>ref|XM_475500.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 918

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 244 cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
           |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 903 cttttgcttcttcgtgtgctccttgtttttcttggcctcacggcgctccc 854

>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0013J02, complete sequence
          Length = 118026

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                               
Query: 244   cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
             |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 28353 cttttgcttcttcgtgtgctccttgtttttcttggcctcacggcgctccc 28402

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                                  
Query: 244      cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
                |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 24841468 cttttgcttcttcgtgtgctccttgtttttcttggcctcacggcgctccc 24841517

>dbj|AK106697.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-D09, full
            insert sequence
          Length = 1617

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                              
Query: 244  cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
            |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 1362 cttttgcttcttcgtgtgctccttgtttttcttggcctcacggcgctccc 1313

>ref|NM_193787.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 933

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 244 cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
           |||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 918 cttttgcttctttgagtggtccttgtttttcttggcttcacgacgctccc 869

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 244      cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
                |||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 18137191 cttttgcttctttgagtggtccttgtttttcttggcttcacgacgctccc 18137240

>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504D03
          Length = 139201

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                
Query: 244    cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
              |||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 113632 cttttgcttctttgagtggtccttgtttttcttggcttcacgacgctccc 113681

>dbj|AK100776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120C10, full
            insert sequence
          Length = 1349

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 244  cttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctccc 293
            |||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 1057 cttttgcttctttgagtggtccttgtttttcttggcttcacgacgctccc 1008

>gb|AY103809.1| Zea mays PCO095316 mRNA sequence
          Length = 1497

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                        
Query: 242  accttttgcttcttcgagtgctccttgtttttcttggcatcacggcgctcccgnttcaga 301
            |||||||||||||| ||||   ||| |||||||||||| |||||||||||||  || || 
Sbjct: 1074 accttttgcttctttgagt---cctggtttttcttggcttcacggcgctccctctttagt 1018

                      
Query: 302  ccctttatgt 311
            ||||||||||
Sbjct: 1017 ccctttatgt 1008

>gb|AF484083.1| Lymnaea stagnalis voltage-dependent non-L-type calcium channel
            alpha-1 subunit isoform b mRNA, complete cds,
            alternatively spliced
          Length = 5603

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  agccttctccagtggtcact 227
            ||||||||||||||||||||
Sbjct: 3431 agccttctccagtggtcact 3412

>gb|AF484082.1| Lymnaea stagnalis voltage-dependent non-L-type calcium channel
            alpha-1 subunit isoform A mRNA, complete cds,
            alternatively spliced
          Length = 8239

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  agccttctccagtggtcact 227
            ||||||||||||||||||||
Sbjct: 3389 agccttctccagtggtcact 3370

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     ttatgtctgatagagaagct 85
              ||||||||||||||||||||
Sbjct: 821436 ttatgtctgatagagaagct 821417

>gb|AE008651.1| Rickettsia conorii str. Malish 7, section 83 of 114 of the complete
            genome
          Length = 10098

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ttatgtctgatagagaagct 85
            ||||||||||||||||||||
Sbjct: 8117 ttatgtctgatagagaagct 8098

>gb|AC131594.10| Mus musculus chromosome 15, clone RP24-568P18, complete sequence
          Length = 181495

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     aaaacaaaatacttgtaacatatg 45
              |||||||||||| |||||||||||
Sbjct: 112964 aaaacaaaatacatgtaacatatg 112987

>ref|XM_656940.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4428.2), mRNA
          Length = 1668

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 gtggtcactcagggctttcg 238
           ||||||||||||||||||||
Sbjct: 955 gtggtcactcagggctttcg 974

>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     ttatgtctgatagagaagct 85
              ||||||||||||||||||||
Sbjct: 312703 ttatgtctgatagagaagct 312722

>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      ttatgtctgatagagaagct 85
               ||||||||||||||||||||
Sbjct: 1146867 ttatgtctgatagagaagct 1146848

>emb|AJ235272.1|RPXX03 Rickettsia prowazekii strain Madrid E, complete genome; segment 3/4
          Length = 279110

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     ttatgtctgatagagaagct 85
              ||||||||||||||||||||
Sbjct: 218314 ttatgtctgatagagaagct 218295

>gb|AC079345.5| Homo sapiens BAC clone RP11-181C18 from 4, complete sequence
          Length = 171325

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tccagtggtcactcagggct 234
            ||||||||||||||||||||
Sbjct: 4604 tccagtggtcactcagggct 4585

>gb|L37761.1|ACCPHAABC Acinetobacter sp. (strain RA3849) ORF, complete cds;
            beta-ketothiolase (phaA) gene, complete cds;
            acetoacetyl-CoA reductase (phaB) gene, complete cds;
            polyhydroxyalkanoic acid synthase (phaC) gene, complete
            cds
          Length = 5617

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  tttcttggcatcacggcgct 290
            ||||||||||||||||||||
Sbjct: 5321 tttcttggcatcacggcgct 5302


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,700,897
Number of Sequences: 3902068
Number of extensions: 2700897
Number of successful extensions: 40279
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40227
Number of HSP's gapped (non-prelim): 51
length of query: 318
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 296
effective length of database: 17,147,199,772
effective search space: 5075571132512
effective search space used: 5075571132512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)