ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal20m23 |
|---|---|
| Clone Library Name | barley_pub |
>SCN3A_HUMAN (Q9NY46) Sodium channel protein type 3 alpha subunit (Sodium channel| protein type III alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.3) (Sodium channel protein, brain III alpha subunit) (Voltage-gated sodium channel subtype I Length = 2000 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -3 Query: 633 EAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTP-KDAQDDSS 457 E+ E+ NTEE ++ E E+S+ K + SEG+ VD P++ + P +D + ++ Sbjct: 1109 ESDFENLNTEEFSSESELEESKEKLNATSSSEGSTVDVVLPREGEQAETEPEEDLKPEAC 1168 Query: 456 LTE 448 TE Sbjct: 1169 FTE 1171
>3F_DICDI (P13475) 3F protein precursor (Fragment)| Length = 215 Score = 35.0 bits (79), Expect = 0.20 Identities = 22/93 (23%), Positives = 44/93 (47%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPK 478 D ++ + + + +T++ + + +++ K D S ++ +PK S+PK Sbjct: 125 DAANTENAQKSPNTQSTQKGSPKSDAKEASPKTDAKEASPKSDAKEASPKTDTKQGSSPK 184 Query: 477 DAQDDSSLTEKPKSWADYSDGEVEAVQVAS*EK 379 D S T+KP S +D S + EA A+ E+ Sbjct: 185 --TDTKSSTQKPSSSSDSSKAKAEANTAANNEE 215
>SCN3A_RAT (P08104) Sodium channel protein type 3 alpha subunit (Sodium channel| protein type III alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.3) (Sodium channel protein, brain III alpha subunit) (Voltage-gated sodium channel subtype III Length = 1951 Score = 34.7 bits (78), Expect = 0.26 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -3 Query: 633 EAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTP-KDAQDDSS 457 E+ E+ NTEE ++ E E+S+ K + SEG+ VD P++ P +D + ++ Sbjct: 1060 ESDFENLNTEEFSSESELEESKEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEAC 1119 Query: 456 LTE 448 TE Sbjct: 1120 FTE 1122
>SCN2A_RAT (P04775) Sodium channel protein type 2 alpha subunit (Sodium channel| protein type II alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.2) (Sodium channel protein, brain II alpha subunit) Length = 2005 Score = 34.3 bits (77), Expect = 0.34 Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Frame = -3 Query: 633 EAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDA-QDDSS 457 E+ E+ NTEE ++ + E+S+ K + SEG+ VD AP + + P+++ + ++ Sbjct: 1111 ESDFENLNTEEFSSESDMEESKEKLNATSSSEGSTVDIGAPAEGEQPEAEPEESLEPEAC 1170 Query: 456 LTE 448 TE Sbjct: 1171 FTE 1173
>CP190_DROME (Q24478) Centrosome-associated zinc finger protein CP190 (DMAP190)| (Protein enhancer of mod(mdg4)4-1) Length = 1096 Score = 34.3 bits (77), Expect = 0.34 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = -3 Query: 639 DVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQDDS 460 D+ E+ TE + V ED V P Q + +E E+D A + A ++ + A + Sbjct: 971 DIVQSEENATTEALDRSVTDEDDLVPPTQ-VSTEQMEIDEPAAEKAAENNEDTRTADEKE 1029 Query: 459 SLTEKPKSWADYSDGEVEAVQVA 391 ++ +KP D + E ++ A Sbjct: 1030 AVEDKPNQTQDVTTAEKPTLESA 1052
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 33.5 bits (75), Expect = 0.58 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%) Frame = -3 Query: 654 TSSGVDVEAGTESNNTEEKN---------NHVECEDSEVKPDQAIVSEGAEVDATAPKDA 502 + SG D E G E N++E+++ NH + DSE + + ++ +E D K + Sbjct: 63 SDSGSDNEEGAEHNDSEDEHRPHNSSDLENH-DASDSENEESRNHIASDSEDDVRRQKGS 121 Query: 501 RDDASTPKDAQDDSSLTEKPKSWADYSD 418 + S KDA DS S +D D Sbjct: 122 DSEGSPVKDAASDSDEEPIRHSASDSED 149
