ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21g20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit... 91 5e-33
2UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit... 87 2e-31
3UCRIA_SOLTU (Q69GY7) Cytochrome b6-f complex iron-sulfur subunit... 86 1e-30
4UCRIA_TOBAC (P30361) Cytochrome b6-f complex iron-sulfur subunit... 86 6e-30
5UCRIB_TOBAC (Q02585) Cytochrome b6-f complex iron-sulfur subunit... 84 1e-29
6UCRIA_SPIOL (P08980) Cytochrome b6-f complex iron-sulfur subunit... 82 9e-29
7UCRIA_FRIAG (O49078) Cytochrome b6-f complex iron-sulfur subunit... 79 1e-28
8UCRIA_ARATH (Q9ZR03) Cytochrome b6-f complex iron-sulfur subunit... 76 4e-27
9UCRIA_PEA (P26291) Cytochrome b6-f complex iron-sulfur subunit, ... 75 8e-26
10UCRI_MASLA (P83794) Cytochrome b6-f complex iron-sulfur subunit ... 73 5e-25
11UCRI_SYNP6 (Q5N5B0) Cytochrome b6-f complex iron-sulfur subunit ... 73 2e-24
12UCRIB_SYNY3 (P26290) Cytochrome b6-f complex iron-sulfur subunit... 67 7e-24
13UCRI_NOSSP (P14698) Cytochrome b6-f complex iron-sulfur subunit ... 71 7e-24
14UCRIA_ANAVT (Q9L3P9) Cytochrome b6-f complex iron-sulfur subunit... 70 7e-24
15UCRI_SYNP2 (P26292) Cytochrome b6-f complex iron-sulfur subunit ... 68 2e-23
16UCRI_PROMP (Q7V2L4) Cytochrome b6-f complex iron-sulfur subunit ... 73 2e-23
17UCRI_SYNEL (Q9X9T2) Cytochrome b6-f complex iron-sulfur subunit ... 68 4e-23
18UCRIA_ANASP (Q93SX0) Cytochrome b6-f complex iron-sulfur subunit... 67 6e-23
19UCRIA_CYAPA (Q5CC93) Cytochrome b6-f complex iron-sulfur subunit... 65 1e-22
20UCRI_PROMA (Q7VDC0) Cytochrome b6-f complex iron-sulfur subunit ... 70 1e-22
21UCRIA_VOLCA (Q9SBN3) Cytochrome b6-f complex iron-sulfur subunit... 64 6e-22
22UCRIA_CHLRE (P49728) Cytochrome b6-f complex iron-sulfur subunit... 64 8e-22
23UCRIB_CYAPA (Q5CC92) Cytochrome b6-f complex iron-sulfur subunit... 65 1e-21
24UCRI_PROMM (Q7V654) Cytochrome b6-f complex iron-sulfur subunit ... 62 4e-21
25UCRI_SYNPX (Q7U566) Cytochrome b6-f complex iron-sulfur subunit ... 62 2e-20
26UCRIA_CHLS6 (Q7XYM4) Cytochrome b6-f complex iron-sulfur subunit... 63 2e-20
27UCRIC_ANASP (P70758) Cytochrome b6-f complex iron-sulfur subunit... 56 3e-15
28UCRIA_SYNY3 (P74714) Cytochrome b6-f complex iron-sulfur subunit... 52 3e-14
29UCRIB_ANAVT (Q93SW6) Cytochrome b6-f complex iron-sulfur subunit... 48 6e-14
30UCRIB_ANASP (Q93SW8) Cytochrome b6-f complex iron-sulfur subunit... 48 6e-14
31UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit ... 46 5e-13
32UCRI_CHLTE (Q9F722) Cytochrome b6-f complex iron-sulfur subunit ... 39 4e-05
33UCRI_CHLLT (Q46136) Cytochrome b6-f complex iron-sulfur subunit ... 42 5e-04
34QCRA_BACSU (P46911) Menaquinol-cytochrome c reductase iron-sulfu... 39 0.004
35QCRA_BACTC (Q45657) Menaquinol-cytochrome c reductase iron-sulfu... 37 0.009
36UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur... 34 0.014
37UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur... 29 0.030
38UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur... 29 0.083
39UCRI_BRAJA (P51130) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.13
40VE2_HPV25 (P36787) Regulatory protein E2 30 0.17
41UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
42UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur s... 32 0.38
43UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
44UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
45UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
46UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
47UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
48UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
49UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
50UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
51UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
52UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
53UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
54UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.38
55SUV3_DROME (P20193) Protein suppressor of variegation 3-7 32 0.38
56UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.50
57ARSS_CENAS (Q8GGJ7) Arsenite oxidase small subunit precursor (EC... 31 0.85
58UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfu... 30 1.1
59ASP_DROME (Q9VC45) Protein abnormal spindle 30 1.1
60UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur... 30 1.1
61UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfu... 30 1.1
62UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfu... 30 1.1
63UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfu... 30 1.1
64UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur... 30 1.1
65UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfu... 30 1.1
66TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-prote... 30 1.9
67QCRA_CORGL (Q79VE8) Menaquinol-cytochrome c reductase iron-sulfu... 30 1.9
68QCRA_COREF (Q8FNR1) Probable menaquinol-cytochrome c reductase i... 30 1.9
69UCRI_RHOVI (P81380) Ubiquinol-cytochrome c reductase iron-sulfur... 30 1.9
70QCRA_CORDI (Q6NGA2) Probable menaquinol-cytochrome c reductase i... 30 1.9
71UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur... 29 2.5
72UCRI_RHOSH (Q02762) Ubiquinol-cytochrome c reductase iron-sulfur... 29 2.5
73UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur... 29 2.5
74UCRI_RHOCA (P08500) Ubiquinol-cytochrome c reductase iron-sulfur... 29 3.2
75ARSS_ALCFA (Q7SIF3) Arsenite oxidase small subunit (EC 1.20.98.1... 28 4.2
76BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3... 28 5.5
77TRIB1_MOUSE (Q8K4K4) Tribbles homolog 1 (TRB-1) 28 5.5
78ESC_DROVI (Q26458) Polycomb protein esc (Protein extra sex combs) 28 7.2
79PUR2_CORAM (Q9RHX4) Phosphoribosylamine--glycine ligase (EC 6.3.... 28 7.2
80UBE2C_MOUSE (Q9D1C1) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2... 27 9.4
81UBE2C_HUMAN (O00762) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2... 27 9.4
82UCRI_RHORU (P23136) Ubiquinol-cytochrome c reductase iron-sulfur... 27 9.4
83EDG5_RAT (P47752) Sphingosine 1-phosphate receptor Edg-5 (S1P re... 27 9.4
84VATF_HALSA (Q9HNE2) V-type ATP synthase subunit F (EC 3.6.3.14) ... 27 9.4
85Y1283_THEMA (Q9X109) UPF0078 membrane protein TM1283 27 9.4 
>UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 222

