>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +1

Query: 19  SXYSSLVEPXERDIFRNGGSCSEDFQHKFAQSQTKRIITYQVLSYSYQ 162
           S + + +E    D+    G C ED + KF +S+ ++ +  + L  SY+
Sbjct: 410 SHHQAAIEKLREDLQSEHGRCLEDLEFKFKESEKEKQLELENLQASYE 457

>VP6_BTV11 (P32933) VP6 protein (Minor inner core protein VP6)|
          Length = 325

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 41  NL*KEIYLGTEGVVPRTSNISLLNRKPKGSSHIKSCLT--RTNNHISSTQQQRDLARESV 214
           +L KE+ +  EGV  +T  +  L RK K  +H K+     R     S    QR+   E  
Sbjct: 164 SLQKELGISREGVAEQTERLRDLRRKEKNGTHAKAVERGGRKQRKESHGDAQREGVEEEK 223

Query: 215 TNYDRKRIPV 244
           T+ +  RI +
Sbjct: 224 TSEEPARIGI 233

>VP6_BTV17 (P32935) VP6 protein (Minor inner core protein VP6)|
          Length = 325

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 41  NL*KEIYLGTEGVVPRTSNISLLNRKPKGSSHIKSCLT--RTNNHISSTQQQRDLARESV 214
           +L KE+ +  EGV  +T  +  L RK K  +H K+     R     +    QR+   E  
Sbjct: 164 SLQKELGISREGVAEQTERLRDLRRKEKNGTHAKAVERGGRKQRKKTHGDAQREGVEEEK 223

Query: 215 TNYDRKRIPV 244
           T+ +  RI +
Sbjct: 224 TSEEPARIGI 233

>VP6_BTVBZ (P23066) VP6 protein (Minor inner core protein VP6)|
          Length = 329

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 41  NL*KEIYLGTEGVVPRTSNISLLNRKPKGSSHIKSCLT--RTNNHISSTQQQRDLARESV 214
           +L KE+ +  EGV  +T  +  L RK K  +H K+     R     +    QR+   E  
Sbjct: 168 SLQKELGISREGVAEQTERLRDLRRKEKNGTHAKAVERGGRKQRKKAHGDAQREGVEEEK 227

Query: 215 TNYDRKRIPV 244
           T+ +  RI +
Sbjct: 228 TSEEPARIGI 237

>MATK_GAUPR (Q95GJ0) Maturase K (Intron maturase)|
          Length = 506

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 88  DFQHKFAQSQTKRIITYQVLSYSYQQPYFFYTTAERPSTGIG 213
           D+ +K +    KR+IT+ +     Q  +FFYT    P+  +G
Sbjct: 47  DYDNKSSLLIVKRLITHLITQMYQQNHFFFYTNDFNPNKFLG 88

>VP6_BTV13 (P32934) VP6 protein (Minor inner core protein VP6)|
          Length = 325

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 41  NL*KEIYLGTEGVVPRTSNISLLNRKPKGSSHIKSCLT--RTNNHISSTQQQRDLARESV 214
           +L KE+ +  EGV  +T     L RK K  +H K+     R     S    QR+   E  
Sbjct: 164 SLQKELGISREGVAEQTERSRDLRRKEKNGTHAKAVERGGRKQRKESHGDAQREGVEEEK 223

Query: 215 TNYDRKRIPV 244
           T+ +  RI +
Sbjct: 224 TSEEPARIGI 233

>PALH_CANAL (Q59YK4) pH-response regulator protein palH/RIM21|
          Length = 529

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +2

Query: 68  TEGVVPRTSNISLLNRKPKGSSHIKSCLTRTNNHISSTQQQRDLARESVTNYDRKRI 238
           T+ VVP  S    L  +P+GSSHI   L+  N   S+T       R +V  Y RK +
Sbjct: 469 TKEVVPDFSPEMFL--QPEGSSHITETLSEQNAAPSTTNSNH--RRRNVYVYSRKEV 521

>VP6_BTV10 (P33423) VP6 protein (Minor inner core protein VP6)|
          Length = 325

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 41  NL*KEIYLGTEGVVPRTSNISLLNRKPKGSSHIKS 145
           +L KE+ +  EGV  +T  +  L RK K  +H K+
Sbjct: 164 SLQKELGISREGVAEQTERLRDLRRKEKSGAHAKA 198

>VP6_BTV1S (Q03328) VP6 protein (Minor inner core protein VP6)|
          Length = 328

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 41  NL*KEIYLGTEGVVPRTSNISLLNRKPKGSSHIKS 145
           +L KE+ +  EGV  +T  +  L RK K  +H K+
Sbjct: 168 SLQKELGISREGVAEQTERLRDLRRKEKSGAHAKA 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,796,768
Number of Sequences: 219361
Number of extensions: 623004
Number of successful extensions: 1668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)