| Clone Name | rbaal21g21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ001341.1|HVACYLCOA Hordeum vulgare mRNA for putative acyl-CoA oxidase Length = 2273 Score = 912 bits (460), Expect = 0.0 Identities = 496/504 (98%), Gaps = 3/504 (0%) Strand = Plus / Minus Query: 1 aacaaccaatcacctctccccttgatttgatcctcttattaattactgctccacatccgc 60 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 2097 aacaaccaatcacctctccccttgatttgatc-tcttattaattatcgctccacatccgc 2039 Query: 61 tgtccaacatggattgggggacaga-ttcagggaccaaggaaggat-catagcctcgaga 118 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 2038 tgtccaacatggattgggggacagacttcagggaccaaggaaggattcatagcctcgaga 1979 Query: 119 gcttgagctgctgcttgagcagcggccggaggtgctcctggtaaccgtccggcaccaccg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1978 gcttgagctgctgcttgagcagcggccggaggtgctcctggtaaccgtccggcaccaccg 1919 Query: 179 tctcgttcagggggtccttccacgcctcctcgtacagcgccgggtacacgtccccgtcgt 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 tctcgttcagggggtccttccacgcctcctcgtacagcgccgggtacacgtccccgtcgt 1859 Query: 239 accgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtccaccagcgcca 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1858 accgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtccaccagcgcca 1799 Query: 299 ccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattggccagcgcgccct 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1798 ccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattggccagcgcgccct 1739 Query: 359 gcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttgtgcaggaggtgga 418 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1738 gcctggccgtgacgcaccccgtcgacagggagtcgcccaggtgcttgtgcaggaggtgga 1679 Query: 419 gcgcgtagatgctgcacagcttctgaagctgctccttcaccccagggccagggatgtcct 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1678 gcgcgtagatgctgcacagcttctgaagctgctccttcaccccagggccagggatgtcct 1619 Query: 479 cctgcatcttctcgataaacttgg 502 ||| ||||||||||||||||||| Sbjct: 1618 cctcgatcttctcgataaacttgg 1595
>dbj|AK104349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F12, full insert sequence Length = 1045 Score = 351 bits (177), Expect = 1e-93 Identities = 273/305 (89%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 756 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 697 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 696 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 637 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 636 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 577 Query: 283 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 342 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 576 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 517 Query: 343 ttggccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgc 402 || |||||||| |||||||| || |||| || |||||||||||||||||| ||||| ||| Sbjct: 516 tttgccagcgctccctgccttgctgtgatgctccccgtcgacaggaagtcacccagatgc 457 Query: 403 ttgtg 407 ||||| Sbjct: 456 ttgtg 452
>dbj|AK100758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119B01, full insert sequence Length = 2636 Score = 351 bits (177), Expect = 1e-93 Identities = 273/305 (89%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 2176 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 2117 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2116 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 2057 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2056 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 1997 Query: 283 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 342 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 1996 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 1937 Query: 343 ttggccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgc 402 || |||||||| |||||||| || |||| || |||||||||||||||||| ||||| ||| Sbjct: 1936 tttgccagcgctccctgccttgctgtgatgctccccgtcgacaggaagtcacccagatgc 1877 Query: 403 ttgtg 407 ||||| Sbjct: 1876 ttgtg 1872
>dbj|AK098983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M04, full insert sequence Length = 2385 Score = 351 bits (177), Expect = 1e-93 Identities = 273/305 (89%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 2119 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 2060 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2059 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 2000 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1999 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 1940 Query: 283 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 342 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 1939 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 1880 Query: 343 ttggccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgc 402 || |||||||| |||||||| || |||| || |||||||||||||||||| ||||| ||| Sbjct: 1879 tttgccagcgctccctgccttgctgtgatgctccccgtcgacaggaagtcacccagatgc 1820 Query: 403 ttgtg 407 ||||| Sbjct: 1819 ttgtg 1815
