>emb|AJ345035.1|HVU345035 Hordeum vulgare partial mRNA for monodehydroascorbate reductase
          Length = 1250

 Score =  603 bits (304), Expect = e-169
 Identities = 352/373 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1    ccaagtaactgtatgtaaacaatagatcttcctccttccttccagcagttnatcccagcc 60
            |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1150 ccaagtaactgtatgtaaacaatagatcttcctccttccttccatcagtttatcccagcc 1091

                                                                        
Query: 61   gcccgcaaaccgatcccgggtttcaccacctgcggcgcttcctgccgtaccaataaccga 120
            |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 gcccgcgaaccgttccggggtttcaccacctgcggcgcttcctgccgtaccaataaccga 1031

                                                                        
Query: 121  acgcggagatcgacactgccgcaacgacccctgccgttgcataccatacgaangtgggct 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1030 acgcggagatcgacactgccgcaacgacccctgccgttgcataccatacgaaggtgggct 971

                                                                        
Query: 181  tttcgccgagggtaaccccgctgtcaggcacnngtntcttgctttcctgnanggcaaacg 240
            |||||||||||||||||||||||||||||||   | ||||||||||||| | ||||||||
Sbjct: 970  tttcgccgagggtaaccccgctgtcaggcacctctttcttgctttcctggatggcaaacg 911

                                                                        
Query: 241  ctaggccttgtctttcaagttcagacatgtccgaggccttggttttacannggacaacca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct: 910  ctaggccttgtctttcaagttcagacatgtccgaggccttggttttacgccggacaacca 851

                                                                        
Query: 301  ccgacaatgcctngtagtcntnccggttcccaccttncangaacgcgcccgtgatntggc 360
            |||||||||||| |||||| | |||||||||||||| || ||||||||||||||| ||||
Sbjct: 850  ccgacaatgcctcgtagtcgtcccggttcccaccttccaggaacgcgcccgtgatctggc 791

                         
Query: 361  ccttactgaccca 373
            |||||||||||||
Sbjct: 790  ccttactgaccca 778

>gb|BT009417.1| Triticum aestivum clone wlmk1.pk0007.f9:fis, full insert mRNA
            sequence
          Length = 1821

 Score =  335 bits (169), Expect = 6e-89
 Identities = 257/291 (88%)
 Strand = Plus / Minus

                                                                        
Query: 83   tcaccacctgcggcgcttcctgccgtaccaataaccgaacgcggagatcgacactgccgc 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 1583 tcaccacctgcggcgcttcctgccgtaccaataaccgaacgcggagatcgagacggccgc 1524

                                                                        
Query: 143  aacgacccctgccgttgcataccatacgaangtgggcttttcgccgagggtaaccccgct 202
            ||| ||||| ||||| || ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 1523 aacaacccccgccgtcgcgtaccacacgaaggtgggcttctcgccgagggtgaccccgct 1464

                                                                        
Query: 203  gtcaggcacnngtntcttgctttcctgnanggcaaacgctaggccttgtctttcaagttc 262
            |||||||||   | ||||||||||||| | |||||| || ||||||||||||||||||||
Sbjct: 1463 gtcaggcacgtctttcttgctttcctggatggcaaatgccaggccttgtctttcaagttc 1404

                                                                        
Query: 263  agacatgtccgaggccttggttttacannggacaaccaccgacaatgcctngtagtcntn 322
            ||||||||||||| ||||||||||||    |||||||||||| || |||| |||||| | 
Sbjct: 1403 agacatgtccgagaccttggttttacgccagacaaccaccgataacgcctcgtagtcgtc 1344

                                                               
Query: 323  ccggttcccaccttncangaacgcgcccgtgatntggcccttactgaccca 373
            ||||| ||| |||| || ||||||||||||||| |||||||| ||||||||
Sbjct: 1343 ccggtccccgccttccaggaacgcgcccgtgatctggcccttgctgaccca 1293

>ref|XM_467388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1822

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 81   tttcaccacctgcggcgcttcctgccgtaccaataacc 118
            ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1609 tttcaccacctacggcgtttcctgccgtaccaataacc 1572

>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 81     tttcaccacctgcggcgcttcctgccgtaccaataacc 118
              ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 113958 tttcaccacctacggcgtttcctgccgtaccaataacc 113921

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 81       tttcaccacctgcggcgcttcctgccgtaccaataacc 118
                ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 29248673 tttcaccacctacggcgtttcctgccgtaccaataacc 29248710

>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0060O16
          Length = 164373

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 81    tttcaccacctgcggcgcttcctgccgtaccaataacc 118
             ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 46018 tttcaccacctacggcgtttcctgccgtaccaataacc 46055

>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0680A05
          Length = 168092

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 81     tttcaccacctgcggcgcttcctgccgtaccaataacc 118
              ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 138641 tttcaccacctacggcgtttcctgccgtaccaataacc 138678

>dbj|AK065585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M23, full
            insert sequence
          Length = 1821

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 81   tttcaccacctgcggcgcttcctgccgtaccaataacc 118
            ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1608 tttcaccacctacggcgtttcctgccgtaccaataacc 1571

>dbj|AK062096.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H12, full
            insert sequence
          Length = 1246

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 81   tttcaccacctgcggcgcttcctgccgtaccaataacc 118
            ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1051 tttcaccacctacggcgtttcctgccgtaccaataacc 1014

>gb|AY106646.1| Zea mays PCO091252 mRNA sequence
          Length = 1867

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 83   tcaccacctgcggcgcttcctgccgtaccaata 115
            |||||||||||||||||||||||| ||||||||
Sbjct: 1557 tcaccacctgcggcgcttcctgccataccaata 1525

>gb|AC113372.2| Homo sapiens chromosome 5 clone RP11-160H11, complete sequence
          Length = 98328

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aactgtatgtaaacaatagat 27
             |||||||||||||||||||||
Sbjct: 76165 aactgtatgtaaacaatagat 76145

>gb|AC011384.4| Homo sapiens chromosome 5 clone CTB-143D11, complete sequence
          Length = 104475

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aactgtatgtaaacaatagat 27
             |||||||||||||||||||||
Sbjct: 28447 aactgtatgtaaacaatagat 28427

>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence
          Length = 218747

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tcttcctccttccttccagc 46
             ||||||||||||||||||||
Sbjct: 16071 tcttcctccttccttccagc 16090

>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224115

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     gatcttcctccttccttcca 44
              ||||||||||||||||||||
Sbjct: 115312 gatcttcctccttccttcca 115331

>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    atagatcttcctccttcctt 41
             ||||||||||||||||||||
Sbjct: 91398 atagatcttcctccttcctt 91379

>gb|AC005297.1| Homo sapiens X BAC GS1-466O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177503

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     agatcttcctccttccttcc 43
              ||||||||||||||||||||
Sbjct: 114459 agatcttcctccttccttcc 114440

>gb|AC114578.14| Mus musculus chromosome 19, clone RP23-162C4, complete sequence
          Length = 201229

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    tcttcctccttccttccagc 46
             ||||||||||||||||||||
Sbjct: 14017 tcttcctccttccttccagc 13998


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,708,179
Number of Sequences: 3902068
Number of extensions: 2708179
Number of successful extensions: 41050
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41022
Number of HSP's gapped (non-prelim): 28
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)