ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA 198 1e-47
2gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian ... 198 1e-47
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AK121547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
5dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
6dbj|AK104073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
7dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
8dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
9dbj|AB210845.1| Lemna paucicostata LpLHY H1 mRNA for LHY homolog... 54 5e-04
10gb|BC032563.1| Homo sapiens cytoplasmic linker associated protei... 42 1.9
11gb|BC112940.1| Homo sapiens cytoplasmic linker associated protei... 42 1.9
12emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on ch... 42 1.9
13gb|AF347693.1| Homo sapiens multiple asters 1 (MAST1) mRNA, comp... 42 1.9
14emb|CR933722.1| Homo sapiens mRNA; cDNA DKFZp686H2039 (from clon... 42 1.9
15emb|CR749627.1| Homo sapiens mRNA; cDNA DKFZp686D1968 (from clon... 42 1.9
16emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca ge... 42 1.9
17emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in... 42 1.9
18ref|NM_015282.1| Homo sapiens cytoplasmic linker associated prot... 42 1.9
19dbj|AK123216.1| Homo sapiens cDNA FLJ41222 fis, clone BRAMY2029204 42 1.9
20emb|BX648933.1|HSM809084 Homo sapiens mRNA; cDNA DKFZp686A1844 (... 42 1.9
21dbj|AK074338.1| Homo sapiens cDNA FLJ23758 fis, clone HEP18066 42 1.9
22gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, co... 42 1.9
23dbj|AB014522.1| Homo sapiens mRNA for KIAA0622 protein, partial cds 42 1.9
24gb|AF499719.1| Thellungiella halophila putative selenium-binding... 40 7.5
25emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G... 40 7.5
26gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosom... 40 7.5
27emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC... 40 7.5
28gb|AC119750.2| Homo sapiens chromosome 1 clone RP11-459K23, comp... 40 7.5
29gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, compl... 40 7.5
30gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, com... 40 7.5
31emb|Y12736.2|LLCPJW565 Lactococcus lactis subsp. cremoris plasmi... 40 7.5
32gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, com... 40 7.5
33emb|BX001020.6| Mouse DNA sequence from clone RP23-167B1 on chro... 40 7.5 
>ref|XM_480189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2178

 Score =  198 bits (100), Expect = 1e-47
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                        
Query: 238  cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
            |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 2164 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 2105

                                                                        
Query: 298  ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
            | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 2104 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 2045

                                                                        
Query: 358  ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
            ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 2044 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 1985

                                                                        
Query: 418  ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
            | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 1984 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 1925

                                                                        
Query: 478  ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
            |  ||  || | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 1924 ccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 1865

                         
Query: 538  ctctactgaacag 550
            |||||||||||||
Sbjct: 1864 ctctactgaacag 1852
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>gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian oscillator component
            (COC1) mRNA, complete cds
          Length = 2608

 Score =  198 bits (100), Expect = 1e-47
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                        
Query: 238  cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
            |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 2410 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 2351

                                                                        
Query: 298  ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
            | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 2350 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 2291

                                                                        
Query: 358  ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
            ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 2290 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 2231

                                                                        
Query: 418  ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
            | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 2230 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 2171

                                                                        
Query: 478  ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
            |  ||  || | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 2170 ccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 2111

                         
Query: 538  ctctactgaacag 550
            |||||||||||||
Sbjct: 2110 ctctactgaacag 2098



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 63   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 2566 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 2508

                                                    
Query: 123  tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
            || |||| |||  ||||||||| |||||| ||||||||||
Sbjct: 2507 tggaaggtctg--aagtcctatggtagctcagatgtaaat 2470
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  198 bits (100), Expect = 1e-47
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                           
Query: 238     cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
               |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 3366758 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 3366699

                                                                           
Query: 298     ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
               | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 3366698 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 3366639

                                                                           
Query: 358     ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
               ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 3366638 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 3366579

                                                                           
Query: 418     ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
               | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 3366578 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 3366519

                                                                           
Query: 478     ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
               |  ||  || | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 3366518 ccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 3366459

                            
Query: 538     ctctactgaacag 550
               |||||||||||||
Sbjct: 3366458 ctctactgaacag 3366446



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                           
Query: 63      gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
               |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 3366914 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 3366856

                                                       
Query: 123     tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
               || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 3366855 tggaaggtctg--aagtcctatggtagctcggatgtaaat 3366818
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>dbj|AK121547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F11, full
           insert sequence
          Length = 650

 Score =  198 bits (100), Expect = 1e-47
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                       
Query: 238 cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
           |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 357 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 298

                                                                       
Query: 298 ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
           | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 297 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 238

                                                                       
Query: 358 ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
           ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 237 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 178

                                                                       
Query: 418 ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
           | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 177 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 118

                                                                       
Query: 478 ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
           |  ||  || | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 117 ccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 58

                        
Query: 538 ctctactgaacag 550
           |||||||||||||
Sbjct: 57  ctctactgaacag 45



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                       
Query: 63  gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
           |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 513 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 455