 Score = 91.3 bits (225), Expect(2) = 5e-33
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWWK 139
           KVVRGPAPLSLALVHADVDD KVVFVPWVETDFRTG+NPWWK
Sbjct: 181 KVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWWK 222



 Score = 67.8 bits (164), Expect(2) = 5e-33
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNAAENKFLCPCHGSQYNNQG+
Sbjct: 154 LGCVVPWNAAENKFLCPCHGSQYNNQGK 181
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>UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 225

 Score = 87.0 bits (214), Expect(2) = 2e-31
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           +VVRGPAPLSLALVHADVDD KV+FVPWVETDFRTG+NPWW
Sbjct: 184 RVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWW 224



 Score = 67.0 bits (162), Expect(2) = 2e-31
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNAAENKF+CPCHGSQYNNQG+
Sbjct: 157 LGCVVPWNAAENKFICPCHGSQYNNQGR 184
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>UCRIA_SOLTU (Q69GY7) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 85.5 bits (210), Expect(2) = 1e-30
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL HAD+DD KVVFVPWVETDFRTG++PWW
Sbjct: 189 KVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWW 229



 Score = 65.5 bits (158), Expect(2) = 1e-30
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN AENKF+CPCHGSQYNNQG+
Sbjct: 162 LGCVVPWNTAENKFICPCHGSQYNNQGK 189
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>UCRIA_TOBAC (P30361) Cytochrome b6-f complex iron-sulfur subunit 1, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 228

 Score = 85.5 bits (210), Expect(2) = 6e-30
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           +VVRGPAPLSLAL HAD+DD KVVFVPWVETDFRTGE+PWW
Sbjct: 187 RVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWW 227



 Score = 63.2 bits (152), Expect(2) = 6e-30
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVP+NAAENKF+CPCHGSQYNNQG+
Sbjct: 160 LGCVVPFNAAENKFICPCHGSQYNNQGR 187
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>UCRIB_TOBAC (Q02585) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 228

 Score = 84.3 bits (207), Expect(2) = 1e-29
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           +VVRGPAPLSLAL HAD+DD KVVFVPWVETDFRTGE PWW
Sbjct: 187 RVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWW 227



 Score = 63.2 bits (152), Expect(2) = 1e-29
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVP+NAAENKF+CPCHGSQYNNQG+
Sbjct: 160 LGCVVPFNAAENKFICPCHGSQYNNQGR 187
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>UCRIA_SPIOL (P08980) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 81.6 bits (200), Expect(2) = 9e-29
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           +VVRGPAPLSLAL H DVDD KVVFVPW ETDFRTGE PWW
Sbjct: 188 RVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWW 228



