ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21b17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
3dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
4dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
5emb|AL935122.10| Zebrafish DNA sequence from clone CH211-197C14 ... 48 0.032
6gb|AC147021.3| Pan troglodytes BAC clone RP43-85B14 from 7, comp... 46 0.12
7gb|AC006319.3| Homo sapiens PAC clone RP5-837C9 from 7, complete... 46 0.12
8gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
9gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, compl... 44 0.49
10dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
11dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
12dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
13emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in... 42 1.9
14emb|AL358875.13| Human DNA sequence from clone RP11-312H18 on ch... 42 1.9
15gb|AY936598.1| Phyllanthus gardnerianus trnK gene, partial seque... 42 1.9
16gb|AY936585.1| Phyllanthus chrysanthus trnK gene, partial sequen... 42 1.9
17gb|AC007051.3| Homo sapiens chromosome 3, clone hRPK.44_A_1, com... 42 1.9
18gb|AC007919.18| Homo sapiens 3 BAC RP11-408H1 (Roswell Park Canc... 42 1.9
19gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complet... 42 1.9
20emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in... 42 1.9
21gb|AC010072.5|AC010072 Homo sapiens chromosome 14q31 clone CTD-2... 42 1.9
22emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 i... 42 1.9
23gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 42 1.9
24emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chr... 42 1.9
25emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chr... 42 1.9
26ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 7.7
27gb|AC140370.3| Mus musculus BAC clone RP24-75N6 from chromosome ... 40 7.7
28emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in... 40 7.7
29ref|XM_643567.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.7
30ref|XM_644716.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.7
31ref|XM_648378.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.7
32ref|XM_648663.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.7
33ref|XM_660450.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.7
34gb|AY319521.1| Synthetic construct Bacteriophage SopE-Phi kanamy... 40 7.7
35emb|AL391318.21| Human DNA sequence from clone RP11-496H23 on ch... 40 7.7
36gb|AC090698.14| Homo sapiens chromosome 17, clone RP11-296K13, c... 40 7.7
37emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 i... 40 7.7
38emb|CR394534.6| Zebrafish DNA sequence from clone CH211-276A17 i... 40 7.7
39emb|CR392348.10| Zebrafish DNA sequence from clone DKEYP-51A12 i... 40 7.7
40gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, compl... 40 7.7
41gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Can... 40 7.7
42emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in... 40 7.7
43dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 7.7
44ref|XM_628123.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.7
45gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, comp... 40 7.7
46gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, comple... 40 7.7
47emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3 40 7.7
48gb|AC021713.7|AC021713 Homo sapiens chromosome , clone RP11-63D1... 40 7.7
49gb|AC010420.11| Homo sapiens chromosome 5 clone CTD-2187J20, com... 40 7.7
50gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, comple... 40 7.7
51emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in ... 40 7.7
52gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome... 40 7.7
53emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 i... 40 7.7
54emb|BX465184.7| Zebrafish DNA sequence from clone DKEY-20N10 in ... 40 7.7
55emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, c... 40 7.7
56emb|BX005067.6| Zebrafish DNA sequence from clone CH211-182K2 in... 40 7.7
57emb|AL772339.5| Zebrafish DNA sequence from clone CH211-139K23, ... 40 7.7
58gb|M79460.1|BACHYMEPR B.firmus hypothetical membrane protein and... 40 7.7
59dbj|AB026531.1| Lordiphosa pseudotenuicauda gene for alcohol deh... 40 7.7

>ref|XM_450769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3772

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 518  ctgggcttcaaactcctgcttgctcatgaatattgcaactggctcacca 566
            |||||||||||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 3412 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcacca 3364



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                                 
Query: 518      ctgggcttcaaactcctgcttgctcatgaatattgcaactggctcacca 566
                |||||||||||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 12677388 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcacca 12677436



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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                               
Query: 518    ctgggcttcaaactcctgcttgctcatgaatattgcaactggctcacca 566
              |||||||||||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 143326 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcacca 143374



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>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full
            insert sequence
          Length = 3772

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 518  ctgggcttcaaactcctgcttgctcatgaatattgcaactggctcacca 566
            |||||||||||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 3412 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcacca 3364



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>emb|AL935122.10| Zebrafish DNA sequence from clone CH211-197C14 in linkage group 6,
             complete sequence
          Length = 198363

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 139   agatactcaaatgacttggcaaaa 162
             ||||||||||||||||||||||||
Sbjct: 47931 agatactcaaatgacttggcaaaa 47954