>dbj|AK060849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E06, full insert sequence Length = 2445 Score = 351 bits (177), Expect = 1e-93 Identities = 273/305 (89%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 2179 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 2120 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2119 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 2060 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2059 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 2000 Query: 283 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 342 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 1999 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 1940 Query: 343 ttggccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgc 402 || |||||||| |||||||| || |||| || |||||||||||||||||| ||||| ||| Sbjct: 1939 tttgccagcgctccctgccttgctgtgatgctccccgtcgacaggaagtcacccagatgc 1880 Query: 403 ttgtg 407 ||||| Sbjct: 1879 ttgtg 1875
>dbj|AK059993.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D08, full insert sequence Length = 1045 Score = 351 bits (177), Expect = 1e-93 Identities = 273/305 (89%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 756 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 697 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 696 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 637 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 636 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 577 Query: 283 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 342 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 576 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 517 Query: 343 ttggccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgc 402 || |||||||| |||||||| || |||| || |||||||||||||||||| ||||| ||| Sbjct: 516 tttgccagcgctccctgccttgctgtgatgctccccgtcgacaggaagtcacccagatgc 457 Query: 403 ttgtg 407 ||||| Sbjct: 456 ttgtg 452
>ref|XM_476282.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Minus Query: 105 tcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaacc 164 ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 2010 tcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaacc 1951 Query: 165 gtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggta 224 ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1950 gtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccgggta 1891 Query: 225 cacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgc 284 || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1890 aacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaacgc 1831 Query: 285 gtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcatt 344 ||||||||||||||||||||| || ||||| || || || ||||| || |||||||| || Sbjct: 1830 gtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcgtt 1771 Query: 345 ggccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgctt 404 |||||||| |||||||| || |||| || |||||||||||||||||| ||||| ||||| Sbjct: 1770 tgccagcgctccctgccttgctgtgatgctccccgtcgacaggaagtcacccagatgctt 1711 Query: 405 gtg 407 ||| Sbjct: 1710 gtg 1708
>gb|AY105897.1| Zea mays PCO085554 mRNA sequence Length = 2366 Score = 337 bits (170), Expect = 2e-89 Identities = 283/320 (88%), Gaps = 3/320 (0%) Strand = Plus / Minus Query: 109 agcctcgagagcttgagctgctgct---tgagcagcggccggaggtgctcctggtaaccg 165 ||||||||||||||||||||||||| ||| || || ||||||| ||| ||||| || Sbjct: 2105 agcctcgagagcttgagctgctgctgcttgatgagtgggcggaggtactcgtggtacccc 2046 Query: 166 tccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggtac 225 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 2045 tccggcaccaccgtctcgttcagcgggtccttccacgcctcctcgtagagcgcagggtac 1986 Query: 226 acgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcg 285 ||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1985 acgtcgccgtcgtaccgccccagcacagaccccaggtagtggtccgtgtagttgaacgca 1926 Query: 286 tccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattg 345 |||||||||||||| ||||| |||||||| || ||||| |||||||| |||||||| || Sbjct: 1925 tccaccagcgccacagcgttcggacgcacctgcgcgtacagcttgcccagctgctcgttt 1866 Query: 346 gccagcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttg 405 |||||||| |||||||||| ||||| |||||| |||| || ||||||||||||||||||| Sbjct: 1865 gccagcgctccctgcctgggcgtgatgcacccagtcgccaagaagtcgcccaggtgcttg 1806 Query: 406 tgcaggaggtggagcgcgta 425 || |||| || |||||||| Sbjct: 1805 tggaggatgtacagcgcgta 1786