>CALX_PONPY (Q5R440) Calnexin precursor| Length = 592 Score = 33.5 bits (75), Expect = 0.58 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSE-VKPDQAIVSEGAEV---DATAPKDARDDASTPKDAQDDSSL 454 E E+ + + D E VKPD A++ +AT P+ DD P+ D + Sbjct: 280 EDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDE--PEYVPDPDA- 336 Query: 453 TEKPKSWADYSDGEVEAVQVAS 388 EKP+ W + DGE EA Q+A+ Sbjct: 337 -EKPEDWDEDMDGEWEAPQIAN 357
>CALX_HUMAN (P27824) Calnexin precursor (Major histocompatibility complex class| I antigen-binding protein p88) (p90) (IP90) Length = 592 Score = 33.5 bits (75), Expect = 0.58 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSE-VKPDQAIVSEGAEV---DATAPKDARDDASTPKDAQDDSSL 454 E E+ + + D E VKPD A++ +AT P+ DD P+ D + Sbjct: 280 EDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDE--PEYVPDPDA- 336 Query: 453 TEKPKSWADYSDGEVEAVQVAS 388 EKP+ W + DGE EA Q+A+ Sbjct: 337 -EKPEDWDEDMDGEWEAPQIAN 357
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 33.5 bits (75), Expect = 0.58 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = -3 Query: 648 SGVDVEAGTESNNTEEKNNHVECEDSEVKP-DQAIVSEGAEVDATAPKDARDDAS-TPKD 475 +G +ES+++EE + E +D + KP Q V A+ PK A S + Sbjct: 118 AGKAAAKASESSSSEESSEEEEEKDKKKKPVQQKAVKPQAKAVRPPPKKAESSESESDSS 177 Query: 474 AQDDSSLTEKPKSWADYSDGEVEA 403 ++D++ T+KPK+ A + +A Sbjct: 178 SEDEAPQTQKPKAAATAAKAPTKA 201
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix| protein 3) (DMP-3) [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 934 Score = 33.5 bits (75), Expect = 0.58 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARD--DAST 484 D+ S D ++ +E + + ++H DSE K D + S+ + D++ D+ D D+S Sbjct: 514 DSDSNGDGDSESEDKDESDSSDHDNSSDSESKSDSSDSSDDSS-DSSDSSDSSDSSDSSD 572 Query: 483 PKDAQDDSSLTEKPKSWADYSD 418 D+ D S ++ S +D SD Sbjct: 573 SSDSSDSSDSSDSNSS-SDSSD 593 Score = 32.3 bits (72), Expect = 1.3 Identities = 14/67 (20%), Positives = 32/67 (47%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPK 478 D+S D ++S+++ + +N + DS+ K + S+G D+ D+++ Sbjct: 859 DSSDSSDSSDSSDSSDSSDSSNSSDSSDSDSKDSSSDSSDGDSKSGNGNSDSNSDSNSDS 918 Query: 477 DAQDDSS 457 D+ + S Sbjct: 919 DSDSEGS 925
>FKBP3_ASHGO (Q756V1) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) Length = 418 Score = 33.1 bits (74), Expect = 0.76 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = -3 Query: 657 DTSSGVDVEAGTESN-NTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTP 481 D DVEA E EE N + ++ E K + + + A KDA+ D Sbjct: 217 DMEDASDVEAKIEELVQQEEANEKRKADEDEPKAAKKQNKDQKDTKRDAKKDAKKDQKDQ 276 Query: 480 KDAQDDSSLTEKPKSWADYSDG 415 KDA+ D+ +K + D +G Sbjct: 277 KDAKKDAKKEKKVEFKKDLEEG 298
>SCN2A_HUMAN (Q99250) Sodium channel protein type 2 alpha subunit (Sodium channel| protein type II alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.2) (Sodium channel protein, brain II alpha subunit) (HBSC II) Length = 2005 Score = 33.1 bits (74), Expect = 0.76 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -3 Query: 633 EAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDA-QDDSS 457 E+ E+ NTEE ++ + E+S+ K + SEG+ VD AP + P+++ + ++ Sbjct: 1111 ESDFENLNTEEFSSESDMEESKEKLNATSSSEGSTVDIGAPAEGEQPEVEPEESLEPEAC 1170 Query: 456 LTE 448 TE Sbjct: 1171 FTE 1173
