ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal22b20 |
|---|---|
| Clone Library Name | barley_pub |
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 Score = 201 bits (510), Expect = 1e-51 Identities = 98/98 (100%), Positives = 98/98 (100%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY Sbjct: 298 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 357 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA Sbjct: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 192 bits (489), Expect = 4e-49 Identities = 92/98 (93%), Positives = 97/98 (98%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR+LFPPFQK+IT+GYVSE+EAGKRLAQVVSEPSLTKSGVY Sbjct: 301 SLYPGCIATTGLFREHIPLFRILFPPFQKFITQGYVSEDEAGKRLAQVVSEPSLTKSGVY 360 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNKNSASFENQLS+EASD EKARKVWELSEKLVGLA Sbjct: 361 WSWNKNSASFENQLSQEASDAEKARKVWELSEKLVGLA 398
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 190 bits (483), Expect = 2e-48 Identities = 92/98 (93%), Positives = 95/98 (96%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVSEPSLTKSGVY Sbjct: 301 SLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEAESGKRLAQVVSEPSLTKSGVY 360 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNK+SASFENQLSEEASD EKARKVWE+SEKLVGLA Sbjct: 361 WSWNKDSASFENQLSEEASDVEKARKVWEVSEKLVGLA 398
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 399 Score = 187 bits (475), Expect = 2e-47 Identities = 90/98 (91%), Positives = 94/98 (95%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSEEE+GKRLAQVVS+PSLTKSGVY Sbjct: 302 SLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEEESGKRLAQVVSDPSLTKSGVY 361 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWN SASFENQLS+EASD EKARKVWE+SEKLVGLA Sbjct: 362 WSWNNASASFENQLSQEASDAEKARKVWEVSEKLVGLA 399
>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC| 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) Length = 401 Score = 187 bits (474), Expect = 2e-47 Identities = 89/98 (90%), Positives = 95/98 (96%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVS+PSL KSGVY Sbjct: 304 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLGKSGVY 363 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWN NS+SFENQLS+EASD EKA+K+WE+SEKLVGLA Sbjct: 364 WSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401
>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 405 Score = 187 bits (474), Expect = 2e-47 Identities = 89/98 (90%), Positives = 94/98 (95%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE EAGKRLAQVV++PSLTKSGVY Sbjct: 308 SLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSESEAGKRLAQVVADPSLTKSGVY 367 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNK SASFENQLS+EASD EKAR+VWE+SEKLVGLA Sbjct: 368 WSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 185 bits (470), Expect = 6e-47 Identities = 88/98 (89%), Positives = 95/98 (96%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV+EPSLTKSGVY Sbjct: 291 SLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVY 350 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNK+SASFENQLS+EASD EKARKVWELSEKLVGLA Sbjct: 351 WSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 185 bits (469), Expect = 8e-47 Identities = 88/98 (89%), Positives = 94/98 (95%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV EPSLTKSGVY Sbjct: 216 SLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSGVY 275 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNK+SASFENQLS+EASD EKARKVWELSEKLVGLA Sbjct: 276 WSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 313
>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 401 Score = 185 bits (469), Expect = 8e-47 Identities = 89/98 (90%), Positives = 93/98 (94%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIA+TGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVS+PSLTKSGVY Sbjct: 304 SLYPGCIASTGLFREHIPLFRALFPPFQKYITKGYVSETESGKRLAQVVSDPSLTKSGVY 363 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWN SASFENQLSEEASD EKARKVWE+SEKLVGLA Sbjct: 364 WSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 183 bits (464), Expect = 3e-46 Identities = 87/98 (88%), Positives = 94/98 (95%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV+EP LTKSGVY Sbjct: 291 SLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPVLTKSGVY 350 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSWNK+SASFENQLS+EASD EKARKVWELSEKLVGLA Sbjct: 351 WSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 458 Score = 169 bits (427), Expect = 6e-42 Identities = 78/97 (80%), Positives = 89/97 (91%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIA TGLFR H+ LFR LFPPFQKYITKGYVSEEEAGKR+AQVVS+P L+KSGVY Sbjct: 361 SLYPGCIAETGLFRNHVTLFRTLFPPFQKYITKGYVSEEEAGKRMAQVVSDPKLSKSGVY 420 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGL 248 WSWNK+S SFEN+LSEEAS+ EKA+++WELSE+L GL Sbjct: 421 WSWNKDSGSFENELSEEASNPEKAKRLWELSERLSGL 457