>gb|BT009170.1| Triticum aestivum clone wl1n.pk0102.e8:fis, full insert mRNA sequence Length = 2379 Score = 305 bits (154), Expect = 7e-80 Identities = 316/370 (85%) Strand = Plus / Minus Query: 109 agcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaaccgtcc 168 ||||| ||||||||||||||||||||||||| || ||||||| ||| ||||| || || Sbjct: 2098 agcctggagagcttgagctgctgcttgagcaaggggcggaggtactcgtggtacccctcg 2039 Query: 169 ggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggtacacg 228 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 2038 ggcaccaccgtctcgttcagagggtccttccacgcctcctcgtacagcgctgggtacaca 1979 Query: 229 tccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtcc 288 | ||| ||||||||||||||||| ||||||||||||||||| ||||||| || || ||| Sbjct: 1978 ttcccatcgtaccgccccagcacagaccccaggtagtggtctgtgtagttgaaggcatcc 1919 Query: 289 accagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattggcc 348 |||||||| || || || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 1918 accagcgcaacagcatttggacgcacctgtgcgtaaagcttgcccagctgctcgtttgcc 1859 Query: 349 agcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttgtgc 408 ||||| |||||| ||| |||| |||||| || | |||||||||||||||||||||||| Sbjct: 1858 agcgctccctgcttgggtgtgatgcacccggttgccaggaagtcgcccaggtgcttgtgg 1799 Query: 409 aggaggtggagcgcgtagatgctgcacagcttctgaagctgctccttcaccccagggcca 468 || | || ||| || |||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1798 agaatgtagagggcatagacattgcaaaggttctggagctgttccttcactccaggtcca 1739 Query: 469 gggatgtcct 478 || ||||||| Sbjct: 1738 ggaatgtcct 1729
>gb|AY104290.1| Zea mays PCO085555 mRNA sequence Length = 2558 Score = 303 bits (153), Expect = 3e-79 Identities = 324/381 (85%) Strand = Plus / Minus Query: 109 agcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaaccgtcc 168 ||||| ||||||||||||||||||||||||| || ||||||| ||| ||||| || || Sbjct: 2164 agcctggagagcttgagctgctgcttgagcaaggggcggaggtactcgtggtacccctcg 2105 Query: 169 ggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggtacacg 228 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 2104 ggcaccaccgtctcgttcagagggtccttccacgcctcctcgtacagcgctgggtacaca 2045 Query: 229 tccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtcc 288 | ||| ||||||||||||||||| ||||||||||||||||| ||||||| || || || Sbjct: 2044 ttcccatcgtaccgccccagcacagaccccaggtagtggtctgtgtagttgaaggcatca 1985 Query: 289 accagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattggcc 348 |||||||| || || || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 1984 accagcgcaacagcatttggacgcacctgtgcgtaaagcttgcccagctgctcgtttgcc 1925 Query: 349 agcgcgccctgcctggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttgtgc 408 ||||| |||||| ||| |||| |||||| || | |||||||||||||||||||||||| Sbjct: 1924 agcgctccctgcttgggtgtgatgcacccggttgccaggaagtcgcccaggtgcttgtgg 1865 Query: 409 aggaggtggagcgcgtagatgctgcacagcttctgaagctgctccttcaccccagggcca 468 || | || ||| || |||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1864 agaatgtagagggcatagacattgcaaaggttctggagctgttccttcactccaggtcca 1805 Query: 469 gggatgtcctcctgcatcttc 489 || ||||||| ||||| |||| Sbjct: 1804 ggaatgtcctgctgcaccttc 1784
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 285 bits (144), Expect = 7e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 231348 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 231289 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 231288 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 231229 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 231228 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 231169 Query: 283 gcgtccaccagcgccaccgcgttaggacgcac 314 ||||||||||||||||||||||| || ||||| Sbjct: 231168 gcgtccaccagcgccaccgcgttcggccgcac 231137 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 325 agcttgccgagctgctcattggccagcgcgccctgcctggccgtgacgcaccccgtcgac 384 ||||| || |||||||| || |||||||| |||||||| || |||| || |||||||||| Sbjct: 231053 agctttcccagctgctcgtttgccagcgctccctgccttgctgtgatgctccccgtcgac 230994 Query: 385 aggaagtcgcccaggtgcttgtg 407 |||||||| ||||| |||||||| Sbjct: 230993 aggaagtcacccagatgcttgtg 230971
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 285 bits (144), Expect = 7e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 103 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 162 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 96244 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 96185 Query: 163 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 222 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 96184 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 96125 Query: 223 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 282 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 96124 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 96065 Query: 283 gcgtccaccagcgccaccgcgttaggacgcac 314 ||||||||||||||||||||||| || ||||| Sbjct: 96064 gcgtccaccagcgccaccgcgttcggccgcac 96033 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 325 agcttgccgagctgctcattggccagcgcgccctgcctggccgtgacgcaccccgtcgac 384 ||||| || |||||||| || |||||||| |||||||| || |||| || |||||||||| Sbjct: 95949 agctttcccagctgctcgtttgccagcgctccctgccttgctgtgatgctccccgtcgac 95890 Query: 385 aggaagtcgcccaggtgcttgtg 407 |||||||| ||||| |||||||| Sbjct: 95889 aggaagtcacccagatgcttgtg 95867
