| Clone Name | rbaal20p18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | APT_CLOPE (Q8XJ22) Adenine phosphoribosyltransferase (EC 2.4.2.7... | 28 | 6.5 | 2 | OSKA_DROVI (Q24741) Maternal effect protein oskar | 28 | 8.6 |
|---|
>APT_CLOPE (Q8XJ22) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 172 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = +3 Query: 66 RLALTCKIYXSGKTCSTAASISNEVVGQARARALEVELTELTCRER 203 R+A+ + +G T + A + + G+ A +ELTEL R++ Sbjct: 113 RVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDK 158
>OSKA_DROVI (Q24741) Maternal effect protein oskar| Length = 594 Score = 27.7 bits (60), Expect = 8.6 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 Query: 63 SRLALTCKIYXSGKTCSTAASISNEVVGQARARALEVELTELT 191 +R+ L C+ K + IS + + AR R VEL E+T Sbjct: 422 ARMELKCRFKKFEKVLQSGLCISGQTINAARQRLRLVELPEMT 464 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.121 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,161,999 Number of Sequences: 219361 Number of extensions: 315397 Number of successful extensions: 559 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 559 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)