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 158 bits (399), Expect = 1e-38 Identities = 70/98 (71%), Positives = 84/98 (85%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGCIA TGLFREH+PLF+ LFPPFQKYITKGYVSEEEAG+RLA V+S+P L KSG Y Sbjct: 299 SLYPGCIAETGLFREHVPLFKTLFPPFQKYITKGYVSEEEAGRRLAAVISDPKLNKSGAY 358 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSW+ + SF+NQ+SEE +D KA K+W++S KLVGL+ Sbjct: 359 WSWSSTTGSFDNQVSEEVADDSKASKLWDISAKLVGLS 396
>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 119 bits (297), Expect = 7e-27 Identities = 58/101 (57%), Positives = 76/101 (75%), Gaps = 4/101 (3%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 SLYPGC+A T LFR H LFR +FP FQK +TKGYVS+E AG+R+A VV++ SGV+ Sbjct: 221 SLYPGCVADTPLFRNHYSLFRTIFPWFQKNVTKGYVSQELAGERVAMVVADDKFKDSGVH 280 Query: 358 WSW-NKNSA---SFENQLSEEASDTEKARKVWELSEKLVGL 248 WSW N+ A +F +LSE+ SD +KA+++W+LSEKLVGL Sbjct: 281 WSWGNRQQAGREAFVQELSEQGSDAQKAQRMWDLSEKLVGL 321
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 118 bits (295), Expect = 1e-26 Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 4/102 (3%) Frame = -3 Query: 538 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVY 359 +LYPGC+A T LFR +P+F+ +FP FQK IT GYVS+E AG+R AQVV++P +SGV+ Sbjct: 221 TLYPGCVADTPLFRNSLPVFQKVFPWFQKNITGGYVSQELAGERTAQVVADPEFKQSGVH 280 Query: 358 WSW----NKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 WSW + SF +LSE+ +D KA+++WELSEKLVGLA Sbjct: 281 WSWGNRQKEGRESFVQELSEKVTDDAKAKRMWELSEKLVGLA 322
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 37.4 bits (85), Expect = 0.027 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Frame = -3 Query: 535 LYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTK-SGVY 359 L+PG + T HIPL L+ P F + + E + + S P + SG Y Sbjct: 245 LHPGIVRTNLGRHIHIPL--LVKPLFNLVSWAFFKTPVEGAQTSIYLASSPEVEGVSGRY 302 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGL 248 + K E +L +A D ARK+W++SE +VGL Sbjct: 303 FGDCK-----EEELLPKAMDESVARKLWDISEVMVGL 334
>ALA8_ARATH (Q9LK90) Putative phospholipid-transporting ATPase 8 (EC 3.6.3.1)| (Aminophospholipid flippase 8) Length = 1189 Score = 35.4 bits (80), Expect = 0.10 Identities = 25/111 (22%), Positives = 46/111 (41%) Frame = -3 Query: 442 KGYVSEEEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWELSE 263 KG +++EE G + + E K +W + NQ + E +K +V + Sbjct: 461 KGLMTQEEVGDNESLSIKEQKAVKGFNFWDERIVDGQWINQPNAEL--IQKFFRVLAICH 518 Query: 262 KLVGLA*SPTGRLSGEVSNPDRSSFRTKLRNFVLLFSSKKKGKIIVGHVSH 110 + S TG ++ E +PD ++F R F S+ + I + + H Sbjct: 519 TAIPDVNSDTGEITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDH 569
>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 334 Score = 33.5 bits (75), Expect = 0.39 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 1/97 (1%) Frame = -3 Query: 535 LYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTK-SGVY 359 L+PG + T HIPL L P F + + E + + P + SG Y Sbjct: 243 LHPGIVRTNLGRHIHIPL--LARPLFNLVSWAFFKTPLEGAQTSIYLACSPDVEGVSGRY 300 Query: 358 WSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGL 248 + K E +L +A D ARK+W++SE +VG+ Sbjct: 301 FGDCK-----EEELLPKAMDESVARKLWDISEVMVGI 332
>YEL8_YEAST (P39943) Hypothetical 43.1 kDa protein in GAL83-YPT8 intergenic| region Length = 394 Score = 33.1 bits (74), Expect = 0.51 Identities = 41/141 (29%), Positives = 57/141 (40%) Frame = +3 Query: 3 ITNRSEKN*FYRLKLTCEL*PLRT*PGAPHT*PSSLCETCPTIIFPFFLLEKRSTKFRNL 182 I N N + L P+ P PH PSSL T T I + ++ F+ L Sbjct: 130 IRNTGNNNGIVETQAPAILVPVINIPNDPHPIPSSLSTTSITSIASVY---PSTSPFQYL 186 Query: 183 VRNDDRSGFETSPESRPVGDHASPTSFSLSSQTFLAFSVSLASSESWFSKDAEFLFQLQ* 362 +SGF P S P H+S +S +L L+S+ S FSK L + Sbjct: 187 -----KSGFPEDPASTPY-VHSSGSSLALG---------ELSSNSSIFSKSRRNLAAMS- 230 Query: 363 TPDLVRLGSLTTCASLLPASS 425 PD + + ASLL +S Sbjct: 231 GPDSLSSSKNQSSASLLSQTS 251