>emb|X84055.1|HVCDR29 H.vulgare cdr29 gene Length = 1180 Score = 161 bits (81), Expect = 3e-36 Identities = 97/101 (96%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 395 ccaggtgcttgt-gcaggaggtggagcgcgtagatgctgcacagcttctgaagctgctcc 453 |||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 665 ccaggtgcttgtaggagtaggtggagcgcgtagatgctgcacagcttctggagctgctcc 606 Query: 454 ttcaccccagggccagggatgtcctcctgcatcttctcgat 494 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 ttcaccccagggccagggatgtcctcctgcatcttctcgat 565
>ref|XM_523786.1| PREDICTED: Pan troglodytes similar to myosin, heavy polypeptide 13, skeletal muscle; extraocular muscle myosin heavy chain (LOC468397), mRNA Length = 4962 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1824 caccacagtctcgttcagggggtcctt 1798
>ref|XM_858312.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 11 (LOC489504), mRNA Length = 5888 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1827 caccacggtctcgttcagggggtcctt 1801
>ref|XM_858287.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 10 (LOC489504), mRNA Length = 5900 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1839 caccacggtctcgttcagggggtcctt 1813
>ref|XM_858261.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 9 (LOC489504), mRNA Length = 5894 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858244.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 8 (LOC489504), mRNA Length = 5888 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_846120.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 2 (LOC489504), mRNA Length = 5861 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858204.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 7 (LOC489504), mRNA Length = 5879 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858181.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 6 (LOC489504), mRNA Length = 5915 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858160.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 5 (LOC489504), mRNA Length = 5792 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858141.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 4 (LOC489504), mRNA Length = 5591 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858118.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 3 (LOC489504), mRNA Length = 5633 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1737 caccacggtctcgttcagggggtcctt 1711
>ref|XM_546623.2| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 1 (LOC489504), mRNA Length = 5882 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence Length = 198582 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 171 caccaccgtctcgttcagggggtcctt 197 |||||| |||||||||||||||||||| Sbjct: 132856 caccacagtctcgttcagggggtcctt 132882
>ref|XM_589072.2| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 13, skeletal muscle (LOC511687), partial mRNA Length = 3477 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 accaccgtctcgttcagggggtcctt 197 ||||||||||| |||||||||||||| Sbjct: 2330 accaccgtctcattcagggggtcctt 2305
>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence Length = 169842 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 tcacctctccccttgatttgat 31 |||||||||||||||||||||| Sbjct: 32288 tcacctctccccttgatttgat 32267
>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence Length = 213367 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 tcacctctccccttgatttgat 31 |||||||||||||||||||||| Sbjct: 171400 tcacctctccccttgatttgat 171379
>ref|NM_174117.1| Bos taurus myosin, heavy polypeptide 1, skeletal muscle, adult (MYH1), mRNA Length = 5987 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 accaccgtctcgttcagggggtcctt 197 ||||||||||| |||||||||||||| Sbjct: 1889 accaccgtctcattcagggggtcctt 1864
>dbj|AB059399.2| Bos taurus MyHC-2x mRNA for myosin heavy chain 2x, complete cds Length = 5987 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 accaccgtctcgttcagggggtcctt 197 ||||||||||| |||||||||||||| Sbjct: 1889 accaccgtctcattcagggggtcctt 1864
>gb|U32574.1|OCU32574 Oryctolagus cuniculus myosin heavy chain (MHC) mRNA, complete cds Length = 5988 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 accaccgtctcgttcagggggtcctt 197 ||||||||||| |||||||||||||| Sbjct: 1893 accaccgtctcattcagggggtcctt 1868
>dbj|AB025262.1| Sus scrofa mRNA for myosin heavy chain 2x, complete cds Length = 5866 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 accaccgtctcgttcagggggtcctt 197 ||||||||||| |||||||||||||| Sbjct: 1867 accaccgtctcattcagggggtcctt 1842
>dbj|AB025261.1| Sus scrofa mRNA for myosin heavy chain 2b, complete cds Length = 5929 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 accaccgtctcgttcagggggtcctt 197 ||||||||||| |||||||||||||| Sbjct: 1879 accaccgtctcattcagggggtcctt 1854
>ref|NM_129124.3| Arabidopsis thaliana ACX5 (ACYL-COA OXIDASE 5); acyl-CoA oxidase/ oxidoreductase AT2G35690 (ACX5) mRNA, complete cds Length = 2377 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 265 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 305 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 2043 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 2003