>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 687 Score = 33.1 bits (74), Expect = 0.76 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARD--DAST 484 D+ S D ++ ++ + + +NH DSE K D S ++ D++ D+ D D+S Sbjct: 511 DSDSNGDDDSESKDKDESDNSNHDNDSDSESKSD----SSDSDSDSSDSSDSSDSSDSSE 566 Query: 483 PKDAQDDSSLTEKPKSWADYSD 418 D+ D S ++ S +D SD Sbjct: 567 TSDSSDSSDTSDSSDS-SDSSD 587
>CLGN_HUMAN (O14967) Calmegin precursor| Length = 610 Score = 33.1 bits (74), Expect = 0.76 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -3 Query: 579 EDSEVKPDQAIVSEGAEV-DATAPKDARDDASTPKDAQDDSSLTEKPKSWADYSDGEVEA 403 + S VKP+ SE A++ D++ K A PK D ++ EKP W + +DGE EA Sbjct: 286 DPSAVKPEDWDESEPAQIEDSSVVKPAGWLDDEPKFIPDPNA--EKPDDWNEDTDGEWEA 343 Query: 402 VQV 394 Q+ Sbjct: 344 PQI 346
>PLS_STAAC (Q5HJU7) Putative surface protein SACOL0050 precursor| Length = 1548 Score = 32.7 bits (73), Expect = 0.99 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Frame = -3 Query: 657 DTSSGVDVEAGT-ESNNTEEKNNHVECEDSEVKPD---QAIVSEGAEVDATAPKDARDDA 490 D VDV T E +TEEK N E +E K D QA E + + T D + Sbjct: 84 DIPEQVDVTKDTTEQASTEEKANTTEQASTEEKADTTEQATTEEAPKAEGT---DKVETE 140 Query: 489 STPKDAQDDSSLTEKPKS 436 PK + D + E PK+ Sbjct: 141 EAPKAEETDKATEEAPKT 158
>TRM10_CRYNE (Q5KJW1) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31) (tRNA| methyltransferase 10) Length = 429 Score = 32.7 bits (73), Expect = 0.99 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -3 Query: 630 AGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVD 523 A TE+ E++ VEC +E + D ++ E AEVD Sbjct: 386 AKTETKRNEKEEEEVECTSAEGEEDIGVIEESAEVD 421
>ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor| Length = 253 Score = 32.7 bits (73), Expect = 0.99 Identities = 22/75 (29%), Positives = 38/75 (50%) Frame = -3 Query: 639 DVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQDDS 460 D +AG E EE H + + + + A E AE + +DA DDA + D ++DS Sbjct: 58 DEDAGGEDTGKEENTGHEDAGEEDAGEEDA-GEEDAEKEEGEKEDAGDDAGS-DDGEEDS 115 Query: 459 SLTEKPKSWADYSDG 415 + ++ ++ A+ S G Sbjct: 116 TGGDEGEANAEDSKG 130
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 32.7 bits (73), Expect = 0.99 Identities = 21/55 (38%), Positives = 26/55 (47%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDD 493 D+ GV+ G S +TEE + E E EV P A +E P DARDD Sbjct: 1336 DSCDGVEATEGPGSADTEEPKSQGEAEREEV-PRPAEQTEPPPSGTPGPDDARDD 1389
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor| Length = 678 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/87 (25%), Positives = 33/87 (37%) Frame = -3 Query: 633 EAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQDDSSL 454 E E EE+ E E+ E + + + AE D ++ DDA D +DD Sbjct: 582 EEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEE 641 Query: 453 TEKPKSWADYSDGEVEAVQVAS*EKMV 373 + D D E E + EK + Sbjct: 642 DDDEDEDEDEEDEEEEEEEEEESEKKI 668
>TAF2_YEAST (P23255) Transcription initiation factor TFIID subunit 2| (TBP-associated factor 2) (TBP-associated factor 150 kDa) (TAFII-150) (TSM-1) Length = 1407 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQDDSSLTEKP 442 E + E+++ E+ E KP + I E + D+ D S KDAQD+ E+ Sbjct: 259 EESEKEKEDTPEHDEEEEGKPARVIKDE--DKDSNLKNDEEGKNSKSKDAQDNDEEEEEG 316 Query: 441 KSWADYSDGEVE 406 +S + +GE E Sbjct: 317 ESDEEEEEGEEE 328
>REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 660 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Frame = -3 Query: 612 NTEEKNNHVECEDSEVKPDQAIVSEGAE-----VDATAPKDARDDASTPKDAQDDSSLTE 448 N EK + + D V P+Q + S+ + ++ PKD +D +TPKD+ +SL Sbjct: 400 NRMEKTSVKDMADLPV-PNQDVTSDDKQALKSTINEALPKDVSEDPATPKDS---NSLKA 455 Query: 447 KPKSWADYSDGEVE 406 +P+S YS +E Sbjct: 456 RPRS-RSYSSTSIE 468
