||||||||
Sbjct: 89501 gatgcaagatactcatcatcctgc 89524
to top
>emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 in linkage group 8,
             complete sequence
          Length = 91038

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   tgatgcttctttggcagcaa 420
             ||||||||||||||||||||
Sbjct: 78199 tgatgcttctttggcagcaa 78180
to top
>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184424

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    ccgttcctcctcctcttgct 480
              ||||||||||||||||||||
Sbjct: 150689 ccgttcctcctcctcttgct 150670
to top
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence
          Length = 111951

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    gcttctcaagagcagcttct 503
              ||||||||||||||||||||
Sbjct: 104358 gcttctcaagagcagcttct 104339
to top
>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence
          Length = 184338

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 593   ctcatcatcctgctgctctc 612
             ||||||||||||||||||||
Sbjct: 24094 ctcatcatcctgctgctctc 24113
to top
>dbj|AB236777.1| Trifolium pratense RNA for putative HEAT SHOCK PROTEIN 81-2, partial
            cds, clone: C1601
          Length = 1498

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    tttgacctcttcgacacaaa 20
            ||||||||||||||||||||
Sbjct: 1022 tttgacctcttcgacacaaa 1041
to top
>gb|AC108720.3| Homo sapiens 12 BAC RP11-251C23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 86966

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gaatttatcagattttaaaa 315
             ||||||||||||||||||||
Sbjct: 15544 gaatttatcagattttaaaa 15525
to top
>gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, complete sequence
          Length = 227632

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 464    ttcctcctcctcttgctttt 483
              ||||||||||||||||||||
Sbjct: 179521 ttcctcctcctcttgctttt 179540
to top
>dbj|AK143196.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130305L08 product:sema domain,
            immunoglobulin domain (Ig), TM domain, and short
            cytoplasmic domain, full insert sequence
          Length = 4059

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2179 tgattggtcgccgtcagcag 2198
to top
>gb|AC079071.9| Homo sapiens chromosome 8, clone RP11-43G18, complete sequence
          Length = 157811

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 486    ttctcaagagcagcttcttt 505
              ||||||||||||||||||||
Sbjct: 125373 ttctcaagagcagcttcttt 125354
to top
>gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete sequence
          Length = 162691

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    tgattggtcgccgtcagcag 204
              ||||||||||||||||||||
Sbjct: 133030 tgattggtcgccgtcagcag 133049
to top
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence
          Length = 182406

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    aagaaatcaaaaagggactt 295
              ||||||||||||||||||||
Sbjct: 101953 aagaaatcaaaaagggactt 101972
to top
>dbj|AK158292.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930101F23 product:sema domain,
            immunoglobulin domain (Ig), TM domain, and short
            cytoplasmic domain, full insert sequence
          Length = 3549

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2101 tgattggtcgccgtcagcag 2120
to top
>gb|AF004520.1|AF004520 Trichosurus vulpecula gonadotrophin alpha subunit mRNA, complete
           cds
          Length = 756

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 aaggtggctccattggcaat 401
           ||||||||||||||||||||
Sbjct: 702 aaggtggctccattggcaat 721
to top
>gb|AC157279.2| Mus musculus BAC clone RP23-149H21 from chromosome 13, complete
             sequence
          Length = 187493

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   ttcttgtagagtcttcattt 558
             ||||||||||||||||||||
Sbjct: 48851 ttcttgtagagtcttcattt 48870
to top
>dbj|AK038166.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130083J18
           product:unclassifiable, full insert sequence
          Length = 3131

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 gcctgtctgaatcctttccc 121
           ||||||||||||||||||||
Sbjct: 947 gcctgtctgaatcctttccc 966
to top
>gb|AC158324.1| Homo sapiens chromosome 15 clone WI2-647I1, complete sequence
          Length = 36905

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  ttcctcctcctcttgctttt 483
            ||||||||||||||||||||
Sbjct: 1611 ttcctcctcctcttgctttt 1630
to top
>ref|NM_011350.2| Mus musculus sema domain, immunoglobulin domain (Ig), TM domain, and
            short cytoplasmic domain (Sema4f), mRNA
          Length = 4002

