>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 95.1 bits (235), Expect = 5e-20
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -1

Query: 170 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 45
           GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 423 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 75.5 bits (184), Expect = 4e-14
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = -1

Query: 170 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 45
           G+FYGKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 433 GTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -1

Query: 170 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 51
           G+F+GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 431 GTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 31/44 (70%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
 Frame = -1

Query: 170 GSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 45
           G+FYG  A Q  G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 433 GTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial|
           protein
          Length = 442

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 19/35 (54%), Positives = 20/35 (57%)
 Frame = -3

Query: 168 FLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 64
           FL R RS  R  AR     R K Q LRPNG E+RR
Sbjct: 140 FLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 62   CRRRSLPLGRSSWHFGRCNLP 124
            CRR   P GR   H GRCN P
Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCP 2134

>YKB4_YEAST (P34241) Hypothetical 203.3 kDa protein in PUT3-ARC19 intergenic|
            region
          Length = 1764

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 128  VPEGCTDQNAKNYDPTARSD 69
            VPE  TD N  NYD T R D
Sbjct: 1383 VPELYTDSNTNNYDATTRCD 1402


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,408,939
Number of Sequences: 219361
Number of extensions: 393016
Number of successful extensions: 1060
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 80,573,946
effective HSP length: 32
effective length of database: 73,554,394
effective search space used: 1765305456
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)