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>gb|AC147021.3| Pan troglodytes BAC clone RP43-85B14 from 7, complete sequence
          Length = 159960

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 131  acaaaagaagatactcaaatgac 153
            |||||||||||||||||||||||
Sbjct: 4991 acaaaagaagatactcaaatgac 4969



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>gb|AC006319.3| Homo sapiens PAC clone RP5-837C9 from 7, complete sequence
          Length = 85821

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 131   acaaaagaagatactcaaatgac 153
             |||||||||||||||||||||||
Sbjct: 29899 acaaaagaagatactcaaatgac 29921



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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 537    ttgctcatgaatattgcaactggctcacca 566
              ||||||||||| ||||| ||||||||||||
Sbjct: 115528 ttgctcatgaagattgctactggctcacca 115499



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>gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, complete sequence
          Length = 179082

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 132    caaaagaagatactcaaatgac 153
              ||||||||||||||||||||||
Sbjct: 169956 caaaagaagatactcaaatgac 169977



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>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full
            insert sequence
          Length = 3673

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 537  ttgctcatgaatattgcaactggctcacca 566
            ||||||||||| ||||| ||||||||||||
Sbjct: 3402 ttgctcatgaagattgctactggctcacca 3373



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>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full
            insert sequence
          Length = 3669

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 537  ttgctcatgaatattgcaactggctcacca 566
            ||||||||||| ||||| ||||||||||||
Sbjct: 3402 ttgctcatgaagattgctactggctcacca 3373



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>dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B04, full
            insert sequence
          Length = 1434

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 537  ttgctcatgaatattgcaactggctcacca 566
            ||||||||||| ||||| ||||||||||||
Sbjct: 1182 ttgctcatgaagattgctactggctcacca 1153



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>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3,
             complete sequence
          Length = 226081

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   tgaatacaaaagaagatactc 146
             |||||||||||||||||||||
Sbjct: 16052 tgaatacaaaagaagatactc 16072



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>emb|AL358875.13| Human DNA sequence from clone RP11-312H18 on chromosome 1, complete
              sequence
          Length = 171635

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     gaataatacactgaaaagtgc 68
              |||||||||||||||||||||
Sbjct: 158476 gaataatacactgaaaagtgc 158496



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>gb|AY936598.1| Phyllanthus gardnerianus trnK gene, partial sequence; and maturase
           K (matK) gene, complete cds; chloroplast
          Length = 1835

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 aaattgaaaatgaagattgaggaat 126
           |||||||||||||| ||||||||||
Sbjct: 155 aaattgaaaatgaaaattgaggaat 179



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>gb|AY936585.1| Phyllanthus chrysanthus trnK gene, partial sequence; and maturase K
           (matK) gene, complete cds; chloroplast
          Length = 1818

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 aaattgaaaatgaagattgaggaat 126
           |||||||||||||| ||||||||||
Sbjct: 155 aaattgaaaatgaaaattgaggaat 179



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>gb|AC007051.3| Homo sapiens chromosome 3, clone hRPK.44_A_1, complete sequence
          Length = 167810

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 205   aaaaaagtactctattatagctaaactgc 233
             |||||| ||||||||||||| ||||||||
Sbjct: 14195 aaaaaaatactctattatagttaaactgc 14167



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>gb|AC007919.18| Homo sapiens 3 BAC RP11-408H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184989

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 205    aaaaaagtactctattatagctaaactgc 233
              |||||| ||||||||||||| ||||||||
Sbjct: 121931 aaaaaaatactctattatagttaaactgc 121959



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>gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complete sequence
          Length = 122076

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    cacaaggactgaagaacaaaa 88
             |||||||||||||||||||||
Sbjct: 91551 cacaaggactgaagaacaaaa 91571



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>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4,
              complete sequence
          Length = 152488

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    atgaatacaaaagaagatact 145
              |||||||||||||||||||||
Sbjct: 102703 atgaatacaaaagaagatact 102723



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>gb|AC010072.5|AC010072 Homo sapiens chromosome 14q31 clone CTD-2173I4 containing TSHR gene,
             partial cds; and unknown gene, complete sequence
          Length = 124347

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    aaggactgaagaacaaaagac 91
             |||||||||||||||||||||
Sbjct: 23833 aaggactgaagaacaaaagac 23853



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>emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 in linkage group 4,
             complete sequence
          Length = 85097