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 30.8 bits (68), Expect = 2.5 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = -3 Query: 394 VSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 245 V+E SG Y+ + A S EA D E AR++W S +LVGLA Sbjct: 276 VAEELENVSGKYFDGLREKAP-----SPEAEDEEVARRLWTESARLVGLA 320
>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 30.8 bits (68), Expect = 2.5 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 316 SEEASDTEKARKVWELSEKLV 254 SEEA E AR +WELSE+L+ Sbjct: 385 SEEAQSEETARALWELSERLI 405
>DPO3B_HELPY (O25242) DNA polymerase III beta subunit (EC 2.7.7.7)| Length = 374 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -3 Query: 469 FPPFQKYITKGYVSEEEAGK-RLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEASDTE 293 +P +QK + K Y+S GK + + S S + + KN+A FE+ L E S+T Sbjct: 242 YPDYQKILPKEYISSFTLGKEEFKESIKLCSSLSSTIKLTLEKNNALFES-LDSEHSETA 300 Query: 292 K 290 K Sbjct: 301 K 301
>YLJ2_CAEEL (P34367) Hypothetical protein C50C3.2 in chromosome III| Length = 2107 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -3 Query: 424 EEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWE 272 +E+GK + + + S+ WN+ SA+F+ L A+DT KV E Sbjct: 119 DESGKEIFDEIRKCSMV-------WNEISATFQQMLDPTATDTSNYEKVHE 162
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = -3 Query: 394 VSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGL 248 V+E SG Y+ K A + EA D E AR++W S +LVGL Sbjct: 276 VAEELADVSGKYFDGLKQKAP-----APEAEDEEVARRLWAESARLVGL 319
>CAPZA_NEUCR (Q9P5K9) Probable F-actin capping protein alpha subunit| Length = 269 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/64 (25%), Positives = 32/64 (50%) Frame = -3 Query: 484 LFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEA 305 L L P FQKY + + + + G ++S S + G Y+ +S+ + ++++A Sbjct: 33 LLNELGPAFQKYNEEQFTTVKLPGGSQPVIISSHSSLEDGRYYDVESSSSFAYDHITQKA 92 Query: 304 SDTE 293 SD + Sbjct: 93 SDVQ 96
>TRMU_LACAC (Q5FKU0) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 375 Score = 29.3 bits (64), Expect = 7.4 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = +3 Query: 198 RSGFETSPESRPVGDHASPTSFSLSSQTFLAFSVSLASSESWF 326 +SG +PE + VG+HA +++ + L + S++ WF Sbjct: 218 KSGKMVTPEGKVVGEHAGLMYYTIGQRQGLGLGSTKESTDPWF 260
>PTGDS_RAT (P22057) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 189 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 291 FSVSLASSESWFSKDAEFLFQLQ*TPDLVRLGSLTTCASLLPASSSDTYPLVM 449 +S LAS+ SWF + E LF Q G L ++ L + +T +V+ Sbjct: 44 YSAGLASNSSWFREKKELLFMCQTVVAPSTEGGLNLTSTFLRKNQCETKVMVL 96
>MOBA_THIFE (P22898) Protein mobA (Fragment)| Length = 409 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = -2 Query: 269 QREARRARMIT-DWPALRRGLKP-RSVVIPHQVAKFCASFLKQKKRKNNCRTRFAQTARL 96 Q++ARR ++ +W L RSV+ Q A+ A K +K++ R +F L Sbjct: 275 QQKARRDELMRGNWKGKGEVLNAMRSVIAAEQAAEKAALKEKHQKQREQHRQQFRPYPDL 334 Query: 95 SMWR-----PRLSPKWLQFTSE 45 W+ P L+ +W SE Sbjct: 335 EQWQRMQKSPELAEQWRHRASE 356
>CN094_HUMAN (Q9H6D7) Protein C14orf94| Length = 363 Score = 28.9 bits (63), Expect = 9.6 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3 Query: 316 SEEASDTEKARKVWELSEKLVG 251 S+ S+T KA KVW+L+E LVG Sbjct: 187 SDADSETVKAAKVWKLAEVLVG 208
>MYC_ASTVU (Q17103) Myc protein (c-myc) (Fragment)| Length = 407 Score = 28.9 bits (63), Expect = 9.6 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Frame = -3 Query: 529 PGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYWSW 350 P +A G R +L P +K T+G + E + + + ++ S + G Sbjct: 239 PISVALVGSLRGRPSTATILSIPIKKLKTEGNLEEVKQILQKSNLIRSSSGSSRGSSRGC 298 Query: 349 NKNSASFE-NQLSEEASDTEKARK 281 ++NS+S NQ+S +SD+E K Sbjct: 299 SRNSSSRRVNQVSHPSSDSEDTEK 322
>DAPA_XANCP (Q8P9V6) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 302 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = +2 Query: 350 PAPVDAGLGEAGLADDLRQPLAGLLLGHVPLGDVL 454 P PV A L AG+ LR PL L H P D L Sbjct: 250 PIPVKALLQRAGIGHGLRLPLLPLSAAHQPAADRL 284
>DAPA_XANAC (Q8PLN5) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 302 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = +2 Query: 350 PAPVDAGLGEAGLADDLRQPLAGLLLGHVPLGDVL 454 P PV A L AG+ LR PL L H P D L Sbjct: 250 PIPVKALLQRAGIGHGLRLPLLPLSAAHQPAADRL 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,036,942 Number of Sequences: 219361 Number of extensions: 1082070 Number of successful extensions: 3704 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3605 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3697 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