 Score = 63.2 bits (152), Expect(2) = 9e-29
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVP+NAAENKF+CPCHGSQYNNQG+
Sbjct: 161 LGCVVPFNAAENKFICPCHGSQYNNQGR 188
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>UCRIA_FRIAG (O49078) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 78.6 bits (192), Expect(2) = 1e-28
 Identities = 35/42 (83%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL H D+ ++ KVVFVPWVETDFRTGENPWW
Sbjct: 188 KVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWW 229



 Score = 65.9 bits (159), Expect(2) = 1e-28
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN AENKFLCPCHGSQYNNQG+
Sbjct: 161 LGCVVPWNKAENKFLCPCHGSQYNNQGK 188
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>UCRIA_ARATH (Q9ZR03) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP) (Proton gradient
           regulation protein 1)
          Length = 229

 Score = 76.3 bits (186), Expect(2) = 4e-27
 Identities = 33/42 (78%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDS-KVVFVPWVETDFRTGENPWW 142
           +VVRGPAPLSLAL HAD+D++ KV+FVPWVETDFRTG+ PWW
Sbjct: 187 RVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWW 228



 Score = 62.8 bits (151), Expect(2) = 4e-27
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN AENKFLCPCHGSQYN QG+
Sbjct: 160 LGCVVPWNKAENKFLCPCHGSQYNAQGR 187
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>UCRIA_PEA (P26291) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 75.5 bits (184), Expect(2) = 8e-26
 Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV--DDSKVVFVPWVETDFRTGENPWW 142
           +VVRGPAPLSLAL H DV  +D KVVFVPWVETDFRTG+ PWW
Sbjct: 187 RVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWW 229



 Score = 59.3 bits (142), Expect(2) = 8e-26
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVP+N AENKF+CPCHGSQYN+QG+
Sbjct: 160 LGCVVPFNQAENKFICPCHGSQYNDQGR 187
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>UCRI_MASLA (P83794) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 73.2 bits (178), Expect(2) = 5e-25
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KV+RGPAPLSLAL HA V D  +V  PW ETDFRTGE PWW
Sbjct: 138 KVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWW 178



 Score = 58.9 bits (141), Expect(2) = 5e-25
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNAAENKF CPCHGSQY+  G+
Sbjct: 111 LGCVVPWNAAENKFKCPCHGSQYDETGK 138
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>UCRI_SYNP6 (Q5N5B0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 73.2 bits (178), Expect(2) = 2e-24
 Identities = 31/41 (75%), Positives = 32/41 (78%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL H  V D KV   PW ETDFRTG+NPWW
Sbjct: 138 KVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWW 178



 Score = 57.0 bits (136), Expect(2) = 2e-24
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNA+ENKF CPCHGSQY+  G+
Sbjct: 111 LGCVVPWNASENKFKCPCHGSQYDATGK 138
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>UCRIB_SYNY3 (P26290) Cytochrome b6-f complex iron-sulfur subunit 2 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 180

 Score = 66.6 bits (161), Expect(2) = 7e-24
 Identities = 31/42 (73%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL HA V DD K+V   W ETDFRT E+PWW
Sbjct: 138 KVVRGPAPLSLALAHATVTDDDKLVLSTWTETDFRTDEDPWW 179



 Score = 61.6 bits (148), Expect(2) = 7e-24
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNA+ENKF+CPCHGSQYN +G+
Sbjct: 111 LGCVVPWNASENKFMCPCHGSQYNAEGK 138
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>UCRI_NOSSP (P14698) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 70.9 bits (172), Expect(2) = 7e-24
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL HA+  D K++  PW ETDFRTG+ PWW
Sbjct: 138 KVVRGPAPLSLALAHANTVDDKIILSPWTETDFRTGDAPWW 178



 Score = 57.4 bits (137), Expect(2) = 7e-24
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN AENKF CPCHGSQY+  G+
Sbjct: 111 LGCVVPWNVAENKFKCPCHGSQYDETGK 138
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>UCRIA_ANAVT (Q9L3P9) Cytochrome b6-f complex iron-sulfur subunit 1 (EC|
           1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 70.1 bits (170), Expect(2) = 7e-24
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAP SLAL HA  ++ K+V  PW ETDFRTGE PWW
Sbjct: 138 KVVRGPAPKSLALSHAKTENDKIVLTPWTETDFRTGEEPWW 178



 Score = 58.2 bits (139), Expect(2) = 7e-24
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNAAENKF CPCHGSQY+  G+
Sbjct: 111 LGCVVPWNAAENKFKCPCHGSQYDATGK 138
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>UCRI_SYNP2 (P26292) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 180

 Score = 68.2 bits (165), Expect(2) = 2e-23
 Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLALVHA+V +D K+ F  W ETDFRT E PWW
Sbjct: 138 KVVRGPAPLSLALVHAEVTEDDKISFTDWTETDFRTDEAPWW 179



