>GID7_YEAST (P25569) Glucose-induced degradation protein 7|
          Length = 759

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = -1

Query: 589 ISHASYSCNSQLVFAAFTDGNVAIFDADNLRLRCRIASS-AYMSTAAINSNPPIYPF--V 419
           I  + ++  ++LV +   DG + I+D    R+R  + S  +  ST   NS  P+     V
Sbjct: 676 IIRSCFAYGNKLVMSGSEDGKIYIWD----RIRGNLVSVLSGHSTVMSNSTKPMGKNCNV 731

Query: 418 VAAHPQEPNQFAVGLSDGSVKV 353
           VA++P +   FA G  DG +K+
Sbjct: 732 VASNPADKEMFASGGDDGKIKI 753

>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2|
          Length = 1514

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/66 (33%), Positives = 27/66 (40%)
 Frame = -1

Query: 436 PIYPFVVAAHPQEPNQFAVGLSDGSVKVMEPLESDGKWGTPAPVENGVANGRVPASSATS 257
           PI PFV   H   P Q A   +  S+  +  L    +   PAP+    A G  PA S   
Sbjct: 688 PIQPFVFQHH--FPKQLAKARALHSLSQLYSLSGCSRAQQPAPLVISTAQGPAPAPSGEP 745

Query: 256 NPATDQ 239
            P T Q
Sbjct: 746 QPFTSQ 751

>S26A3_RAT (Q924C9) Chloride anion exchanger (DRA protein) (Down-regulated in|
           adenoma) (Solute carrier family 26 member 3)
          Length = 757

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461 YGSHKQQSTHLPFCCRCTSPRTKSI 387
           YG HK    HL  CC C+S + K I
Sbjct: 29  YGHHKTFLDHLKGCCSCSSQKAKKI 53

>RIG_DROME (Q86BY9) Protein rigor mortis|
          Length = 1235

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = -1

Query: 589 ISHASY-SCNSQLVFAAFTDGNVAIFDADNLRLRCRIASSAYMSTAAINSNPPIYPFVVA 413
           IS  SY S     +F    DG + I + D+   +   + S ++  +A+ +    Y   +A
Sbjct: 695 ISRPSYLSIRDSFLFVGTDDGLLQIHERDSGMEK---SWSPFIRQSALFAR---YVTDIA 748

Query: 412 AHPQEPNQFAVGLSDGSVKVMEPLESDGKWGT 317
             P + N+FAV  +D SV VME   ++  W T
Sbjct: 749 WCPLDSNKFAVSGNDRSVYVMEFQPTERNWKT 780

>VE2_HPV25 (P36787) Regulatory protein E2|
          Length = 502

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
 Frame = -2

Query: 447 TAIHPFTLLLSLHIPKNQINSQSGCQMDLLK*WSRWSPTGSGERLLQWKMGW------PT 286
           T   P T       P  Q +S +  +       SR SPTGSGER  Q           P+
Sbjct: 193 TVFTPVTSSTPPESPGGQADSNTSSKTPTTDTASRLSPTGSGERSQQTSTKGRRYERRPS 252

Query: 285 AGCQHHQLQAIQPQIKTKDR 226
           +  +  Q QA Q + ++K R
Sbjct: 253 SRTRRQQAQARQRRSRSKSR 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,177,183
Number of Sequences: 219361
Number of extensions: 1856493
Number of successful extensions: 4892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4891
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)