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 cgtccccgtcgtaccgcccca 247 ||||||||||||||||||||| Sbjct: 3368730 cgtccccgtcgtaccgcccca 3368750
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 gagcagcggccggaggtgctcctgg 159 |||||||||||||| |||||||||| Sbjct: 1847147 gagcagcggccggacgtgctcctgg 1847171
>gb|AY096691.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA, complete cds Length = 2026 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 265 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 305 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 1835 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 1795
>gb|AY074357.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA, complete cds Length = 2393 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 265 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 305 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 2043 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 2003
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcctcgtacagcgccgggt 223 ||||||||||||||||||||| Sbjct: 177658 cctcctcgtacagcgccgggt 177678
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 265 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 305 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 41405 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 41445
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 cgggtacacgtccccgtcgta 239 ||||||||||||||||||||| Sbjct: 4163371 cgggtacacgtccccgtcgta 4163351
>ref|XM_316059.2| Anopheles gambiae str. PEST ENSANGP00000010697 (ENSANGG00000008208), partial mRNA Length = 1452 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 tgagctgctgcttgagcagcg 142 ||||||||||||||||||||| Sbjct: 430 tgagctgctgcttgagcagcg 410
>gb|U51728.1|SCU51728 Streptomyces coelicolor phosphofructokinase ATP-PFK gene, complete cds Length = 1549 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 cctcctcgtacagcgccgggt 223 ||||||||||||||||||||| Sbjct: 1168 cctcctcgtacagcgccgggt 1148
>gb|DQ303468.1| Anopheles gambiae putative methoprene-tolerant protein mRNA, complete cds Length = 4782 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 tgagctgctgcttgagcagcg 142 ||||||||||||||||||||| Sbjct: 1243 tgagctgctgcttgagcagcg 1223
>gb|AC152118.1| Pichia stipitis clone JGIAHYZ-5A12, complete sequence Length = 39014 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcttgagctgctgcttgagc 138 |||||||||||||||||||| Sbjct: 33156 gcttgagctgctgcttgagc 33137
>ref|XM_524254.1| PREDICTED: Pan troglodytes similar to ryanodine receptor 1 (skeletal); sarcoplasmic reticulum calcium release channel (LOC468868), mRNA Length = 12732 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 604 agagcttgagctgctccttgagca 581
>ref|NM_001001534.1| Sus scrofa ryanodine receptor 1 (RYR1), mRNA Length = 15378 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 235 agagcttgagctgctccttgagca 212
>ref|XM_582026.2| PREDICTED: Bos taurus similar to ryanodine receptor 1, skeletal muscle (LOC505697), mRNA Length = 9500 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 106 agagcttgagctgctccttgagca 83
>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence Length = 278583 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tccttcaccccagggccagg 470 |||||||||||||||||||| Sbjct: 227980 tccttcaccccagggccagg 227961
>ref|NM_001032642.1| Takifugu rubripes paired homeobox protein (pox1), mRNA Length = 1419 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gcttctgaagctgctccttc 456 |||||||||||||||||||| Sbjct: 420 gcttctgaagctgctccttc 401
>gb|AF000197.2| Caenorhabditis elegans cosmid T21G5, complete sequence Length = 32028 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gagcttgagctgctgcttgagcagcggc 144 ||||||||||| ||||||||||||||| Sbjct: 24368 gagcttgagcttgtgcttgagcagcggc 24395
>gb|AC126944.3| Mus musculus BAC clone RP23-19A4 from chromosome 19, complete sequence Length = 184164 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tccttcaccccagggccagg 470 |||||||||||||||||||| Sbjct: 14607 tccttcaccccagggccagg 14588
>ref|NM_000540.1| Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA Length = 15359 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 233 agagcttgagctgctccttgagca 210
>ref|XM_857510.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 50 (LOC479502), mRNA Length = 5991 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1892 gtctcgttcagggggtcctt 1873
>ref|XM_857486.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 49 (LOC479502), mRNA Length = 6002 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1903 gtctcgttcagggggtcctt 1884
>ref|XM_857459.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 48 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857436.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 47 (LOC479502), mRNA Length = 6000 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857412.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 46 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857064.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 33 (LOC479502), mRNA Length = 5772 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1838 gtctcgttcagggggtcctt 1819
