>Y126_ADE07 (P05670) Hypothetical 12.6 kDa early protein|
          Length = 114

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -2

Query: 554 RAARGPGGAEDHPSSRRGSC---QFYGHRVVARG-RHTARSRESGQDLRAPGDQHPAAPP 387
           R  R    A  H  S R +    +  GH   A+G R+ A  R   Q  R  GDQ P+ PP
Sbjct: 41  RPVRALDTASKHARSNRATAAQKEKQGHGGSAQGARNPASHRHLHQ--RTRGDQVPSEPP 98

Query: 386 GRPRQ 372
            RPR+
Sbjct: 99  SRPRK 103

>TPSX_SCHPO (O14081) Putative alpha,alpha-trehalose-phosphate synthase|
           [UDP-forming] subunit 106 kDa subunit (EC 2.4.1.15)
           (Trehalose-6-phosphate synthase)
           (UDP-glucose-glucosephosphate glucosyltransferase)
          Length = 944

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 470 ARGRHTARSRESGQDLRAPGDQHPAAPP 387
           +RGRH A S+  G +L  P  +H + PP
Sbjct: 121 SRGRHMAFSKNDGTNLSLPPSRHQSPPP 148

>TPR_HUMAN (P12270) Nucleoprotein TPR|
          Length = 2349

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 12   HKSQSPPMITTTT---ATPQHTEGGDERNRHFCRSMSTVVVSDRSL 140
            H SQS PM+TT+T   +T   T  GD+ +  F  + S  + S+  L
Sbjct: 2222 HASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGL 2267

>PS1C2_PANTR (Q7YR45) Psoriasis susceptibility 1 candidate gene 2 protein|
           homolog precursor (SPR1 protein)
          Length = 136

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/53 (37%), Positives = 21/53 (39%)
 Frame = -2

Query: 545 RGPGGAEDHPSSRRGSCQFYGHRVVARGRHTARSRESGQDLRAPGDQHPAAPP 387
           RG  G+EDHPS              A  R  A S    Q    PGD  P APP
Sbjct: 18  RGISGSEDHPS-----------HPPAEDREEAGSPTLPQGPPVPGDPWPGAPP 59

>RSEA_ECOLI (P0AFX7) Sigma-E factor negative regulatory protein|
          Length = 216

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 17  IAIASNDNNNNGDPAAYRGGRRKEPSFLQVYVHRRRVGPEPLRLPLAQVQREA 175
           + + S    NNG     +  RR+  + LQ Y  +RR+  E L+   AQ Q+ A
Sbjct: 150 LGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAA 202

>RSEA_ECOL6 (P0AFX8) Sigma-E factor negative regulatory protein|
          Length = 216

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 17  IAIASNDNNNNGDPAAYRGGRRKEPSFLQVYVHRRRVGPEPLRLPLAQVQREA 175
           + + S    NNG     +  RR+  + LQ Y  +RR+  E L+   AQ Q+ A
Sbjct: 150 LGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAA 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,645,009
Number of Sequences: 219361
Number of extensions: 1400217
Number of successful extensions: 4793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4784
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)