ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal21d02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence Length = 166439 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcattc 146 |||||||||||||||||||||| Sbjct: 16099 aatatacattgttgattcattc 16120
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcattc 146 |||||||||||||||||||||| Sbjct: 183079 aatatacattgttgattcattc 183100
>emb|AL513131.1| Human DNA sequence from clone RP11-210H10 on chromosome 6 Contains a HSPC030 protein pseudogene and a novel gene, complete sequence Length = 108171 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 53409 aatatacattgttgattcatt 53389
>emb|AL392089.7| Human DNA sequence from clone RP11-31F19 on chromosome 9p24.1-24.3 Contains a novel gene and a CpG island, complete sequence Length = 78031 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 11276 aatatacattgttgattcatt 11296
>emb|AL121752.13|HSDJ468N4 Human DNA sequence from clone RP3-468N4 on chromosome 20 Contains part of the C20orf44 gene for chromosome 20 open reading frame 44, complete sequence Length = 68692 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 60286 aatatacattgttgattcatt 60306
>gb|AC069067.17| Homo sapiens 3 BAC RP11-454C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 17660 aatatacattgttgattcatt 17680
>emb|AL080060.1|HSM800561 Homo sapiens genomic DNA; cDNA DKFZp564H172 (from clone DKFZp564H172) Length = 1083 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 872 aatatacattgttgattcatt 892
>gb|AC036101.6| Homo sapiens chromosome 10 clone RP11-71J2, complete sequence Length = 175492 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 124566 aatatacattgttgattcatt 124586
>gb|AC090733.7| Homo sapiens chromosome 8, clone RP11-108D15, complete sequence Length = 165456 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 20059 aatatacattgttgattcatt 20079
>gb|AC068700.5| Homo sapiens chromosome 8, clone RP11-594N15, complete sequence Length = 182860 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 2317 aatatacattgttgattcatt 2297
>gb|AC019173.4|AC019173 Homo sapiens BAC clone RP11-185H6 from 4, complete sequence Length = 181117 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 147125 aatatacattgttgattcatt 147145
>gb|AC017016.5|AC017016 Homo sapiens BAC clone RP11-152H13 from 3, complete sequence Length = 180681 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 152555 aatatacattgttgattcatt 152535
>emb|BX824072.1|CNS0A5L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 tcttcgaactcacatttctgg 165 ||||||||||||||||||||| Sbjct: 457 tcttcgaactcacatttctgg 437
>gb|AC079749.5| Homo sapiens BAC clone RP11-16N13 from 4, complete sequence Length = 79691 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 36191 aatatacattgttgattcatt 36171
>gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chromosome unknown, complete sequence Length = 193316 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 185228 aatatacattgttgattcatt 185248
>gb|AC016908.5| Homo sapiens BAC clone RP11-457D4 from 2, complete sequence Length = 183515 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 37929 aatatacattgttgattcatt 37909
>gb|AC140060.3| Homo sapiens 12 BAC RP11-199A1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 51708 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 atgtagttcagtttatctacatttt 95 |||||||||||||| |||||||||| Sbjct: 18615 atgtagttcagtttttctacatttt 18591
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete sequence Length = 119311 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aatatacattgttgattcatt 145 ||||||||||||||||||||| Sbjct: 44520 aatatacattgttgattcatt 44500
>gb|BC085474.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, mRNA (cDNA clone MGC:101940 IMAGE:30538435), complete cds Length = 1851 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1466 tgtagttcagtttttctacatttt 1489
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 118780 tgtagttcagtttttctacatttt 118757
>gb|AF259074.1| Mus musculus T-cell receptor alpha locus BAC clone MBAC519 from 14D1-D2, complete sequence Length = 72831 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 14014 tgtagttcagtttttctacatttt 14037
>gb|BC062198.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, mRNA (cDNA clone MGC:70225 IMAGE:2655879), complete cds Length = 1781 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1400 tgtagttcagtttttctacatttt 1423
>ref|XM_867030.1| PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC615271), mRNA Length = 3831 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 2000 tgtagttcagtttttctacatttt 2023
>ref|NM_194247.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A3 (HNRPA3), mRNA Length = 5808 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1636 tgtagttcagtttttctacatttt 1659
>ref|NR_002726.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 (HNRPA3P1) on chromosome 10 Length = 3043 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1564 tgtagttcagtttttctacatttt 1587