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   atgaatacaaaagaagatact 145
             |||||||||||||||||||||
Sbjct: 15632 atgaatacaaaagaagatact 15652



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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 99      tcaaaattgaaaatgaagatt 119
               |||||||||||||||||||||
Sbjct: 2690211 tcaaaattgaaaatgaagatt 2690231



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>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
              sequence
          Length = 224038

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    cattttcatgattcatgattg 270
              |||||||||||||||||||||
Sbjct: 206210 cattttcatgattcatgattg 206190



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>emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chromosome X, complete
             sequence
          Length = 198572

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 157   gcaaaatgataatattcacgacaatttaactatgtca 193
             |||||||||| |||| ||| | |||||||||||||||
Sbjct: 20012 gcaaaatgattatatgcactagaatttaactatgtca 20048



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>ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1200009H11
           (LOC419818), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 483 caaagttctgtgagaagatt 502
           ||||||||||||||||||||
Sbjct: 512 caaagttctgtgagaagatt 531



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>gb|AC140370.3| Mus musculus BAC clone RP24-75N6 from chromosome 7, complete sequence
          Length = 189786

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aatacaaaagaagatactca 147
             ||||||||||||||||||||
Sbjct: 42564 aatacaaaagaagatactca 42583



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>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete
              sequence
          Length = 193958

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    tgaatacaaaagaagatact 145
              ||||||||||||||||||||
Sbjct: 163379 tgaatacaaaagaagatact 163398



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>ref|XM_643567.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (414.t00005)
           partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 aagtgattcgacaatgtcaa 468
           ||||||||||||||||||||
Sbjct: 450 aagtgattcgacaatgtcaa 469



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>ref|XM_644716.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (269.t00009)
           partial mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 aagtgattcgacaatgtcaa 468
           ||||||||||||||||||||
Sbjct: 717 aagtgattcgacaatgtcaa 736



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>ref|XM_648378.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (82.t00004)
           partial mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 aagtgattcgacaatgtcaa 468
           ||||||||||||||||||||
Sbjct: 717 aagtgattcgacaatgtcaa 736



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>ref|XM_648663.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (73.t00030)
           partial mRNA
          Length = 768

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 aagtgattcgacaatgtcaa 468
           ||||||||||||||||||||
Sbjct: 630 aagtgattcgacaatgtcaa 649



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>ref|XM_660450.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.10343)
            partial mRNA
          Length = 3963

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  caaaattgaaaatgaagatt 119
            ||||||||||||||||||||
Sbjct: 2777 caaaattgaaaatgaagatt 2758



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>gb|AY319521.1| Synthetic construct Bacteriophage SopE-Phi kanamycin cassette
            insertion derivative, complete sequence
          Length = 35155

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   ctcaaaattgaaaatgaaga 117
            ||||||||||||||||||||
Sbjct: 9576 ctcaaaattgaaaatgaaga 9595



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>emb|AL391318.21| Human DNA sequence from clone RP11-496H23 on chromosome 10, complete
             sequence
          Length = 45312

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   tacaaaagaagatactcaaatgac 153
             |||||||||||||| |||||||||
Sbjct: 30051 tacaaaagaagatattcaaatgac 30074



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>gb|AC090698.14| Homo sapiens chromosome 17, clone RP11-296K13, complete sequence
          Length = 87790

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gcaaaatgataatattcacg 176
             ||||||||||||||||||||
Sbjct: 50672 gcaaaatgataatattcacg 50691



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>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1,
              complete sequence
          Length = 153891

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    tgaatacaaaagaagatact 145
              ||||||||||||||||||||
Sbjct: 138534 tgaatacaaaagaagatact 138553



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>emb|CR394534.6| Zebrafish DNA sequence from clone CH211-276A17 in linkage group 6,
            complete sequence
          Length = 153370

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  tgaatacaaaagaagatact 145
            ||||||||||||||||||||
Sbjct: 9489 tgaatacaaaagaagatact 9508



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>emb|CR392348.10| Zebrafish DNA sequence from clone DKEYP-51A12 in linkage group 13,
             complete sequence
          Length = 89943

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgaatacaaaagaagatact 145
             ||||||||||||||||||||
Sbjct: 78710 tgaatacaaaagaagatact 78691



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>gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, complete sequence
          Length = 115767

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   cctcaacagtactccattttcatg 259
             |||||||||| |||||||||||||
Sbjct: 81440 cctcaacagttctccattttcatg 81417



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>gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171004