 Score = 58.9 bits (141), Expect(2) = 2e-23
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN AENKF+CPCHGSQY+  G+
Sbjct: 111 LGCVVPWNTAENKFMCPCHGSQYDETGK 138
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>UCRI_PROMP (Q7V2L4) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 72.8 bits (177), Expect(2) = 2e-23
 Identities = 32/44 (72%), Positives = 33/44 (75%)
 Frame = -1

Query: 273 TRXKVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           T  KVVRGPAPLSLAL H DVDD  V+   W ETDFRT ENPWW
Sbjct: 134 TNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWW 177



 Score = 53.9 bits (128), Expect(2) = 2e-23
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPW++  NKF+CPCHGSQY+  G+
Sbjct: 110 LGCVVPWDSGANKFICPCHGSQYDTNGK 137
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>UCRI_SYNEL (Q9X9T2) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 180

 Score = 67.8 bits (164), Expect(2) = 4e-23
 Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLALV A V +D K+VF PW E DFRTG+ PWW
Sbjct: 138 KVVRGPAPLSLALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179



 Score = 58.2 bits (139), Expect(2) = 4e-23
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN +ENKF+CPCHGSQY++ G+
Sbjct: 111 LGCVVPWNVSENKFICPCHGSQYDSTGK 138
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>UCRIA_ANASP (Q93SX0) Cytochrome b6-f complex iron-sulfur subunit 1 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 179

 Score = 67.0 bits (162), Expect(2) = 6e-23
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAP SLAL HA  ++ K+V   W ETDFRTGE PWW
Sbjct: 138 KVVRGPAPKSLALSHAKTENDKIVLTSWTETDFRTGEEPWW 178



 Score = 58.2 bits (139), Expect(2) = 6e-23
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNAAENKF CPCHGSQY+  G+
Sbjct: 111 LGCVVPWNAAENKFKCPCHGSQYDATGK 138
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>UCRIA_CYAPA (Q5CC93) Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 239

 Score = 65.1 bits (157), Expect(2) = 1e-22
 Identities = 30/43 (69%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWWK 139
           KVVRGPAPLSLAL H  V +D  V F PW ETDFRT   PWWK
Sbjct: 197 KVVRGPAPLSLALAHVSVLEDGVVAFEPWTETDFRTNTAPWWK 239



 Score = 59.3 bits (142), Expect(2) = 1e-22
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWNA+ENKF+CPCHGSQY+  G+
Sbjct: 170 LGCVVPWNASENKFMCPCHGSQYDRTGK 197
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>UCRI_PROMA (Q7VDC0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 70.5 bits (171), Expect(2) = 1e-22
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL H D+DD  V+   W ETDFRTG+ PWW
Sbjct: 137 KVVRGPAPLSLALTHIDIDDDNVLVSQWTETDFRTGDKPWW 177



 Score = 53.9 bits (128), Expect(2) = 1e-22
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN+  NK++CPCHGSQY+  G+
Sbjct: 110 LGCVVPWNSGANKYICPCHGSQYDANGK 137
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>UCRIA_VOLCA (Q9SBN3) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 206

 Score = 63.9 bits (154), Expect(2) = 6e-22
 Identities = 30/42 (71%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL H DV +D  V F  W ETDFRTG  PWW
Sbjct: 164 KVVRGPAPLSLALAHCDVQEDGLVTFSTWSETDFRTGLEPWW 205



 Score = 57.8 bits (138), Expect(2) = 6e-22
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPW AAENKF CPCHGSQYN +G+
Sbjct: 137 LGCVVPWVAAENKFKCPCHGSQYNAEGK 164
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>UCRIA_CHLRE (P49728) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 206

 Score = 63.5 bits (153), Expect(2) = 8e-22
 Identities = 30/42 (71%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVV-FVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL H DV +S +V F  W ETDFRTG  PWW
Sbjct: 164 KVVRGPAPLSLALAHCDVAESGLVTFSTWTETDFRTGLEPWW 205



 Score = 57.8 bits (138), Expect(2) = 8e-22
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPW AAENKF CPCHGSQYN +G+
Sbjct: 137 LGCVVPWVAAENKFKCPCHGSQYNAEGK 164
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>UCRIB_CYAPA (Q5CC92) Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 241

 Score = 65.5 bits (158), Expect(2) = 1e-21
 Identities = 30/43 (69%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADV-DDSKVVFVPWVETDFRTGENPWWK 139
           KVVRGPAPLSLAL H +V +D  V F PW ETDFRT   PWWK
Sbjct: 199 KVVRGPAPLSLALAHVNVLEDGVVAFEPWTETDFRTNTAPWWK 241



 Score = 55.1 bits (131), Expect(2) = 1e-21
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN +E KF+CPCHGSQY+  G+
Sbjct: 172 LGCVVPWNQSEGKFMCPCHGSQYDRTGK 199
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>UCRI_PROMM (Q7V654) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 62.0 bits (149), Expect(2) = 4e-21
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL +  V++  V    W ETDFRTGE PWW
Sbjct: 137 KVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177