>ref|NG_005584.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A3 pseudogene (LOC441026) on chromosome 4 Length = 3286 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1614 tgtagttcagtttttctacatttt 1637
>gb|AC142103.3| Mus musculus BAC clone RP24-287E15 from chromosome 17, complete sequence Length = 175787 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ctggatctcaatgtaatttg 181 |||||||||||||||||||| Sbjct: 105000 ctggatctcaatgtaatttg 104981
>ref|XR_003809.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC625595), mRNA Length = 1730 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1443 tgtagttcagtttttctacatttt 1466
>ref|XR_003017.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC629025), mRNA Length = 1870 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1521 tgtagttcagtttttctacatttt 1544
>ref|XR_002278.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC668980), mRNA Length = 2189 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1902 tgtagttcagtttttctacatttt 1925
>ref|XM_857035.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 14 (LOC608074), mRNA Length = 4029 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1572 tgtagttcagtttttctacatttt 1595
>ref|XM_857010.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 13 (LOC608074), mRNA Length = 4023 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1566 tgtagttcagtttttctacatttt 1589
>ref|XM_856983.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 12 (LOC608074), mRNA Length = 3900 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1443 tgtagttcagtttttctacatttt 1466
>ref|XM_856952.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 11 (LOC608074), mRNA Length = 3969 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1512 tgtagttcagtttttctacatttt 1535
>ref|XM_856919.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 10 (LOC608074), mRNA Length = 3680 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1223 tgtagttcagtttttctacatttt 1246
>ref|XM_856890.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 9 (LOC608074), mRNA Length = 3918 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1461 tgtagttcagtttttctacatttt 1484
>ref|XM_856861.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 8 (LOC608074), mRNA Length = 3846 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1389 tgtagttcagtttttctacatttt 1412
>ref|XM_845551.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 3 (LOC608074), mRNA Length = 3921 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1464 tgtagttcagtttttctacatttt 1487
>ref|XM_856815.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 7 (LOC608074), mRNA Length = 4187 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1730 tgtagttcagtttttctacatttt 1753
>ref|XM_856787.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 6 (LOC608074), mRNA Length = 4154 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1697 tgtagttcagtttttctacatttt 1720
>ref|XM_856701.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 4 (LOC608074), mRNA Length = 4062 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1605 tgtagttcagtttttctacatttt 1628
>ref|XM_001004762.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 2 (LOC668559), mRNA Length = 3424 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1360 tgtagttcagtttttctacatttt 1383
>ref|XM_001004764.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 3 (LOC668559), mRNA Length = 3520 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1456 tgtagttcagtttttctacatttt 1479
>ref|XM_001004760.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 1 (LOC668559), mRNA Length = 3511 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1447 tgtagttcagtttttctacatttt 1470
>ref|XM_001004765.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 4 (LOC668559), mRNA Length = 3583 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1519 tgtagttcagtttttctacatttt 1542
>ref|XM_903660.2| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 1 (LOC630401), mRNA Length = 1729 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1369 tgtagttcagtttttctacatttt 1392
>ref|XM_992648.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 7 (LOC630401), mRNA Length = 1774 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1414 tgtagttcagtttttctacatttt 1437
>ref|XM_992623.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 6 (LOC630401), mRNA Length = 1825 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1465 tgtagttcagtttttctacatttt 1488
>ref|XM_903839.2| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 5 (LOC630401), mRNA Length = 1888 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1528 tgtagttcagtttttctacatttt 1551
>ref|XM_988176.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 15 (LOC545592), mRNA Length = 2363 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1415 tgtagttcagtttttctacatttt 1438
