>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)|
          Length = 1159

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 449 PETKQDKSIPAEQKHRSSTTESDKENG 369
           P  KQ+KS      H+S T   DKENG
Sbjct: 228 PSAKQNKSFSGNDSHKSLTDIRDKENG 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,629,697
Number of Sequences: 219361
Number of extensions: 1538560
Number of successful extensions: 4085
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4083
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)