ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21j04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy... 64 1e-10
2MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy... 41 6e-04
3MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M... 40 0.001
4MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy... 37 0.015
5MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy... 32 0.29
6CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Ca... 32 0.38
7HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1) 31 0.64
8MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ... 31 0.84
9CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca... 30 1.1
10CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc... 30 1.1
11MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is... 30 1.4
12CAPS1_XENLA (Q6GLR7) Calcium-dependent secretion activator 1 (Ca... 29 3.2
13PPE1_MOUSE (O35655) Serine/threonine-protein phosphatase with EF... 28 5.4
14ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP ... 28 7.1
15NKX25_MOUSE (P42582) Homeobox protein Nkx-2.5 (Homeobox protein ... 28 7.1
16IMDH_BACSU (P21879) Inosine-5'-monophosphate dehydrogenase (EC 1... 27 9.3
17KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C... 27 9.3

>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKAS-DMSELERQGLAFAXQE-SKXXVPD- 203
           WV KG + G+F  GG + +Y  +S     K   + D+ ELER+GL FA    S+  VP+ 
Sbjct: 378 WVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEV 437

Query: 202 ------------SGVTLGEKPTFVWYATAGVVAAVSISAF 119
                       + V + +KP +VW+A  GVV A S++AF
Sbjct: 438 KDIPSAEMVKQSASVVMIKKPLYVWHAATGVVVAASVAAF 477



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>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227
           WV  G + GAF  GG+  +  AL+ V   +  A  + EL +QG++FA +
Sbjct: 385 WVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQGISFAAK 433



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>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227
           W+ +G + GAF  GG   +  A++ V   K    D+++L  +GL+FA +
Sbjct: 384 WIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEEGLSFASK 432



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>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227
           WV  G + G F  GG + ++ A++ V   +     +  L  +GL+FA +
Sbjct: 387 WVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEEGLSFATK 435



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>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFA 233
           W+ +  + GAF  GG+  +  A++ +   +     +  L ++GL+FA
Sbjct: 386 WIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432



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>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39
           C   DL+++L VR + PQ +K    L A G N WK
Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537



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>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 5/75 (6%)
 Frame = -2

Query: 210 CLTAGLPSAKSPXSYGMQRQGSLRQCRSPRSVIGTAGSAAGGETR-----DRFAGGWDXL 46
           C     P+A SP      R G    CR     I   G   G ETR     D  A   D  
Sbjct: 83  CARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAETRPGRGEDGPARQTDRG 142

Query: 45  LEGRRKIYCLHTVTW 1
             GRR  +C H   W
Sbjct: 143 PGGRRAAHCSHVPPW 157



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>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227
           W+  G I GAF   G+  +  A++ V   +  A+ + +L ++G++FA +
Sbjct: 385 WIKDGKIVGAFLESGSPEENKAIAKVAKVQPPAT-LDQLAQEGISFASK 432



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>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



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>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



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>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -1

Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227
           W+  G + GAF   G+  +  A++ V   +        L ++G++FA +
Sbjct: 385 WIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDLLLKEGISFASK 433



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>CAPS1_XENLA (Q6GLR7) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1299

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 470 CPDHDLKIKLAVRMDKPQNMKHCGYLWVIGKNVWK 504



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>PPE1_MOUSE (O35655) Serine/threonine-protein phosphatase with EF-hands 1 (EC|
           3.1.3.16) (PPEF-1) (Protein phosphatase with EF
           calcium-binding domain) (PPEF) (DRES10) (Fragment)
          Length = 270

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 101 PAVPITERGDRHCRNDPCRCIPYEXGLFAEGNPAV 205
           PA  IT  GD H + D    I Y+ GL +E NP V
Sbjct: 182 PAKEITICGDLHGKLDDLMLIFYKNGLPSENNPYV 216



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>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 303

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 200 RGYPRRKAHXRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 75
           RG  R   H  +VC   RG CG+ ++++    RQ+   ++  G
Sbjct: 70  RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112



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>NKX25_MOUSE (P42582) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)|
           (Cardiac-specific homeobox) (Homeobox protein CSX)
          Length = 318

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 86  PPAALPAVPITERGDRHCRNDPCRCIP-YEXGLFAEG 193
           PPA   AVP+  R  + C  DP    P Y  GL A G
Sbjct: 209 PPARRIAVPVLVRDGKPCLGDPAAYAPAYGVGLNAYG 245



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>IMDH_BACSU (P21879) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD) (Superoxide-inducible
           protein 12) (SOI12)
          Length = 488

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 158 NGRGRCGSVDLRVRLLVRQEAPQVVKPGIGLR 63
           +G G CGS DLR    +R+EA  +   G GLR
Sbjct: 441 SGMGYCGSKDLRA---LREEAQFIRMTGAGLR 469



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>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 59  PPANRSRVSP-PAALPAVPITERGDRHCRNDPCRCIP 166
           PP  +    P PAA PA P   RG    R +PC  +P
Sbjct: 37  PPQQQQPAQPGPAASPAGPPAPRGPGGRRAEPCPGLP 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,073,865
Number of Sequences: 219361
Number of extensions: 916034
Number of successful extensions: 2322
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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