>ref|XM_857038.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 32 (LOC479502), mRNA Length = 5730 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857013.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 31 (LOC479502), mRNA Length = 5712 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856986.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 30 (LOC479502), mRNA Length = 5922 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856955.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 29 (LOC479502), mRNA Length = 5232 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856893.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 27 (LOC479502), mRNA Length = 5922 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857385.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 45 (LOC479502), mRNA Length = 5889 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1790 gtctcgttcagggggtcctt 1771
>ref|XM_857359.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 44 (LOC479502), mRNA Length = 6000 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1901 gtctcgttcagggggtcctt 1882
>ref|XM_857333.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 43 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857301.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 42 (LOC479502), mRNA Length = 5994 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1895 gtctcgttcagggggtcctt 1876
>ref|XM_857273.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 41 (LOC479502), mRNA Length = 5952 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1874 gtctcgttcagggggtcctt 1855
>ref|XM_857246.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 40 (LOC479502), mRNA Length = 5844 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857166.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 37 (LOC479502), mRNA Length = 5931 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857139.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 36 (LOC479502), mRNA Length = 5979 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1880 gtctcgttcagggggtcctt 1861
>ref|XM_857116.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 35 (LOC479502), mRNA Length = 5967 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1868 gtctcgttcagggggtcctt 1849
>ref|XM_857095.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 34 (LOC479502), mRNA Length = 5949 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1865 gtctcgttcagggggtcctt 1846
>ref|XM_856308.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 7 (LOC479502), mRNA Length = 2453 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856280.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 6 (LOC479502), mRNA Length = 2223 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_845251.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 2 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gtctcgttcagggggtcctt 197 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_962597.1| PREDICTED: Tribolium castaneum similar to RNA binding motif protein 24 (LOC656042), mRNA Length = 1150 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gagcttgagctgctgcttga 136 |||||||||||||||||||| Sbjct: 1121 gagcttgagctgctgcttga 1102
>gb|AF170880.3| Streptomyces spheroides novobiocin biosynthetic gene cluster, complete sequence Length = 25617 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cgtccaccagcgccaccgcg 303 |||||||||||||||||||| Sbjct: 3431 cgtccaccagcgccaccgcg 3450
>emb|AJ292466.1|HSA292466 Homo sapiens mRNA for WDR9 protein (WDR9 gene), form B Length = 7939 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 182 gcccaggtgctggtgcaggagctggagc 209
>emb|AJ292465.1|HSA292465 Homo sapiens mRNA for WDR9 protein (WDR9 gene), form A Length = 7925 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 182 gcccaggtgctggtgcaggagctggagc 209
>emb|AJ238214.2|HSA238214 Homo sapiens mRNA originating from the Down syndrome chromosomal region-2 (21q22.3) encoding hypothetical protein Length = 12935 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 202 gcccaggtgctggtgcaggagctggagc 229
>gb|DQ397877.1| Cenarchaeum symbiosum clone C06F03, complete sequence Length = 37987 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgagagcttgagctgctgct 133 |||||||||||||||||||| Sbjct: 7530 cgagagcttgagctgctgct 7549
>gb|DQ397577.1| Cenarchaeum symbiosum clone C13E07, complete sequence Length = 38854 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgagagcttgagctgctgct 133 |||||||||||||||||||| Sbjct: 18479 cgagagcttgagctgctgct 18498
>emb|CR612626.1| full-length cDNA clone CS0DI018YG11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1176 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 588 gcccaggtgctggtgcaggagctggagc 615