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2135 tgattggtcgccgtcagcag 2154
to top
>gb|BC094567.1| Mus musculus sema domain, immunoglobulin domain (Ig), TM domain, and
            short cytoplasmic domain, mRNA (cDNA clone MGC:106526
            IMAGE:6834138), complete cds
          Length = 4062

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2162 tgattggtcgccgtcagcag 2181
to top
>emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor cluster
          Length = 210954

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 575    ttggagtgatgcaaggtact 594
              ||||||||||||||||||||
Sbjct: 207359 ttggagtgatgcaaggtact 207340
to top
>emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS64ZG05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1768

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 582  gatgcaaggtactcatcatcctgctgctctcg 613
            ||||| || ||||||||||||||||| |||||
Sbjct: 1237 gatgcgagatactcatcatcctgctgttctcg 1206
to top
>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence
          Length = 160741

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aagtatagacatgtaaaacc 71
              ||||||||||||||||||||
Sbjct: 110569 aagtatagacatgtaaaacc 110588
to top
>gb|AF038652.1| Mus musculus semaphorin M mRNA, partial cds
          Length = 2354

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 1894 tgattggtcgccgtcagcag 1913
to top
>dbj|AB022316.2| Mus musculus gene for semaphorin W, complete cds
          Length = 17211

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   tgattggtcgccgtcagcag 204
             ||||||||||||||||||||
Sbjct: 15219 tgattggtcgccgtcagcag 15238
to top
>gb|AC006994.4| Homo sapiens BAC clone RP11-396J8 from 2, complete sequence
          Length = 192104

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   aaagggacttgaatttatcagatt 309
             |||||||||||||||| |||||||
Sbjct: 25446 aaagggacttgaatttctcagatt 25423
to top
>dbj|AB052558.1| Nicotiana tabacum NTGT1b mRNA for glucosyltransferase, complete cds
          Length = 1692

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 549 gtcttcatttccttttcttg 568
           ||||||||||||||||||||
Sbjct: 57  gtcttcatttccttttcttg 38
to top
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete
              sequence
          Length = 253132

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 294    ttgaatttatcagattttaaaaag 317
              |||||||| |||||||||||||||
Sbjct: 185788 ttgaatttttcagattttaaaaag 185811
to top
>gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, complete sequence
          Length = 173270

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 638   tggtggtggagagtgcacta 657
             ||||||||||||||||||||
Sbjct: 21213 tggtggtggagagtgcacta 21232
to top
>gb|AC090572.7| Homo sapiens chromosome 8, clone RP11-386D6, complete sequence
          Length = 187022

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 638  tggtggtggagagtgcacta 657
            ||||||||||||||||||||
Sbjct: 4364 tggtggtggagagtgcacta 4345
to top
>gb|BC090625.1| Mus musculus sema domain, immunoglobulin domain (Ig), TM domain, and
            short cytoplasmic domain, mRNA (cDNA clone
            IMAGE:30354317), containing frame-shift errors
          Length = 4045

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2135 tgattggtcgccgtcagcag 2154
to top
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence
          Length = 214840

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    tgattggtcgccgtcagcag 204
              ||||||||||||||||||||
Sbjct: 179529 tgattggtcgccgtcagcag 179510
to top
>dbj|AK057810.1| Homo sapiens cDNA FLJ25081 fis, clone CBL07659
          Length = 1521

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 286 aaagggacttgaatttatcagatt 309
           |||||||||||||||| |||||||
Sbjct: 941 aaagggacttgaatttctcagatt 964
to top
>ref|XM_311661.2| Anopheles gambiae str. PEST ENSANGP00000015017
           (ENSANGG00000012528), partial mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 aggtggctccattggcaatg 402
           ||||||||||||||||||||
Sbjct: 492 aggtggctccattggcaatg 511
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>emb|BX000361.8| Zebrafish DNA sequence from clone DKEY-181F18 in linkage group 20,
             complete sequence
          Length = 124183

