| Clone Name | rbaal22a13 |
|---|---|
| Clone Library Name | barley_pub |
>ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disintegrin and| metalloproteinase domain 10) (Kuzbanian protein homolog) (xKuz) Length = 749 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = +3 Query: 33 YKHNGSVILRRRE--RLARDACMLFIRDSPHRFFSRYVRTHERGYADACPRVRA 188 ++ +G VILR++ + ++ C LFI+ + H F+ RY T E A V+A Sbjct: 201 HEDSGPVILRKKRAAQAEKNTCQLFIQ-TDHLFYKRYGETREAVIAQISSHVKA 253
>ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) Length = 670 Score = 30.4 bits (67), Expect = 2.8 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 Query: 476 SHPVRLVPYNPDFLDESVLWTESRD 402 SH R+ P PD ++E + WT+ RD Sbjct: 231 SHLKRVTPCQPDHVEEEIPWTDDRD 255
>META_ERWCT (Q6D009) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine| O-transsuccinylase) (HTS) Length = 309 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/65 (27%), Positives = 33/65 (50%) Frame = -1 Query: 467 VRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVL 288 +RL+ +P +D +L +SR+ N +NN Y NFD + + + G + G + L Sbjct: 55 LRLLSNSPLQIDIQLLRIDSRESKN--TPTEHLNNFYCNFDDIQDENFDGLIVTGAPLGL 112 Query: 287 WKWCE 273 +C+ Sbjct: 113 VDFCD 117
>XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) Length = 477 Score = 30.4 bits (67), Expect = 2.8 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 308 DGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCM------HGSRTYAWTCIG 162 DGT++ LW G NQ+W AG+ D+C+ +GS+ ++C G Sbjct: 374 DGTQLQLWDCHSGTNQQWAATD---AGELRVYGDKCLDAAGTSNGSKVQIYSCWG 425
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 30.4 bits (67), Expect = 2.8 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +2 Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 487 +R PRP +P RPG+PG DA GG RG Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 30.4 bits (67), Expect = 2.8 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +2 Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 487 +R PRP +P RPG+PG DA GG RG Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 30.0 bits (66), Expect = 3.7 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 398 PRPCSPSTAPTRPGSPGCT-APDAQGGTGRGSA 493 P P P +P +PG PG AP A G G+G++ Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGAS 136
>SPR2F_MOUSE (O70557) Small proline-rich protein 2F| Length = 76 Score = 30.0 bits (66), Expect = 3.7 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 392 RCPRPCSPSTAPTRPGSPGCTAP 460 +CP PCSPS P P C P Sbjct: 22 KCPEPCSPSVCPEPCPPPKCPEP 44
>HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subunit) (HA1)| Length = 285 Score = 29.6 bits (65), Expect = 4.8 Identities = 15/56 (26%), Positives = 27/56 (48%) Frame = -1 Query: 341 LNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCMHGSRTYAW 174 LN D++ + +VLW+W + Q+W I+ Y + A + +C +R W Sbjct: 157 LNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIE--YNETKSAYTL-KCQENNRYLTW 209
>SASH1_MOUSE (P59808) SAM and SH3 domain-containing protein 1| Length = 1230 Score = 29.3 bits (64), Expect = 6.3 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Frame = +2 Query: 389 SRCPRPCSPS-TAPTRPGSPGCTAP 460 S CP P P ++ T PGSP CT P Sbjct: 1016 SDCPSPREPRPSSGTEPGSPACTRP 1040
>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)| (HDC) Length = 290 Score = 29.3 bits (64), Expect = 6.3 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +2 Query: 395 CPRPCSPSTAPTRPGSPGCTAPDAQGG 475 CPR P + T P P C AP+ GG Sbjct: 54 CPRCPEPKSCDTPPPCPRCPAPELLGG 80
>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 498 Score = 29.3 bits (64), Expect = 6.3 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -1 Query: 503 QAIKHSLGQSHPVRLVPY------NPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDA 342 Q I+ + +HP + P NP+ D L+ R++GNGF + + FDA Sbjct: 377 QLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAARFDA 436
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 29.3 bits (64), Expect = 6.3 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -3 Query: 474 PPCASGAVQPGLPGRVGAVDGEQGRGQRLQVRAHGE 367 P G P GR G V G++GR +QVR G+ Sbjct: 46 PASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRDGGK 81
>GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-5) (Cellulase E5) Length = 466 Score = 28.9 bits (63), Expect = 8.2 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Frame = +2 Query: 404 PCSPSTAPTRPGSPGCTAPD--AQGGTG 481 PC + P PG PG +PD Q GTG Sbjct: 135 PCDEGSEPGGPGGPGTPSPDPGTQPGTG 162
>AGALC_ASPNG (Q9UUZ4) Alpha-galactosidase C precursor (EC 3.2.1.22) (Melibiase)| Length = 747 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -3 Query: 489 LPRPVPPCASGAVQPGLPGRVGAVDGEQGRG 397 +P PV P +G V G+PGR+ +QGRG Sbjct: 74 IPSPVEPAVNGWV--GMPGRIRREFPDQGRG 102
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 28.9 bits (63), Expect = 8.2 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 398 PRPCSPSTAPTRPGSPGCTAPDAQGG 475 P P T P+ +PG T+PD+ GG Sbjct: 635 PPPARGDTPPSEGSAPGSTSPDSPGG 660 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,762,037 Number of Sequences: 219361 Number of extensions: 1412047 Number of successful extensions: 5866 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5830 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)