ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GTR4_RAT (P19357) Solute carrier family 2, facilitated glucose t... 33 0.81
2GTR4_MOUSE (P14142) Solute carrier family 2, facilitated glucose... 33 0.81
3GTR4_HUMAN (P14672) Solute carrier family 2, facilitated glucose... 32 1.4
4GTR4_BOVIN (Q27994) Solute carrier family 2, facilitated glucose... 32 1.8
5ACON_GRAVE (P49609) Aconitate hydratase, mitochondrial precursor... 30 5.3
6HYLP2_BPH45 (Q54699) Hyaluronoglucosaminidase (EC 3.2.1.35) (Hya... 29 9.0

>GTR4_RAT (P19357) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 337 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 218
           +YII  L+G  R+S + +  W D+   L  L+D   KLER
Sbjct: 230 LYIIRNLEGPARKSLKRLTGWADVSDALAELKDEKRKLER 269



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>GTR4_MOUSE (P14142) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive) (GT2)
          Length = 509

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 337 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 218
           +YII  L+G  R+S + +  W D+   L  L+D   KLER
Sbjct: 230 LYIIRNLEGPARKSLKRLTGWADVSDALAELKDEKRKLER 269



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>GTR4_HUMAN (P14672) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 337 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 218
           +YII  L+G  R+S + +  W D+   L  L+D   KLER
Sbjct: 230 LYIIQNLEGPARKSLKRLTGWADVSGVLAELKDEKRKLER 269



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>GTR4_BOVIN (Q27994) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 337 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 218
           +YII  L+G  R+S + +  W D+ + L  L++   KLER
Sbjct: 230 LYIIRNLEGPARKSLKRLTGWADVSEVLAELKEEKRKLER 269



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>ACON_GRAVE (P49609) Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3)|
           (Citrate hydro-lyase) (Aconitase)
          Length = 779

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 492 IEGADAADLVVPKPFGLPWTFCEAPKITGIRRT 590
           + GADA D++V    GLPW   +APK+ G++ T
Sbjct: 206 VGGADAVDVMV----GLPWEL-KAPKVIGVKLT 233



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>HYLP2_BPH45 (Q54699) Hyaluronoglucosaminidase (EC 3.2.1.35) (Hyaluronidase)|
          Length = 337

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 565 GASQKVQGKPKGFGTTRSAASAPSIGGDFEK 473
           G++ +++G  K  GT +     PSIG D++K
Sbjct: 210 GSAMQLRGSEKALGTLKITHENPSIGADYDK 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,443,657
Number of Sequences: 219361
Number of extensions: 1686638
Number of successful extensions: 4218
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4214
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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