| Clone Name | rbaal20o16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RIOK3_MOUSE (Q9DBU3) Serine/threonine-protein kinase RIO3 (EC 2.... | 30 | 4.9 | 2 | BTUC_SALTI (Q8Z6I5) Vitamin B12 import system permease protein btuC | 30 | 8.4 | 3 | NUDH_WOLPM (P61787) Probable (di)nucleoside polyphosphate hydrol... | 30 | 8.4 |
|---|
>RIOK3_MOUSE (Q9DBU3) Serine/threonine-protein kinase RIO3 (EC 2.7.11.1) (RIO| kinase 3) Length = 519 Score = 30.4 bits (67), Expect = 4.9 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -2 Query: 420 SNNILKGADFSSCHLEQQVRVTTTKRLSTELLH*SVHGRY*LLWQPGSLWLLGVS 256 SN +K A + + HL QQ+ T L+H + Y +LW G +WL+ VS Sbjct: 378 SNEEMKDAYYQTLHLMQQLYNECT------LVHADL-SEYNMLWHAGKVWLIDVS 425
>BTUC_SALTI (Q8Z6I5) Vitamin B12 import system permease protein btuC| Length = 326 Score = 29.6 bits (65), Expect = 8.4 Identities = 22/74 (29%), Positives = 32/74 (43%) Frame = +2 Query: 344 LFVVVTLTCCSK*QELKSAPFNMLLLPSKRRNYSGKKFRLRRKNLIVTRGWLGCMLIALV 523 L V+ CC +S P NML L G L R L++ GW+ + +A+ Sbjct: 197 LIPVLIWICC------QSQPLNMLALGETSARQLGLPLWLWRNLLVIATGWMVGVSVAMA 250 Query: 524 KADSVLLFMGSVAP 565 A + F+G V P Sbjct: 251 GA---IGFIGLVIP 261
>NUDH_WOLPM (P61787) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 162 Score = 29.6 bits (65), Expect = 8.4 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = -3 Query: 389 VPVTWNNRSGSQRQRGYLQNYCTDPYMVVTNSCG 288 +P+ WN + Q+QR +L +C + + N G Sbjct: 84 IPICWNGKYSGQKQRWFLMKFCGEDEDIDINYTG 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,011,068 Number of Sequences: 219361 Number of extensions: 2091298 Number of successful extensions: 5181 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5018 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5179 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)