 Score = 57.0 bits (136), Expect(2) = 4e-21
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN+  NKF+CPCHGSQYN+ G+
Sbjct: 110 LGCVVPWNSGVNKFVCPCHGSQYNSTGK 137
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>UCRI_SYNPX (Q7U566) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 62.0 bits (149), Expect(2) = 2e-20
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           KVVRGPAPLSLAL +  V++  V    W ETDFRTG+ PWW
Sbjct: 137 KVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWW 177



 Score = 54.7 bits (130), Expect(2) = 2e-20
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGCVVPWN+  NKF+CPCHGSQY+  G+
Sbjct: 110 LGCVVPWNSGANKFMCPCHGSQYDATGK 137
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>UCRIA_CHLS6 (Q7XYM4) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 252

 Score = 63.2 bits (152), Expect(2) = 2e-20
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = -1

Query: 261 VVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           VVRGPAP  L L H + D+ K++  PW ETDFRTGE PWW
Sbjct: 212 VVRGPAPRPLQLAHVEDDNGKILLSPWTETDFRTGEKPWW 251



 Score = 53.1 bits (126), Expect(2) = 2e-20
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQG 266
           LGCVVPW+AA NKF CPCHGSQY   G
Sbjct: 184 LGCVVPWDAASNKFKCPCHGSQYAPDG 210
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>UCRIC_ANASP (P70758) Cytochrome b6-f complex iron-sulfur subunit 3 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 3)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 3) (ISP 3) (RISP 3)
          Length = 178

 Score = 55.8 bits (133), Expect(2) = 3e-15
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = -1

Query: 261 VVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           VVRGPAPL L +V   V D+ ++  PW ETD RTG+ PWW
Sbjct: 138 VVRGPAPLPLKIVQVAVIDNSILISPWTETDPRTGKKPWW 177



 Score = 43.1 bits (100), Expect(2) = 3e-15
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQG 266
           LGC  PWN  + +F CPCHGS+Y   G
Sbjct: 110 LGCTFPWNPLDQQFQCPCHGSRYAPDG 136
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>UCRIA_SYNY3 (P74714) Cytochrome b6-f complex iron-sulfur subunit 1 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 178

 Score = 51.6 bits (122), Expect(2) = 3e-14
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = -1

Query: 261 VVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           V RGPAPL L +V   V D ++   PW + D RTGE PWW
Sbjct: 138 VARGPAPLPLKIVQVAVVDDQIFISPWTDLDPRTGEKPWW 177



 Score = 44.3 bits (103), Expect(2) = 3e-14
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQG 266
           LGC  PWN  + +F CPCHGS+Y+  G
Sbjct: 110 LGCTFPWNGNDQEFQCPCHGSRYHPDG 136
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>UCRIB_ANAVT (Q93SW6) Cytochrome b6-f complex iron-sulfur subunit 2 (EC|
           1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 48.1 bits (113), Expect(2) = 6e-14
 Identities = 22/40 (55%), Positives = 23/40 (57%)
 Frame = -1

Query: 261 VVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           V RGPA   L LVH  V D  +    W ETD RTGE PWW
Sbjct: 138 VERGPANRPLKLVHVQVKDDYIWISSWQETDPRTGEKPWW 177



 Score = 46.6 bits (109), Expect(2) = 6e-14
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQG 266
           LGC  PWN  + +F CPCHGS+Y+ QG
Sbjct: 110 LGCTFPWNPVDQQFQCPCHGSRYDAQG 136
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>UCRIB_ANASP (Q93SW8) Cytochrome b6-f complex iron-sulfur subunit 2 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 178

 Score = 48.1 bits (113), Expect(2) = 6e-14
 Identities = 22/40 (55%), Positives = 23/40 (57%)
 Frame = -1

Query: 261 VVRGPAPLSLALVHADVDDSKVVFVPWVETDFRTGENPWW 142
           V RGPA   L LV   V D  +   PW ETD RTGE PWW
Sbjct: 138 VERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177



 Score = 46.6 bits (109), Expect(2) = 6e-14
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQG 266
           LGC  PWN  + +F CPCHGS+Y+ QG
Sbjct: 110 LGCTFPWNPVDQQFQCPCHGSRYDAQG 136
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>UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 186

 Score = 46.2 bits (108), Expect(2) = 5e-13
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
 Frame = -1

Query: 255 RGPAPLSLALVHADVDDSKVVFVPWVETDFR-----TGENPWW 142
           RGPAP  LALV A V D KV+  PW E DFR       ++P+W
Sbjct: 142 RGPAPQPLALVKATVSDDKVLIAPWTEQDFRCTDLWCNKDPYW 184



 Score = 45.4 bits (106), Expect(2) = 5e-13
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQG 266
           LGCVVPW+    +F CPCHGS YN  G
Sbjct: 112 LGCVVPWDNGAKQFKCPCHGSVYNADG 138
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>UCRI_CHLTE (Q9F722) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 180