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tgaatttatcagattttaaa 314
             ||||||||||||||||||||
Sbjct: 28132 tgaatttatcagattttaaa 28113
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>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete
              sequence
          Length = 323816

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ccgttcctcctcctcttgct 480
              ||||||||||||||||||||
Sbjct: 321748 ccgttcctcctcctcttgct 321767
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>gb|AC112687.20| Mus musculus chromosome 9, clone RP23-230A14, complete sequence
          Length = 189775

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 531    agctcagcttcttgtagagt 550
              ||||||||||||||||||||
Sbjct: 100744 agctcagcttcttgtagagt 100763
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>gb|AF017447.1|AF017447 Trichosurus vulpecula common glycoprotein hormone alpha-subunit
           mRNA, complete cds
          Length = 730

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 aaggtggctccattggcaat 401
           ||||||||||||||||||||
Sbjct: 694 aaggtggctccattggcaat 713
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>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence
          Length = 197316

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    tgattggtcgccgtcagcag 204
              ||||||||||||||||||||
Sbjct: 182760 tgattggtcgccgtcagcag 182779
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>gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromosome unknown, complete
              sequence
          Length = 249034

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    ctcctcttgcttttgcttct 489
              ||||||||||||||||||||
Sbjct: 126567 ctcctcttgcttttgcttct 126586
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>emb|CT033211.1| Platynereis dumerilii EST IB0AAA24DE05FM1
          Length = 836

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 492 agagcagcttcttttgcagcagtt 515
           |||||||||| |||||||||||||
Sbjct: 516 agagcagctttttttgcagcagtt 539
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>gb|AC165159.2| Mus musculus BAC clone RP23-234N1 from chromosome 13, complete sequence
          Length = 215158

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   agtcttcatttccttttctt 567
             ||||||||||||||||||||
Sbjct: 98856 agtcttcatttccttttctt 98837
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>ref|NM_205264.1| Gallus gallus tumor protein p53 (TP53), mRNA
          Length = 1555

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 503  ttttgcagcagtttcttccagcag 526
            ||||||||||||||||||| ||||
Sbjct: 1154 ttttgcagcagtttcttcccgcag 1131
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>gb|DQ138897.1| Drosophila simulans strain Ky-a CG18265 gene, partial cds
          Length = 3924

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 ctcctcctcttgcttttgct 486
           ||||||||||||||||||||
Sbjct: 606 ctcctcctcttgcttttgct 587
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>emb|AL671229.11| Mouse DNA sequence from clone RP23-93N10 on chromosome 4, complete
             sequence
          Length = 237082

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aagtatagacatgtaaaacc 71
             ||||||||||||||||||||
Sbjct: 94647 aagtatagacatgtaaaacc 94628
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>emb|AL589873.11| Mouse DNA sequence from clone RP23-120P1 on chromosome 2, complete
              sequence
          Length = 170936

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    gcctgtctgaatcctttccc 121
              ||||||||||||||||||||
Sbjct: 112569 gcctgtctgaatcctttccc 112550
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>dbj|AB021291.1| Mus musculus mRNA for semaphorin W, complete cds
          Length = 4002

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2135 tgattggtcgccgtcagcag 2154
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>dbj|AB002563.1| Rattus norvegicus mRNA for semaphorin W, complete cds
          Length = 4008

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgattggtcgccgtcagcag 204
            ||||||||||||||||||||
Sbjct: 2129 tgattggtcgccgtcagcag 2148
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>emb|AL591892.4| Mouse DNA sequence from clone RP23-422F22 on chromosome 15, complete
             sequence
          Length = 113798

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 543   tgtagagtcttcatttccttttct 566
             |||||| |||||||||||||||||
Sbjct: 42835 tgtagaatcttcatttccttttct 42858


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,692,334
Number of Sequences: 3902068
Number of extensions: 7692334
Number of successful extensions: 172455
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 172020
Number of HSP's gapped (non-prelim): 423
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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