| Clone Name | rbaal21j04 |
|---|---|
| Clone Library Name | barley_pub |
>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic| isoform 2 (EC 1.6.5.4) (MDAR 2) Length = 488 Score = 63.5 bits (153), Expect = 1e-10 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 15/100 (15%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKAS-DMSELERQGLAFAXQE-SKXXVPD- 203 WV KG + G+F GG + +Y +S K + D+ ELER+GL FA S+ VP+ Sbjct: 378 WVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEV 437 Query: 202 ------------SGVTLGEKPTFVWYATAGVVAAVSISAF 119 + V + +KP +VW+A GVV A S++AF Sbjct: 438 KDIPSAEMVKQSASVVMIKKPLYVWHAATGVVVAASVAAF 477
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 41.2 bits (95), Expect = 6e-04 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227 WV G + GAF GG+ + AL+ V + A + EL +QG++FA + Sbjct: 385 WVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQGISFAAK 433
>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227 W+ +G + GAF GG + A++ V K D+++L +GL+FA + Sbjct: 384 WIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEEGLSFASK 432
>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic| isoform 1 (EC 1.6.5.4) (MDAR 1) Length = 441 Score = 36.6 bits (83), Expect = 0.015 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227 WV G + G F GG + ++ A++ V + + L +GL+FA + Sbjct: 387 WVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEEGLSFATK 435
>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic| isoform 4 (EC 1.6.5.4) (MDAR 4) Length = 435 Score = 32.3 bits (72), Expect = 0.29 Identities = 12/47 (25%), Positives = 25/47 (53%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFA 233 W+ + + GAF GG+ + A++ + + + L ++GL+FA Sbjct: 386 WIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432
>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1353 Score = 32.0 bits (71), Expect = 0.38 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -3 Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39 C DL+++L VR + PQ +K L A G N WK Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537
>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)| Length = 892 Score = 31.2 bits (69), Expect = 0.64 Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 5/75 (6%) Frame = -2 Query: 210 CLTAGLPSAKSPXSYGMQRQGSLRQCRSPRSVIGTAGSAAGGETR-----DRFAGGWDXL 46 C P+A SP R G CR I G G ETR D A D Sbjct: 83 CARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAETRPGRGEDGPARQTDRG 142 Query: 45 LEGRRKIYCLHTVTW 1 GRR +C H W Sbjct: 143 PGGRRAAHCSHVPPW 157
>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227 W+ G I GAF G+ + A++ V + A+ + +L ++G++FA + Sbjct: 385 WIKDGKIVGAFLESGSPEENKAIAKVAKVQPPAT-LDQLAQEGISFASK 432
>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1355 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39 C DL+++L VR + PQ +K L G N WK Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535
>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) (rCAPS) Length = 1289 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39 C DL+++L VR + PQ +K L G N WK Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535
>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC| 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) Length = 434 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/49 (24%), Positives = 24/49 (48%) Frame = -1 Query: 373 WVSKGXITGAFXXGGNRXDYXALSVVVXCKTKASDMSELERQGLAFAXQ 227 W+ G + GAF G+ + A++ V + L ++G++FA + Sbjct: 385 WIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDLLLKEGISFASK 433
>CAPS1_XENLA (Q6GLR7) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1299 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 143 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGXNCWK 39 C DL+++L VR + PQ +K L G N WK Sbjct: 470 CPDHDLKIKLAVRMDKPQNMKHCGYLWVIGKNVWK 504
>PPE1_MOUSE (O35655) Serine/threonine-protein phosphatase with EF-hands 1 (EC| 3.1.3.16) (PPEF-1) (Protein phosphatase with EF calcium-binding domain) (PPEF) (DRES10) (Fragment) Length = 270 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +2 Query: 101 PAVPITERGDRHCRNDPCRCIPYEXGLFAEGNPAV 205 PA IT GD H + D I Y+ GL +E NP V Sbjct: 182 PAKEITICGDLHGKLDDLMLIFYKNGLPSENNPYV 216
>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 303 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -3 Query: 200 RGYPRRKAHXRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 75 RG R H +VC RG CG+ ++++ RQ+ ++ G Sbjct: 70 RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112
>NKX25_MOUSE (P42582) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (Cardiac-specific homeobox) (Homeobox protein CSX) Length = 318 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +2 Query: 86 PPAALPAVPITERGDRHCRNDPCRCIP-YEXGLFAEG 193 PPA AVP+ R + C DP P Y GL A G Sbjct: 209 PPARRIAVPVLVRDGKPCLGDPAAYAPAYGVGLNAYG 245
>IMDH_BACSU (P21879) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) (Superoxide-inducible protein 12) (SOI12) Length = 488 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 Query: 158 NGRGRCGSVDLRVRLLVRQEAPQVVKPGIGLR 63 +G G CGS DLR +R+EA + G GLR Sbjct: 441 SGMGYCGSKDLRA---LREEAQFIRMTGAGLR 469
>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 757 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +2 Query: 59 PPANRSRVSP-PAALPAVPITERGDRHCRNDPCRCIP 166 PP + P PAA PA P RG R +PC +P Sbjct: 37 PPQQQQPAQPGPAASPAGPPAPRGPGGRRAEPCPGLP 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,073,865 Number of Sequences: 219361 Number of extensions: 916034 Number of successful extensions: 2322 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2247 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2319 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)