>ref|XM_988106.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 13 (LOC545592), mRNA Length = 2393 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1445 tgtagttcagtttttctacatttt 1468
>ref|XM_988146.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 14 (LOC545592), mRNA Length = 2372 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1424 tgtagttcagtttttctacatttt 1447
>ref|XM_988244.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 16 (LOC545592), mRNA Length = 2456 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1508 tgtagttcagtttttctacatttt 1531
>ref|XM_897632.2| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 12 (LOC545592), mRNA Length = 2522 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1574 tgtagttcagtttttctacatttt 1597
>ref|XM_984956.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), mRNA Length = 1847 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1590 tgtagttcagtttttctacatttt 1613
>ref|XR_002761.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC620454), mRNA Length = 1843 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1494 tgtagttcagtttttctacatttt 1517
>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence Length = 165307 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 16064 tgtagttcagtttttctacatttt 16041
>gb|BC061894.1| Homo sapiens cDNA clone IMAGE:4426883, partial cds Length = 931 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 570 tgtagttcagtttttctacatttt 593
>gb|BC032437.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A3, mRNA (cDNA clone IMAGE:4432159), partial cds Length = 2309 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 698 tgtagttcagtttttctacatttt 721
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence Length = 144217 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aaaatatacattgttgattcattc 146 |||||||||||||| ||||||||| Sbjct: 123200 aaaatatacattgtagattcattc 123177
>gb|BC053640.1| Homo sapiens cDNA clone IMAGE:4515539, **** WARNING: chimeric clone **** Length = 2153 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 591 tgtagttcagtttttctacatttt 614
>emb|AL355989.11| Human DNA sequence from clone RP11-272J7 on chromosome 10 Contains a transcription elongation factor B (SIII) pseudogene, a novel gene, a heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) pseudogene gene and a CpG island, complete sequence Length = 161451 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 112529 tgtagttcagtttttctacatttt 112506
>emb|AL355609.9| Human DNA sequence from clone RP11-282D7 on chromosome 13 Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 106534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ctaataagcagtaaaatata 130 |||||||||||||||||||| Sbjct: 26591 ctaataagcagtaaaatata 26610
>emb|CR858270.1| Pongo pygmaeus mRNA; cDNA DKFZp469I0118 (from clone DKFZp469I0118) Length = 3126 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1501 tgtagttcagtttttctacatttt 1524
>emb|BX640640.1|HSM806687 Homo sapiens genomic DNA; cDNA DKFZp686C01110 (from clone DKFZp686C01110) Length = 9860 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 atgcacagttttaccaatcc 363 |||||||||||||||||||| Sbjct: 1540 atgcacagttttaccaatcc 1521
>ref|NG_005188.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3 pseudogene (LOC546338) on chromosome X Length = 2007 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1608 tgtagttcagtttttctacatttt 1631
>gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, complete sequence Length = 139677 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 aatatacattgttgattcat 144 |||||||||||||||||||| Sbjct: 50118 aatatacattgttgattcat 50137
>gb|AC095035.2| Homo sapiens chromosome 1 clone RP11-159J16, complete sequence Length = 173084 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 102354 tgtagttcagtttttctacatttt 102377
>dbj|AK136547.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130207D22 product:hypothetical protein, full insert sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 2072 tgtagttcagtttttctacatttt 2049
>gb|AC095049.3| Homo sapiens BAC clone RP11-263F19 from 4, complete sequence Length = 86308 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 7562 tgtagttcagtttttctacatttt 7585
>ref|NM_146130.2| Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), transcript variant b, mRNA Length = 1873 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1561 tgtagttcagtttttctacatttt 1584
>dbj|AK133860.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730458M06 product:Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3), full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1591 tgtagttcagtttttctacatttt 1614
>gb|AC091940.3| Homo sapiens chromosome 5 clone RP11-331K21, complete sequence Length = 143702 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 atgcacagttttaccaatcc 363 |||||||||||||||||||| Sbjct: 85519 atgcacagttttaccaatcc 85500