>CALX_RAT (P35565) Calnexin precursor| Length = 591 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSE-VKPD---QAIVSEGAEVDATAPKDARDDASTPKDAQDDSSL 454 E E+ + + D + VKPD + S+ + +AT P+ DD P+ D + Sbjct: 281 EDRKPEDWDERPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGWLDDE--PEYIPDPDA- 337 Query: 453 TEKPKSWADYSDGEVEAVQVAS 388 EKP+ W + DGE EA Q+A+ Sbjct: 338 -EKPEDWDEDMDGEWEAPQIAN 358
>CALX_MOUSE (P35564) Calnexin precursor| Length = 591 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSE-VKPD---QAIVSEGAEVDATAPKDARDDASTPKDAQDDSSL 454 E E+ + + D + VKPD + S+ + +AT P+ DD P+ D + Sbjct: 281 EDRKPEDWDERPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGWLDDE--PEYIPDPDA- 337 Query: 453 TEKPKSWADYSDGEVEAVQVAS 388 EKP+ W + DGE EA Q+A+ Sbjct: 338 -EKPEDWDEDMDGEWEAPQIAN 358
>CYLC1_HUMAN (P35663) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)| Length = 651 Score = 31.6 bits (70), Expect = 2.2 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 12/99 (12%) Frame = -3 Query: 639 DVEAGTESNNTEEKNNHVECEDS----------EVKPDQAIVSEGAEVDATAPKDARDDA 490 DV+ TES + E ++ E +D+ + K D E + ++ KDAR+D+ Sbjct: 325 DVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDS 384 Query: 489 STPKDA--QDDSSLTEKPKSWADYSDGEVEAVQVAS*EK 379 K A DD K +++ S+ E+E+ + EK Sbjct: 385 RNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEK 423
>CALX_CANFA (P24643) Calnexin precursor (pp90)| Length = 593 Score = 31.6 bits (70), Expect = 2.2 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSE-VKPDQAIVSEGAEV---DATAPKDARDDASTPKDAQDDSSL 454 E E+ + + D + VKPD A++ +AT P DD P+ D + Sbjct: 281 EDQKPEDWDERPKIPDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDE--PEYVPDPDA- 337 Query: 453 TEKPKSWADYSDGEVEAVQVAS 388 EKP+ W + DGE EA Q+A+ Sbjct: 338 -EKPEDWDEDMDGEWEAPQIAN 358
>SPB1_ASPFU (Q4WVH3) AdoMet-dependent rRNA methyltransferase spb1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 795 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = -3 Query: 588 VECEDS--EVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQD 466 VE EDS E++ D +G+ ++ APK+A+ A P+D D Sbjct: 553 VEDEDSAIEMQEDDKSAKKGSALEKKAPKEAKKKAQAPEDFSD 595
>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)| Length = 348 Score = 31.2 bits (69), Expect = 2.9 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 9/97 (9%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSE----GAEVDATAPKDARD-- 496 D+ G D+E G E +K++ +D+E D A SE GA+ D KD +D Sbjct: 140 DSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKD--NKKDKKDSN 197 Query: 495 ---DASTPKDAQDDSSLTEKPKSWADYSDGEVEAVQV 394 D++T + + + + K D G+ A+++ Sbjct: 198 KGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSAIEL 234
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 31.2 bits (69), Expect = 2.9 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Frame = -3 Query: 621 ESNNTEEKNNHVECED-SEVKPDQAIVSEGAEVDATAPKDARDD-ASTPKDAQDDSSL-- 454 E E+ + + D + VKPD + D AP + D+ A P+ DD + Sbjct: 229 EDKKPEDWDERAKIPDPNAVKPD--------DWDEDAPMEIEDEEAEKPEGWLDDEPVEV 280 Query: 453 ----TEKPKSWADYSDGEVEAVQVAS 388 KP+ W D DGE EA +V++ Sbjct: 281 EDPEASKPEDWDDEEDGEWEAPKVSN 306