                                                   
Query: 123 tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
           || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 454 tggaaggtctg--aagtcctatggtagctcggatgtaaat 417
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0438H08
          Length = 148626

 Score =  198 bits (100), Expect = 1e-47
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                          
Query: 238    cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
              |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 144325 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 144266

                                                                          
Query: 298    ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
              | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 144265 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 144206

                                                                          
Query: 358    ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
              ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 144205 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 144146

                                                                          
Query: 418    ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
              | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 144145 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 144086

                                                                          
Query: 478    ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
              |  ||  || | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 144085 ccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 144026

                           
Query: 538    ctctactgaacag 550
              |||||||||||||
Sbjct: 144025 ctctactgaacag 144013



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                          
Query: 63     gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
              |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 144481 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 144423

                                                      
Query: 123    tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
              || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 144422 tggaaggtctg--aagtcctatggtagctcggatgtaaat 144385
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>dbj|AK104073.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C12, full
           insert sequence
          Length = 1275

 Score =  198 bits (100), Expect = 1e-47
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                       
Query: 238 cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
           |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 993 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 934

                                                                       
Query: 298 ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
           | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 933 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 874

                                                                       
Query: 358 ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
           ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 873 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 814

                                                                       
Query: 418 ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
           | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 813 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 754

                                                                       
Query: 478 ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
           |  ||  || | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 753 ccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 694

                        
Query: 538 ctctactgaacag 550
           |||||||||||||
Sbjct: 693 ctctactgaacag 681



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 63   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 1149 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 1091

                                                    
Query: 123  tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
            || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 1090 tggaaggtctg--aagtcctatggtagctcggatgtaaat 1053
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>dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N16, full
            insert sequence
          Length = 3237

 Score =  190 bits (96), Expect = 3e-45
 Identities = 258/313 (82%)
 Strand = Plus / Minus

                                                                        
Query: 238  cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
            |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 2955 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 2896

                                                                        
Query: 298  ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
            | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 2895 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 2836

                                                                        
Query: 358  ggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatggt 417
            ||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| || |
Sbjct: 2835 ggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttgat 2776

                                                                        
Query: 418  ccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctccc 477
            | ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||| 
Sbjct: 2775 caataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttcct 2716

                                                                        
Query: 478  ctctgggaaccaccttcaatncttntgcttgnggaggagaaaagctttggggaagctttc 537
            |  ||   | | ||||  || ||| | |||| |||||||||||||||||||||||| || 
Sbjct: 2715 ccttgctgatctcctttgatccttctacttgcggaggagaaaagctttggggaagccttt 2656

                         
Query: 538  ctctactgaacag 550
            |||||||||||||
Sbjct: 2655 ctctactgaacag 2643



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 63   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 3111 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 3053

                                                    
Query: 123  tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
            || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 3052 tggaaggtctg--aagtcctatggtagctcggatgtaaat 3015
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>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           PAC clone:P0498E12
          Length = 153523

 Score =  141 bits (71), Expect = 3e-30
 Identities = 134/155 (86%)
 Strand = Plus / Minus

                                                                       
Query: 238 cgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctcct 297
           |||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||||
Sbjct: 177 cgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctcct 118

                                                                       
Query: 298 ttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatattca 357
           | |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||||
Sbjct: 117 tcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagcttca 58

                                              
Query: 358 ggtgtgacaattcaatgggaaaggaagctcttggc 392
           ||| |||||||||| | ||||||||||||||||||
Sbjct: 57  ggtttgacaattcattaggaaaggaagctcttggc 23



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                       
Query: 63  gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 122
           |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 333 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 275

                                                   
Query: 123 tgcaaggactggcaagtcctatagtagcttagatgtaaat 162
           || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 274 tggaaggtctg--aagtcctatggtagctcggatgtaaat 237
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>dbj|AB210845.1| Lemna paucicostata LpLHY H1 mRNA for LHY homologue1, complete cds
          Length = 2338

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 303  tccaccgagcacctcttgtaaggtttgaagcctgt 337
            ||||||||||||||||||||||| ||||| |||||
Sbjct: 2116 tccaccgagcacctcttgtaaggcttgaatcctgt 2082
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>gb|BC032563.1| Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
           clone IMAGE:5579440), complete cds
          Length = 3746

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 457 tagtagcttcatcttgctccc 477
           |||||||||||||||||||||
Sbjct: 561 tagtagcttcatcttgctccc 541
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>gb|BC112940.1| Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
            clone MGC:131895 IMAGE:5501463), complete cds
          Length = 4974

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 4675 tagtagcttcatcttgctccc 4655
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>emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on chromosome 9 Contains the
             3' end of the FGD3 gene for FGD1 family, member 3
             (FLJ00004), a novel gene, a novel gene (MGC26847), a novel
             gene (MGC11115), the NINJ1 gene for ninjurin 1 and three
             CpG islands, complete sequence
          Length = 163689

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 363   gacaattcaatgggaaaggaa 383
             |||||||||||||||||||||
Sbjct: 87403 gacaattcaatgggaaaggaa 87383
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>gb|AF347693.1| Homo sapiens multiple asters 1 (MAST1) mRNA, complete cds
          Length = 7888