>dbj|AK169663.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005C18 product:Heterogeneous nuclear ribonucleoprotein A3 homolog [Homo sapiens], full insert sequence Length = 1872 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1575 tgtagttcagtttttctacatttt 1598
>gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome 13, complete sequence Length = 177669 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 127441 tgtagttcagtttttctacatttt 127464
>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus section 1 of 4 of the complete region Length = 404892 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 178695 tgtagttcagtttttctacatttt 178718
>gb|S63912.1| D10S102=FBRNP [human, fetal brain, mRNA, 3043 nt] Length = 3043 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1564 tgtagttcagtttttctacatttt 1587
>gb|AC027688.5| Homo sapiens chromosome 16 clone RP11-883G14, complete sequence Length = 177147 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 125 aatatacattgttgattcattcttcgaactca 156 |||||| ||||||||||||||| | ||||||| Sbjct: 34375 aatatatattgttgattcattcattgaactca 34344
>gb|AC023819.7| Homo sapiens chromosome 16 clone RP11-1102H15, complete sequence Length = 136137 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 125 aatatacattgttgattcattcttcgaactca 156 |||||| ||||||||||||||| | ||||||| Sbjct: 8419 aatatatattgttgattcattcattgaactca 8388
>dbj|AB201711.1| Mus musculus hnRNPA3 mRNA for heterogeneous nuclear ribonucleoprotein A3, complete cds Length = 1636 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1572 tgtagttcagtttttctacatttt 1595
>gb|AC079305.6| Homo sapiens BAC clone RP11-483K11 from 2, complete sequence Length = 184503 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 113886 tgtagttcagtttttctacatttt 113909
>gb|AC096657.1| Homo sapiens BAC clone RP11-25L17 from 2, complete sequence Length = 124090 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 112278 tgtagttcagtttttctacatttt 112301
>gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complete sequence Length = 165768 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 agcatgtagttcagtttatctacatttt 95 ||||||| || ||||||||||||||||| Sbjct: 40562 agcatgttgtacagtttatctacatttt 40535
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 aataagcagtaaaatataca 132 |||||||||||||||||||| Sbjct: 1963240 aataagcagtaaaatataca 1963259
>gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 14q24.3, complete sequence Length = 164275 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tacattttctgaacgcatca 107 |||||||||||||||||||| Sbjct: 131875 tacattttctgaacgcatca 131856
>gb|BC023908.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, transcript variant b, mRNA (cDNA clone MGC:36410 IMAGE:5322033), complete cds Length = 1873 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 1561 tgtagttcagtttttctacatttt 1584
>emb|BX005181.5| Mouse DNA sequence from clone RP24-364O14 on chromosome 2, complete sequence Length = 118597 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 atttaggcatctccaactcc 57 |||||||||||||||||||| Sbjct: 41951 atttaggcatctccaactcc 41970
>emb|AL772404.5| Mouse DNA sequence from clone RP23-374O4 on chromosome 2, complete sequence Length = 157345 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 14684 tgtagttcagtttttctacatttt 14707
>emb|CT009632.14| Mouse DNA sequence from clone RP23-5G10 on chromosome 16, complete sequence Length = 208600 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 200167 tgtagttcagtttttctacatttt 200144
>gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complete sequence Length = 275269 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tgtagctcccatggtgatca 23 |||||||||||||||||||| Sbjct: 100350 tgtagctcccatggtgatca 100369
>gb|AC102564.7| Mus musculus chromosome 1, clone RP23-210C12, complete sequence Length = 230474 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 145081 tgtagttcagtttttctacatttt 145104
>emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chromosome X, complete sequence Length = 143387 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 127262 tgtagttcagtttttctacatttt 127285
>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete sequence Length = 151967 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 12068 tgtagttcagtttttctacatttt 12091
>emb|AL806531.12| Mouse DNA sequence from clone RP23-188K22 on chromosome X, complete sequence Length = 70515 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tgtagttcagtttatctacatttt 95 ||||||||||||| |||||||||| Sbjct: 30082 tgtagttcagtttttctacatttt 30059 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,549,095 Number of Sequences: 3902068 Number of extensions: 3549095 Number of successful extensions: 77919 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77789 Number of HSP's gapped (non-prelim): 130 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