>MTR1B_MOUSE (Q8CIQ6) Melatonin receptor type 1B (Mel-1B-R) (Mel1b melatonin| receptor) Length = 364 Score = 30.8 bits (68), Expect = 3.7 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Frame = +1 Query: 418 VAVISPGLRLFSQA*IILSILWG*SVISSIF--------RGCCVNFSTFRNYGLIRFHFT 573 VA+I G L + + G SVI S+F R CC+ ST Y + H+ Sbjct: 99 VAIIRDGWVLGEAHCKASAFVMGLSVIGSVFNITAIAINRYCCICHST--TYHRVCSHWY 156 Query: 574 VLTFHMVVLLLRVVALSPSFNINS 645 + +V LL +VAL P+F + S Sbjct: 157 TPIYISLVWLLTLVALVPNFFVGS 180
>DICER_ARATH (Q9SP32) Endoribonuclease Dicer homolog (EC 3.1.26.-) (CARPEL| FACTORY protein) (SHORT INTEGUMENTS 1 protein) (SUSPENSOR1 protein) Length = 1909 Score = 30.4 bits (67), Expect = 4.9 Identities = 18/52 (34%), Positives = 22/52 (42%) Frame = -3 Query: 633 EAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPK 478 + E E N H E E+ E+ PD +VS G VD D TPK Sbjct: 598 KVAAEVGKPENGNAHDEMEEGEL-PDDPVVSGGEHVDEVIGAAVADGKVTPK 648
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Frame = -3 Query: 651 SSGVDVEAGTESNNTEEKNNHVECED----SEVKPDQAIVSEGA--EVDATAPKDARDDA 490 S G+D+ G E ++ N + +D KP +A + DAT+ D +D Sbjct: 60 SEGLDLWGGDEVQGVKKGNEPINVDDIIERKRGKPIRAFKDRKRKRDEDATSEDDLEEDE 119 Query: 489 STPKDAQDDSSLTEKPKSWADYSD 418 D+ DDS + S D D Sbjct: 120 EEEGDSNDDSDAAKSGDSEEDEMD 143
>BIGA_SALTY (P25927) Putative surface-exposed virulence protein bigA precursor| Length = 1953 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/81 (27%), Positives = 31/81 (38%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPK 478 D S DV +S + + +D PD + + D T P D+ DD TP Sbjct: 184 DDSGDDDVTPPDDSGDDDVTPPDDSGDDDVTPPD-----DSGDDDVTPPDDSGDDDVTPP 238 Query: 477 DAQDDSSLTEKPKSWADYSDG 415 D D T S +S+G Sbjct: 239 DDSGDDDDTPPDDSVITFSNG 259 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/74 (27%), Positives = 30/74 (40%) Frame = -3 Query: 648 SGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQ 469 SG D A + + ++ + D +V P + + D T P D+ DD TP D Sbjct: 142 SGDDDVAPPDDSGDDDVTPPDDSGDDDVTPPD----DSGDGDVTPPDDSGDDDVTPPDDS 197 Query: 468 DDSSLTEKPKSWAD 427 D +T S D Sbjct: 198 GDDDVTPPDDSGDD 211
>DMP1_RAT (P98193) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) (AG1) Length = 489 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Frame = -3 Query: 651 SSGVDVEAGTESNNT----EEKNNHVECEDS---EVKPDQAIVSEGAEVDATAPKDARDD 493 S + + +ESN + EE + EDS E Q+ E ++ + +D+R + Sbjct: 366 SQSTEEQGDSESNESLSLSEESQESAQDEDSSSQEGLQSQSASRESRSQESQSEQDSRSE 425 Query: 492 ASTPKDAQDDSSLTEKPKSWADYSDGE 412 + D+QD S E+ S S E Sbjct: 426 ENRDSDSQDSSRSKEESNSTGSTSSSE 452
>IMP4_YEAST (P53941) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 290 Score = 30.0 bits (66), Expect = 6.4 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = -3 Query: 585 ECEDSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQDDSSLTEKPKS 436 E +DS+++ + I+ + PK+ +D S KD + D SL E ++ Sbjct: 19 ELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEA 68
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 29.6 bits (65), Expect = 8.3 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Frame = -3 Query: 657 DTSSGVDVEAGTESNNTEEKNNHVECEDSEVKPD-QAIVSEGAE---VDATAPKDARDDA 490 D S+G D +A +ES+N E K + S+GAE D+T+ + D Sbjct: 469 DESNGND-DANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSN 527 Query: 489 STPKDAQDDSSLTEKPKSWADYSDGE 412 + DD+ ++ K +D SD + Sbjct: 528 GNGNNGNDDNDKSDSGKGKSDSSDSD 553