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 4707 tagtagcttcatcttgctccc 4687
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>emb|CR933722.1| Homo sapiens mRNA; cDNA DKFZp686H2039 (from clone DKFZp686H2039)
          Length = 4021

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 3752 tagtagcttcatcttgctccc 3732
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>emb|CR749627.1| Homo sapiens mRNA; cDNA DKFZp686D1968 (from clone DKFZp686D1968)
          Length = 4787

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 1612 tagtagcttcatcttgctccc 1592
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>emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca gene and putative LINE-like
             retrotransposon, cosmids C012B17 and C123B01
          Length = 64219

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 135   caagtcctatagtagcttagatgta 159
             ||||||||| |||||||||||||||
Sbjct: 15454 caagtcctacagtagcttagatgta 15478
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>emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in linkage group 1,
              complete sequence
          Length = 172983

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 77     attaacatacaacacataacaaatt 101
              ||||||||| |||||||||||||||
Sbjct: 162761 attaacatataacacataacaaatt 162785
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>ref|NM_015282.1| Homo sapiens cytoplasmic linker associated protein 1 (CLASP1), mRNA
          Length = 8089

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 4932 tagtagcttcatcttgctccc 4912
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>dbj|AK123216.1| Homo sapiens cDNA FLJ41222 fis, clone BRAMY2029204
          Length = 2326

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 2042 tagtagcttcatcttgctccc 2022
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>emb|BX648933.1|HSM809084 Homo sapiens mRNA; cDNA DKFZp686A1844 (from clone DKFZp686A1844)
          Length = 5770

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 2581 tagtagcttcatcttgctccc 2561
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>dbj|AK074338.1| Homo sapiens cDNA FLJ23758 fis, clone HEP18066
          Length = 5906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 2990 tagtagcttcatcttgctccc 2970
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>gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, complete sequence
          Length = 212628

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 369    tcaatgggaaaggaagctctt 389
              |||||||||||||||||||||
Sbjct: 175269 tcaatgggaaaggaagctctt 175289
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>dbj|AB014522.1| Homo sapiens mRNA for KIAA0622 protein, partial cds
          Length = 6951

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tagtagcttcatcttgctccc 477
            |||||||||||||||||||||
Sbjct: 3795 tagtagcttcatcttgctccc 3775
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>gb|AF499719.1| Thellungiella halophila putative selenium-binding protein mRNA,
           complete cds
          Length = 1509

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 ttttggtaccaacctcgtca 275
           ||||||||||||||||||||
Sbjct: 509 ttttggtaccaacctcgtca 528
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>emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G13 on chromosome 20 Contains the
             RPL7AL2 gene for ribosomal protein L7a like 2 (pseudogene)
             and part of a ribosomal protein S4 pseudogene, complete
             sequence
          Length = 100167

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ttgcaaggactggcaagtcc 141
             ||||||||||||||||||||
Sbjct: 24880 ttgcaaggactggcaagtcc 24899
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>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence
          Length = 242297

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    catacaacacataacaaatt 101
             ||||||||||||||||||||
Sbjct: 69968 catacaacacataacaaatt 69949
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>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2
          Length = 99814

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cattaacatacaacacataa 95
             ||||||||||||||||||||
Sbjct: 99133 cattaacatacaacacataa 99152
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>gb|AC119750.2| Homo sapiens chromosome 1 clone RP11-459K23, complete sequence
          Length = 171596

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tgtgacaattcaatgggaaa 379
             ||||||||||||||||||||
Sbjct: 76120 tgtgacaattcaatgggaaa 76101
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>gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    tgtgacaattcaatgggaaa 379
              ||||||||||||||||||||
Sbjct: 129101 tgtgacaattcaatgggaaa 129082
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>gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, complete sequence
          Length = 151601

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   taccgcaatttcttgaaaat 181
             ||||||||||||||||||||
Sbjct: 13926 taccgcaatttcttgaaaat 13907
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>emb|Y12736.2|LLCPJW565 Lactococcus lactis subsp. cremoris plasmid pJW565 DNA, LlaBIIM,
            LlaBIIR genes and orfX
          Length = 12828

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  aatttcttgaaaatacacta 187
            ||||||||||||||||||||
Sbjct: 8201 aatttcttgaaaatacacta 8182
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>gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, complete sequence
          Length = 179805

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   taccgcaatttcttgaaaat 181
             ||||||||||||||||||||
Sbjct: 87184 taccgcaatttcttgaaaat 87165
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>emb|BX001020.6| Mouse DNA sequence from clone RP23-167B1 on chromosome 4, complete
             sequence
          Length = 74555

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   tcaatgggaaaggaagctcttggc 392
             ||||||||||| ||||||||||||
Sbjct: 32964 tcaatgggaaaagaagctcttggc 32941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,151,372
Number of Sequences: 3902068
Number of extensions: 4151372
Number of successful extensions: 72522
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72430
Number of HSP's gapped (non-prelim): 92
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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