 Score = 39.3 bits (90), Expect(2) = 4e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGC+V W+ A +   CPCHG++Y   G+
Sbjct: 126 LGCLVHWDEAADMIACPCHGAKYTQDGK 153



 Score = 25.4 bits (54), Expect(2) = 4e-05
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 276 TTRXKVVRGPAPLSLALVHADVDDSKVV 193
           T   K++ GP PL L      ++D K+V
Sbjct: 149 TQDGKIISGPQPLPLKQYKVKIEDGKIV 176
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>UCRI_CHLLT (Q46136) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 180

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQ 263
           LGC+V W  A+N++ CPCHG++Y   G+
Sbjct: 126 LGCLVNWVDADNQYFCPCHGAKYKLTGE 153
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>QCRA_BACSU (P46911) Menaquinol-cytochrome c reductase iron-sulfur subunit|
           (Rieske iron-sulfur protein)
          Length = 167

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = -3

Query: 346 LGCVVPWNAAE---NKFLCPCHGSQYNNQGQGCPWT 248
           LGC V WN+     NKF CPCH   Y   G   P T
Sbjct: 103 LGCTVNWNSDPKNPNKFFCPCHYGLYEKDGTNVPGT 138
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>QCRA_BACTC (Q45657) Menaquinol-cytochrome c reductase iron-sulfur subunit|
           (Rieske iron-sulfur protein)
          Length = 169

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = -3

Query: 346 LGCVVPWNAAENK---FLCPCHGSQYNNQGQGCPWT 248
           LGC V WN  +N    F CPCH   Y   G   P T
Sbjct: 105 LGCTVDWNTDKNNPNHFFCPCHYGLYTKDGTNVPGT 140
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>UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 177

 Score = 34.3 bits (77), Expect(2) = 0.014
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   +  E N + CPCHGSQY++ G+
Sbjct: 123 LGCVPLSHKGEYNGWFCPCHGSQYDSSGR 151



 Score = 21.6 bits (44), Expect(2) = 0.014
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -1

Query: 264 KVVRGPAPLSLAL-VHADVDDSKV 196
           +V +GPAPL+LA+  +  + D K+
Sbjct: 151 RVRKGPAPLNLAVPPYIFISDKKI 174
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>UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 228

 Score = 29.3 bits (64), Expect(2) = 0.030
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV    A +   + CPCHGS Y+  G+
Sbjct: 175 LGCVPIGEAGDYGGWFCPCHGSHYDISGR 203



 Score = 25.4 bits (54), Expect(2) = 0.030
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVV 193
           ++ RGPAPL+LA+     + SK++
Sbjct: 203 RIRRGPAPLNLAIPAYTFEGSKII 226
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>UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 215

 Score = 29.3 bits (64), Expect(2) = 0.083
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV    A +   + CPCHGS Y+  G+
Sbjct: 162 LGCVPIGEAGDFGGWFCPCHGSHYDISGR 190



 Score = 23.9 bits (50), Expect(2) = 0.083
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 264 KVVRGPAPLSLALVHADVDDSKVV 193
           ++ +GPAPL+L +   + D  KV+
Sbjct: 190 RIRKGPAPLNLEIPAYEFDGDKVI 213
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>UCRI_BRAJA (P51130) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 176

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCV-VPWNAAENKFLCPCHGSQYNNQGQ 263
           LGC+ +      + F CPCHGSQY++ G+
Sbjct: 122 LGCIPIAHEGNYDGFFCPCHGSQYDSSGR 150
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>VE2_HPV25 (P36787) Regulatory protein E2|
          Length = 502

 Score = 30.0 bits (66), Expect(2) = 0.17
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 236 RWPSFTPTSTTARSSSCHGWRPTSGPARTRGGNKRHKLRQ 117
           R PS T ++T+ RS        +S   R RGG +RH+L +
Sbjct: 331 RSPSTTSSATSQRSQRSRSRAGSSRGGRGRGGRRRHRLSE 370



 Score = 21.9 bits (45), Expect(2) = 0.17
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 327 GTPPRTSSSALAMDPSTTT 271
           G+P  T+S   A  PSTT+
Sbjct: 319 GSPTTTTSDRAARSPSTTS 337
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>UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) (Liver regeneration-related
           protein LRRGT00195)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) [Contains:
           Ubiquinol-cytochrome c reductase 8 kDa protein (Complex
           III subunit IX)]
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDASGR 248
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>SUV3_DROME (P20193) Protein suppressor of variegation 3-7|
          Length = 1250