>R1AB_PEDV7 (Q91AV2) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown protein 1; 3C-like Length = 6781 Score = 29.6 bits (65), Expect = 8.3 Identities = 21/58 (36%), Positives = 29/58 (50%) Frame = -3 Query: 576 DSEVKPDQAIVSEGAEVDATAPKDARDDASTPKDAQDDSSLTEKPKSWADYSDGEVEA 403 D EV D I SEG EVD++AP+ D A++ D L P++ + EV A Sbjct: 1000 DVEVVTDAPIDSEGDEVDSSAPEKVADVANS---EPGDDGLPVAPETNVESEVEEVAA 1054
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 29.6 bits (65), Expect = 8.3 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Frame = -3 Query: 621 ESNNTEEKNNHVECEDSEV-KPDQAIVSEGAEV---DATAPKDARDDASTPKDAQDDSSL 454 + E+ + + D E KPD E+ +A P+ DD P++ D ++ Sbjct: 231 DDKKPEDWDERAKIPDPEATKPDDWDEDAPMEILDEEAEKPEGWLDDE--PEEIDDPEAV 288 Query: 453 TEKPKSWADYSDGEVEAVQV 394 KP+ W D DGE EA Q+ Sbjct: 289 --KPEDWDDEEDGEWEAPQI 306
>F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 368 Score = 29.6 bits (65), Expect = 8.3 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Frame = -3 Query: 633 EAGTESNNTEEKNN-----HVECED-SEVKPDQAIVSEGA-EVDATAPKDARDDASTPKD 475 +A +E N EEK + +++ E+ S + D I +EG E D AP++ D+ + + Sbjct: 48 KAKSEENTKEEKRDKTTEDNIKTEEPSSEESDLEIDNEGVIEADTDAPQEMGDENAEITE 107 Query: 474 AQDDSSLTEKPKSWADYSDGEVE 406 A D + +K + +DGE++ Sbjct: 108 AMMDEANEKKGAAIDALNDGELQ 130
>CLGN_MOUSE (P52194) Calmegin precursor (MEG 1 antigen) (Calnexin-T) (A2/6)| Length = 611 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Frame = -3 Query: 606 EEKNNHVECED-SEVKPDQAIVSEGAEVD---ATAPKDARDDASTPKDAQDDSSLTEKPK 439 EE ++ + D + VKP+ +E A+++ A P DD PK + + EKP+ Sbjct: 276 EEWDDRAKIPDPTAVKPEDWDENEPAQIEDSSAVKPDGWLDDE--PKFIPNPKA--EKPE 331 Query: 438 SWADYSDGEVEAVQV 394 W+D DGE EA + Sbjct: 332 DWSDDMDGEWEAPHI 346
>ABRA_PLAF7 (Q8I5D2) 101 kDa malaria antigen (p101) (Acidic basic repeat| antigen) Length = 743 Score = 29.6 bits (65), Expect = 8.3 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = -3 Query: 654 TSSGVDVEAGTESNNTEEKNNHVECEDSEVKPDQAIVSE-GAEVDATAPKDARDDASTPK 478 T+ +++ + N E + E E+ K +AI + AEVDA APK+ ++ + Sbjct: 623 TNGNKNIQQIFQQNILENDVLNQETEEEMEKQVEAITKQIEAEVDALAPKNKEEEEKEKE 682 Query: 477 DAQDDSSLTEKPKSWADYSDGEVE 406 + + EK K + + E E Sbjct: 683 KEEKEKEEKEKEKEEKEKEEKEKE 706
>INVO_SAGOE (P24712) Involucrin| Length = 493 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 7/78 (8%) Frame = +3 Query: 336 PLQYRSTTERLRRPSFLSSQPERPRLPRRCNQPR-TSAFQSSLNHLEHPLGLKRHLEHLS 512 P Q + L + S PE+ R QP+ + L HLE G +HLEH Sbjct: 215 PEQQEGQLKHLEQQEGQSELPEQQR-----GQPKYLEQEEGQLKHLEEQKGQLKHLEHEE 269 Query: 513 GLLR------QLQHLQKL 548 G L Q +HL++L Sbjct: 270 GQLELPEQVGQPKHLEQL 287
>CEMA_PSINU (Q8WI08) Chloroplast envelope membrane protein| Length = 449 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +3 Query: 375 PSFLSSQPERPRL-PRRCNQPRTSAFQSSLNHLEHPLGLKRHLEHLSGLLRQLQHLQKLW 551 P F+SS ++ L PR + TS FQ +NHL+ LKR L+ ++ L LW Sbjct: 241 PFFISSISKKWVLEPRIKDWWNTSQFQIFINHLQEKKALKR--------LQDVEEL--LW 290 Query: 552 LDQVSL 569 LD++ L Sbjct: 291 LDRIIL 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,969,351 Number of Sequences: 219361 Number of extensions: 1647028 Number of successful extensions: 5760 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5419 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5732 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
