ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal22a13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disinte... 32 1.3
2ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (A... 30 2.8
3META_ERWCT (Q6D009) Homoserine O-succinyltransferase (EC 2.3.1.4... 30 2.8
4XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1... 30 2.8
5IF2_MYCTU (P65131) Translation initiation factor IF-2 30 2.8
6IF2_MYCBO (P65132) Translation initiation factor IF-2 30 2.8
7COL2_CAEEL (P17656) Cuticle collagen 2 precursor 30 3.7
8SPR2F_MOUSE (O70557) Small proline-rich protein 2F 30 3.7
9HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subu... 30 4.8
10SASH1_MOUSE (P59808) SAM and SH3 domain-containing protein 1 29 6.3
11IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain dise... 29 6.3
12SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 29 6.3
13RL21_ARCFU (O28743) 50S ribosomal protein L21e 29 6.3
14GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4) (En... 29 8.2
15AGALC_ASPNG (Q9UUZ4) Alpha-galactosidase C precursor (EC 3.2.1.2... 29 8.2
16M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kin... 29 8.2

>ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disintegrin and|
           metalloproteinase domain 10) (Kuzbanian protein homolog)
           (xKuz)
          Length = 749

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 33  YKHNGSVILRRRE--RLARDACMLFIRDSPHRFFSRYVRTHERGYADACPRVRA 188
           ++ +G VILR++   +  ++ C LFI+ + H F+ RY  T E   A     V+A
Sbjct: 201 HEDSGPVILRKKRAAQAEKNTCQLFIQ-TDHLFYKRYGETREAVIAQISSHVKA 253



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>ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase)
           (ACS) (AceCS)
          Length = 670

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 476 SHPVRLVPYNPDFLDESVLWTESRD 402
           SH  R+ P  PD ++E + WT+ RD
Sbjct: 231 SHLKRVTPCQPDHVEEEIPWTDDRD 255



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>META_ERWCT (Q6D009) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine|
           O-transsuccinylase) (HTS)
          Length = 309

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 467 VRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVL 288
           +RL+  +P  +D  +L  +SR+  N       +NN Y NFD +  + + G +  G  + L
Sbjct: 55  LRLLSNSPLQIDIQLLRIDSRESKN--TPTEHLNNFYCNFDDIQDENFDGLIVTGAPLGL 112

Query: 287 WKWCE 273
             +C+
Sbjct: 113 VDFCD 117



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>XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 477

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 308 DGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCM------HGSRTYAWTCIG 162
           DGT++ LW    G NQ+W       AG+     D+C+      +GS+   ++C G
Sbjct: 374 DGTQLQLWDCHSGTNQQWAATD---AGELRVYGDKCLDAAGTSNGSKVQIYSCWG 425



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>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 487
           +R PRP +P     RPG+PG    DA GG  RG
Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234



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>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 487
           +R PRP +P     RPG+PG    DA GG  RG
Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234



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>COL2_CAEEL (P17656) Cuticle collagen 2 precursor|
          Length = 301

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 398 PRPCSPSTAPTRPGSPGCT-APDAQGGTGRGSA 493
           P P  P  +P +PG PG   AP A G  G+G++
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGAS 136



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>SPR2F_MOUSE (O70557) Small proline-rich protein 2F|
          Length = 76

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 392 RCPRPCSPSTAPTRPGSPGCTAP 460
           +CP PCSPS  P     P C  P
Sbjct: 22  KCPEPCSPSVCPEPCPPPKCPEP 44



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>HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subunit) (HA1)|
          Length = 285

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -1

Query: 341 LNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCMHGSRTYAW 174
           LN D++     +   +VLW+W +   Q+W I+  Y   + A  + +C   +R   W
Sbjct: 157 LNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIE--YNETKSAYTL-KCQENNRYLTW 209



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>SASH1_MOUSE (P59808) SAM and SH3 domain-containing protein 1|
          Length = 1230

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 389  SRCPRPCSPS-TAPTRPGSPGCTAP 460
            S CP P  P  ++ T PGSP CT P
Sbjct: 1016 SDCPSPREPRPSSGTEPGSPACTRP 1040



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>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)|
           (HDC)
          Length = 290

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 395 CPRPCSPSTAPTRPGSPGCTAPDAQGG 475
           CPR   P +  T P  P C AP+  GG
Sbjct: 54  CPRCPEPKSCDTPPPCPRCPAPELLGG 80



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>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 498

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = -1

Query: 503 QAIKHSLGQSHPVRLVPY------NPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDA 342
           Q I+ +   +HP  + P       NP+  D   L+   R++GNGF  +    +    FDA
Sbjct: 377 QLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAARFDA 436



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>RL21_ARCFU (O28743) 50S ribosomal protein L21e|
          Length = 97

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 474 PPCASGAVQPGLPGRVGAVDGEQGRGQRLQVRAHGE 367
           P    G   P   GR G V G++GR   +QVR  G+
Sbjct: 46  PASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRDGGK 81



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>GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E-4) (Cellulase E-5) (Cellulase
           E5)
          Length = 466

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 404 PCSPSTAPTRPGSPGCTAPD--AQGGTG 481
           PC   + P  PG PG  +PD   Q GTG
Sbjct: 135 PCDEGSEPGGPGGPGTPSPDPGTQPGTG 162



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>AGALC_ASPNG (Q9UUZ4) Alpha-galactosidase C precursor (EC 3.2.1.22) (Melibiase)|
          Length = 747

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 489 LPRPVPPCASGAVQPGLPGRVGAVDGEQGRG 397
           +P PV P  +G V  G+PGR+     +QGRG
Sbjct: 74  IPSPVEPAVNGWV--GMPGRIRREFPDQGRG 102



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>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 859

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 398 PRPCSPSTAPTRPGSPGCTAPDAQGG 475
           P P    T P+   +PG T+PD+ GG
Sbjct: 635 PPPARGDTPPSEGSAPGSTSPDSPGG 660


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,762,037
Number of Sequences: 219361
Number of extensions: 1412047
Number of successful extensions: 5866
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5830
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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