>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Minus

                                                                            
Query: 216      tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
                ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 13206164 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 13206105

                                                                            
Query: 276      atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
                | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 13206104 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 13206045

                                        
Query: 336      cggtcactgctgaccacttnctca 359
                | ||||||||| ||| ||| ||||
Sbjct: 13206044 ctgtcactgctcaccccttcctca 13206021

>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
             from chromosome 3, complete sequence
          Length = 151173

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Plus

                                                                         
Query: 216   tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
             ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 20474 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 20533

                                                                         
Query: 276   atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
             | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 20534 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 20593

                                     
Query: 336   cggtcactgctgaccacttnctca 359
             | ||||||||| ||| ||| ||||
Sbjct: 20594 ctgtcactgctcaccccttcctca 20617

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Minus

                                                                            
Query: 216      tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
                ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 13202939 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 13202880

                                                                            
Query: 276      atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
                | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 13202879 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 13202820

                                        
Query: 336      cggtcactgctgaccacttnctca 359
                | ||||||||| ||| ||| ||||
Sbjct: 13202819 ctgtcactgctcaccccttcctca 13202796

>dbj|AK119231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E03, full
            insert sequence
          Length = 2028

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Minus

                                                                        
Query: 216  tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
            ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 1699 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 1640

                                                                        
Query: 276  atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
            | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 1639 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 1580

                                    
Query: 336  cggtcactgctgaccacttnctca 359
            | ||||||||| ||| ||| ||||
Sbjct: 1579 ctgtcactgctcaccccttcctca 1556

>dbj|AK105418.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A10, full
            insert sequence
          Length = 2054

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Minus

                                                                        
Query: 216  tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
            ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 1699 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 1640

                                                                        
Query: 276  atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
            | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 1639 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 1580

                                    
Query: 336  cggtcactgctgaccacttnctca 359
            | ||||||||| ||| ||| ||||
Sbjct: 1579 ctgtcactgctcaccccttcctca 1556

>dbj|AK103394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127M16, full
            insert sequence
          Length = 2045

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Minus

                                                                        
Query: 216  tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
            ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 1701 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 1642

                                                                        
Query: 276  atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
            | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 1641 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 1582

                                    
Query: 336  cggtcactgctgaccacttnctca 359
            | ||||||||| ||| ||| ||||
Sbjct: 1581 ctgtcactgctcaccccttcctca 1558

>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
              from chromosome 3, complete sequence
          Length = 149539

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 114/144 (79%)
 Strand = Plus / Plus

                                                                          
Query: 216    tctgattgctccgggagttcactatcttcaccattcctgccaaattccttctggcagggg 275
              ||||||||||||| || |||||||||||||  | |    ||||||||||| ||||| || 
Sbjct: 113677 tctgattgctccgcgacttcactatcttcattagttacaccaaattccttttggcaagga 113736

                                                                          
Query: 276    atattcatagtttgctgtgaagaaataattcctgcaatggctttaatggccgcagcagtc 335
              | ||||||    |||||||| || || ||||| || || ||||| ||||| |||||||| 
Sbjct: 113737 acattcatctgctgctgtgatgagattattcccgctatcgctttcatggcggcagcagtt 113796

                                      
Query: 336    cggtcactgctgaccacttnctca 359
              | ||||||||| ||| ||| ||||
Sbjct: 113797 ctgtcactgctcaccccttcctca 113820

>emb|AL139101.13| Human DNA sequence from clone RP3-414L4 on chromosome 6 Contains the 3'
             end of the TIAM2 gene for T-cell lymphoma invasion and
             metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)),
             the CLDN20 gene for claudin 20, the TFB1M gene for
             transcription factor B1, mitochondrial (CGI-75 protein
             homolog of yeast mitochondrial transcription factor BCGI75
             (mtTFB, CGI-75)), the 5' end of a novel gene and two CpG
             islands, complete sequence
          Length = 116256

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 277   tattcatagtttgctgtgaagaaata 302
             ||||| ||||||||||||||||||||
Sbjct: 59856 tattcttagtttgctgtgaagaaata 59881

>gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, complete sequence
          Length = 169739

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 170   tctttctcatgcaggattgctagcctttc 198
             |||||||||||||||||| | ||||||||
Sbjct: 13659 tctttctcatgcaggatttcaagcctttc 13631

>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence
          Length = 253013

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 170   tctttctcatgcaggattgctagcctttc 198
             |||||||||||||||||| | ||||||||
Sbjct: 11520 tctttctcatgcaggatttcaagcctttc 11548

>emb|AL954338.5| Human DNA sequence from clone RP11-111I7 on chromosome 1 Contains part
             of a novel gene (FLJ10986), complete sequence
          Length = 44274

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   atattcatagtttgctgtgaa 296
             |||||||||||||||||||||
Sbjct: 27020 atattcatagtttgctgtgaa 27040

>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     caaccagaaggtctgattgc 224
               ||||||||||||||||||||
Sbjct: 3055039 caaccagaaggtctgattgc 3055058


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,190,730
Number of Sequences: 3902068
Number of extensions: 3190730
Number of successful extensions: 56097
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56041
Number of HSP's gapped (non-prelim): 56
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)