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -1

Query: 324  TPPRTSSSALAMDPSTTTRXKVVRGPAPLSLALVHADVD-DSKVVFVPWVETDFRTGEN 151
            TP   + SA +  PS+TT   V   PAP+S  L   D D  S VV  P    ++  G+N
Sbjct: 1034 TPTPATVSASSKWPSSTTVTPVKTPPAPISAPLASVDADLHSSVVTTP---HEYNNGQN 1089
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>UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV   NA +   + CPCHGS Y+  G+
Sbjct: 220 LGCVPIANAGDFGGYYCPCHGSHYDVSGR 248
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>ARSS_CENAS (Q8GGJ7) Arsenite oxidase small subunit precursor (EC 1.20.98.1)|
          Length = 173

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQY--NNQGQ 263
           +GC V ++A+   F CPCH S +  +N GQ
Sbjct: 103 MGCPVSYDASAKTFKCPCHFSVFDPDNHGQ 132
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>UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfur subunit 1,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 1) (RISP1) (Fragment)
          Length = 258

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 204 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 232
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>ASP_DROME (Q9VC45) Protein abnormal spindle|
          Length = 1954

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 227 SFTPTSTTARSSSCHGWRPTSGPARTRGGNKRHKLRQQSSLV*YVKPPASPK 72
           S  P + +ARSSS H W            +K+ KL Q  SL   +K PA+P+
Sbjct: 529 SAAPANASARSSSAHAW--------PHAQSKKFKLAQTMSL---MKKPATPR 569
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>UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 273

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 219 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 247
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>UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 2) (RISP2)
          Length = 272

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 218 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 246
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>UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 5) (RISP5)
          Length = 268

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 214 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 242
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>UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfur subunit 3,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 3) (RISP3)
          Length = 268

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 214 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 242
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>UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 211 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 239
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>UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfur subunit 4,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 4) (RISP4)
          Length = 236

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   NA +   + CPCHGS Y+  G+
Sbjct: 182 LGCIPLPNAGDFGGWFCPCHGSHYDISGR 210
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>TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-protein-coupled|
           receptor induced protein 2) (GIG-2)
          Length = 372

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 121 RSLCRLFPPRVLAGPEVGLHPWHEDDL 201
           RSL R  P   L  PE+ LHPW E  L
Sbjct: 316 RSLLRREPSERLTAPEILLHPWFESVL 342
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>QCRA_CORGL (Q79VE8) Menaquinol-cytochrome c reductase iron-sulfur subunit|
           (Rieske iron-sulfur protein) (Cytochrome bc1 complex
           Rieske iron-sulfur protein)
          Length = 408

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 LGCVVP-WNAAENKFLCPCHGSQYNNQGQGCP 254
           +GC    + A  N+ LCPCH SQ++    G P
Sbjct: 336 IGCPTSLYEAQTNRILCPCHQSQFDALHYGKP 367
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>QCRA_COREF (Q8FNR1) Probable menaquinol-cytochrome c reductase iron-sulfur|
           subunit (Rieske iron-sulfur protein) (Cytochrome bc1
           complex Rieske iron-sulfur protein)
          Length = 408

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 LGCVVP-WNAAENKFLCPCHGSQYNNQGQGCP 254
           +GC    + A  N+ LCPCH SQ++    G P
Sbjct: 336 IGCPTSLYEAQTNRILCPCHQSQFDALHYGKP 367
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>UCRI_RHOVI (P81380) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 179

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGC+   +  +   + CPCHGSQY+  G+
Sbjct: 121 LGCIPLGHQGDWGGWFCPCHGSQYDASGR 149
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>QCRA_CORDI (Q6NGA2) Probable menaquinol-cytochrome c reductase iron-sulfur|
           subunit (Rieske iron-sulfur protein) (Cytochrome bc1
           complex Rieske iron-sulfur protein)
          Length = 406

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 346 LGCVVP-WNAAENKFLCPCHGSQYNNQGQGCP 254
           +GC    + A  N+ LCPCH SQ++    G P
Sbjct: 334 IGCPTSLYEAQTNRILCPCHQSQFDALHYGKP 365
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>UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 346 LGCVVPWNAAEN--KFLCPCHGSQYNNQGQ 263
           LGCV   + A +   + CPCHGS Y+  G+
Sbjct: 135 LGCVPIGDGAGDFGGWFCPCHGSHYDTSGR 164
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>UCRI_RHOSH (Q02762) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 187

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -3

Query: 346 LGCVVPWNAAENKF---LCPCHGSQYNNQGQ 263
           LGCV P       F    CPCHGS Y++ G+
Sbjct: 132 LGCV-PIGGVSGDFGGWFCPCHGSHYDSAGR 161
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>UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 231

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 346 LGCVVPWNAAE-NKFLCPCHGSQYNNQGQ 263
           LGCV    A +   + CPCHGS Y+  G+
Sbjct: 177 LGCVPIGEAGDYGGWFCPCHGSHYDISGR 205
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>UCRI_RHOCA (P08500) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 191