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   acaaaagaagatactcaaat 150
             ||||||||||||||||||||
Sbjct: 30996 acaaaagaagatactcaaat 30977



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>emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in linkage group 10,
             complete sequence
          Length = 140734

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgaatacaaaagaagatact 145
             ||||||||||||||||||||
Sbjct: 43795 tgaatacaaaagaagatact 43776



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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    aatcagcaattcaagcgttt 291
              ||||||||||||||||||||
Sbjct: 871749 aatcagcaattcaagcgttt 871768



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>ref|XM_628123.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd1_3070),
            partial mRNA
          Length = 11340

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  caaaattgaaaatgaagatt 119
            ||||||||||||||||||||
Sbjct: 8144 caaaattgaaaatgaagatt 8125



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>gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, complete sequence
          Length = 113087

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   attttcatgattcatgattg 270
             ||||||||||||||||||||
Sbjct: 23376 attttcatgattcatgattg 23357



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>gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, complete sequence
          Length = 132573

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   attctgggcttcaaactcct 534
             ||||||||||||||||||||
Sbjct: 69749 attctgggcttcaaactcct 69768



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>emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3
          Length = 887

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 483 caaagttctgtgagaagatt 502
           ||||||||||||||||||||
Sbjct: 406 caaagttctgtgagaagatt 425



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>gb|AC021713.7|AC021713 Homo sapiens chromosome , clone RP11-63D14, complete sequence
          Length = 148648

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   caaaattgaaaatgaagatt 119
             ||||||||||||||||||||
Sbjct: 95907 caaaattgaaaatgaagatt 95888



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>gb|AC010420.11| Homo sapiens chromosome 5 clone CTD-2187J20, complete sequence
          Length = 88736

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  attttcatgattcatgattg 270
            ||||||||||||||||||||
Sbjct: 2466 attttcatgattcatgattg 2485



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>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence
          Length = 169991

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   acaaaagaagatactcaaat 150
             ||||||||||||||||||||
Sbjct: 71249 acaaaagaagatactcaaat 71230



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>emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in linkage group 10,
             complete sequence
          Length = 247644

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tgaatacaaaagaagatact 145
             ||||||||||||||||||||
Sbjct: 50876 tgaatacaaaagaagatact 50895



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>gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome 7, complete sequence
          Length = 213581

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aatacaaaagaagatactca 147
             ||||||||||||||||||||
Sbjct: 93764 aatacaaaagaagatactca 93783



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>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19,
              complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    tgaatacaaaagaagatact 145
              ||||||||||||||||||||
Sbjct: 145066 tgaatacaaaagaagatact 145047



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>emb|BX465184.7| Zebrafish DNA sequence from clone DKEY-20N10 in linkage group 20,
             complete sequence
          Length = 139351

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgaatacaaaagaagatact 145
             ||||||||||||||||||||
Sbjct: 25758 tgaatacaaaagaagatact 25739



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>emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, complete sequence
          Length = 166695

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgaatacaaaagaagatact 145
             ||||||||||||||||||||
Sbjct: 88841 tgaatacaaaagaagatact 88822



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>emb|BX005067.6| Zebrafish DNA sequence from clone CH211-182K2 in linkage group 24,
              complete sequence
          Length = 162692

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    tgaatacaaaagaagatact 145
              ||||||||||||||||||||
Sbjct: 118093 tgaatacaaaagaagatact 118074



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>emb|AL772339.5| Zebrafish DNA sequence from clone CH211-139K23, complete sequence
          Length = 166809

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    tgaatacaaaagaagatact 145
              ||||||||||||||||||||
Sbjct: 115254 tgaatacaaaagaagatact 115235



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>gb|M79460.1|BACHYMEPR B.firmus hypothetical membrane protein and hypothetical lipoprotein,
            complete CDS's
          Length = 1200

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  tgaaaatgaagattgaggaa 125
            ||||||||||||||||||||
Sbjct: 1090 tgaaaatgaagattgaggaa 1109



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>dbj|AB026531.1| Lordiphosa pseudotenuicauda gene for alcohol dehydrogenase, partial
           cds
          Length = 820

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 agcaattcaagcgtttagtt 295
           ||||||||||||||||||||
Sbjct: 570 agcaattcaagcgtttagtt 551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,192,847
Number of Sequences: 3902068
Number of extensions: 6192847
Number of successful extensions: 116020
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115809
Number of HSP's gapped (non-prelim): 211
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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