>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191886 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 91866 gcccaggtgctggtgcaggagctggagc 91893
>gb|AF404404.1|AF404404 Glycine max acyl-CoA oxidase (ACX1;2) mRNA, complete cds Length = 2254 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttccacgcctcctcgtacagc 216 |||||||| ||||||||||||||| Sbjct: 2028 tccttccatgcctcctcgtacagc 2005
>dbj|AB080587.1| Homo sapiens WDR9 mRNA for WD repeat protein, WDR9-form2, complete cds Length = 7633 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 202 gcccaggtgctggtgcaggagctggagc 229
>dbj|AB080586.1| Homo sapiens WDR9 mRNA for WD repeat protein, WDR9-form1, complete cds Length = 9380 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 202 gcccaggtgctggtgcaggagctggagc 229
>gb|M91452.1|PIGRYRN Sus scrofa Yorkshire ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 235 agagcttgagctgctccttgagca 212
>gb|M91451.1|PIGRYRMH Sus scrofa Belgisch Landras/Pietrain ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 235 agagcttgagctgctccttgagca 212
>ref|NM_001026456.1| Caenorhabditis elegans STAR (RNA binding protein) family member (star-2) (star-2) mRNA, complete cds Length = 1426 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 gagcttgagctgctgcttgagcagcggc 144 ||||||||||| ||||||||||||||| Sbjct: 1295 gagcttgagcttgtgcttgagcagcggc 1268
>ref|NM_001026455.2| Caenorhabditis elegans STAR (RNA binding protein) family member (star-2) (star-2) mRNA, complete cds Length = 1356 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 gagcttgagctgctgcttgagcagcggc 144 ||||||||||| ||||||||||||||| Sbjct: 1225 gagcttgagcttgtgcttgagcagcggc 1198
>gb|BC064602.1| Homo sapiens bromodomain and WD repeat domain containing 1, transcript variant 3, mRNA (cDNA clone IMAGE:5785347), complete cds Length = 2488 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 234 gcccaggtgctggtgcaggagctggagc 261
>gb|AF263245.1|AF263245 Micromonospora megalomicea subsp. nigra megalomicin biosynthetic gene cluster, partial sequence Length = 47981 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ggccagcgcgccctgcctgg 364 |||||||||||||||||||| Sbjct: 38840 ggccagcgcgccctgcctgg 38821
>ref|NM_001007246.1| Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1), transcript variant 3, mRNA Length = 2488 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 242 gcccaggtgctggtgcaggagctggagc 269
>ref|NM_033656.2| Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1), transcript variant 2, mRNA Length = 13003 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 242 gcccaggtgctggtgcaggagctggagc 269
>ref|NM_018963.3| Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1), transcript variant 1, mRNA Length = 8670 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 gcccaggtgcttgtgcaggaggtggagc 420 ||||||||||| ||||||||| |||||| Sbjct: 242 gcccaggtgctggtgcaggagctggagc 269
>gb|AY375476.1| Equus caballus ryanodine receptor 1 mRNA, exon 2 and partial cds Length = 120 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 58 agagcttgagctgctccttgagca 35
>gb|AY071923.1| Takifugu rubripes paired homeobox protein (pox1) mRNA, complete cds Length = 1419 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gcttctgaagctgctccttc 456 |||||||||||||||||||| Sbjct: 420 gcttctgaagctgctccttc 401
>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence Length = 110569 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 27038 agagcttgagctgctccttgagca 27015
>gb|U48450.1|HUMRYR02 Human skeletal muscle ryanodine receptor gene (RYR1), exon 2 Length = 580 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 118 agagcttgagctgctccttgagca 95
>emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, complete sequence Length = 176982 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttg 135 |||||||||||||||||||| Sbjct: 156383 agagcttgagctgctgcttg 156364
>gb|J05200.1|HUMRYR Human ryanodine receptor mRNA, complete cds Length = 15346 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 208 agagcttgagctgctccttgagca 185
>emb|Z49778.1|SSCRCRYR1 S.scrofa gene for skeletal muscle ryanodine receptor Length = 28080 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 5355 agagcttgagctgctccttgagca 5332
>emb|X62880.1|SSCRCRNA S.scrofa mRNA for calcium release channel (CRC) Length = 15253 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 agagcttgagctgctgcttgagca 139 ||||||||||||||| |||||||| Sbjct: 103 agagcttgagctgctccttgagca 80 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,617,264 Number of Sequences: 3902068 Number of extensions: 3617264 Number of successful extensions: 76426 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76057 Number of HSP's gapped (non-prelim): 365 length of query: 505 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 483 effective length of database: 17,147,199,772 effective search space: 8282097489876 effective search space used: 8282097489876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)