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -3

Query: 346 LGCVVPWNAAENKF---LCPCHGSQYNNQGQ 263
           LGCV P       F    CPCHGS Y++ G+
Sbjct: 136 LGCV-PMGDKSGDFGGWFCPCHGSHYDSAGR 165
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>ARSS_ALCFA (Q7SIF3) Arsenite oxidase small subunit (EC 1.20.98.1) (AOII)|
          Length = 133

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -3

Query: 346 LGCVVPWNAAENKFLCPCHGSQYNNQGQG 260
           +GC   ++++   F CPCH ++++ +  G
Sbjct: 63  MGCPTSYDSSSKTFSCPCHFTEFDAEKAG 91
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>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 22/81 (27%), Positives = 31/81 (38%)
 Frame = -3

Query: 340  CVVPWNAAENKFLCPCHGSQYNNQGQGCPWTCTSVAGPXXXXXXXXXXXXRAMGGDRLQD 161
            C VP  A E   +C       N +G  CP    +V                  GG++L +
Sbjct: 3226 CAVPKMAEEKPHVC---SDLRNKEGHHCPLNPQAVG--EAEVEPFSVHIAALPGGEKLGE 3280

Query: 160  RREPVVEISDTSSGSKAHSCD 98
                  E S+++SGSK  S D
Sbjct: 3281 LCSEPPEHSESTSGSKERSSD 3301
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>TRIB1_MOUSE (Q8K4K4) Tribbles homolog 1 (TRB-1)|
          Length = 372

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 121 RSLCRLFPPRVLAGPEVGLHPWHE 192
           RSL R  P   L  P++ LHPW E
Sbjct: 316 RSLLRREPSERLTAPQILLHPWFE 339
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>ESC_DROVI (Q26458) Polycomb protein esc (Protein extra sex combs)|
          Length = 425

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 227 SFTPTSTTARSSSCHGWRPTSGPARTRGGNKRHKLRQQS 111
           SFT  STT+RS S     P S     R G + HK + +S
Sbjct: 25  SFTTNSTTSRSKS-----PASSTRSKRRGRRSHKSKPKS 58
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>PUR2_CORAM (Q9RHX4) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 426

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = -1

Query: 297 LAMDPSTTTRXKVVRGPAPLSLALVHAD 214
           LA DP+TT        PA  SLA VHAD
Sbjct: 19  LAADPATTDLHVAPGSPAFASLATVHAD 46
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>UBE2C_MOUSE (Q9D1C1) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2.19)|
           (Ubiquitin-protein ligase C) (Ubiquitin carrier protein
           C) (UbcH10)
          Length = 179

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 331 PWNAAENKFLCPCHGSQYNNQGQGC 257
           P+NA   KFL PC+    + QG  C
Sbjct: 90  PYNAPTVKFLTPCYHPNVDTQGNIC 114
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>UBE2C_HUMAN (O00762) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2.19)|
           (Ubiquitin-protein ligase C) (Ubiquitin carrier protein
           C) (UbcH10)
          Length = 179

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 331 PWNAAENKFLCPCHGSQYNNQGQGC 257
           P+NA   KFL PC+    + QG  C
Sbjct: 90  PYNAPTVKFLTPCYHPNVDTQGNIC 114
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>UCRI_RHORU (P23136) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 182

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 307 FLCPCHGSQYNNQGQ 263
           + CPCHGS Y++ G+
Sbjct: 142 WFCPCHGSHYDSAGR 156
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>EDG5_RAT (P47752) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor|
           Edg-5) (G-protein coupled receptor H218) (AGR16)
           (Endothelial differentiation G-protein coupled receptor
           5) (Sphingosine 1-phosphate receptor 2) (S1P2)
          Length = 352

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = -2

Query: 179 WRPTSGPARTRGGNKRHK---LRQQSSLV*YVKPPASP 75
           WR   G    RGGN  H+   LR  SSL   +  P SP
Sbjct: 306 WRQGKGATGRRGGNPGHRLLPLRSSSSLERGLHMPTSP 343
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>VATF_HALSA (Q9HNE2) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase|
           subunit F)
          Length = 120

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +1

Query: 151 VLAGPEVGLHPWHEDDLAVVDVGVNEGQRQRCRSTDNLXPGCCTGIHG 294
           VLA  +VG+   H+DDLA +  GV +        T     G  +G  G
Sbjct: 44  VLADEDVGIAVMHDDDLAHLSRGVRQSVEASVEPTFVTIGGGASGASG 91
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>Y1283_THEMA (Q9X109) UPF0078 membrane protein TM1283|
          Length = 203

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 80  WQEA*HITRVSFAAGACVAYFHHGFSPVLK 169
           W E+ H+ R   A  A      H FSP LK
Sbjct: 72  WNESFHVNRYVIAFAALSGILGHAFSPFLK 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,163,306
Number of Sequences: 219361
Number of extensions: 894525
Number of successful extensions: 3144
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 3020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3133
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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