>VE1_HPV10 (P36720) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 681

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +1

Query: 49  KLECPAMKLLTDIVRRSEQRWEQV*SRYERITTLNP 156
           +L+CP + + T+I   +++RW+ + SR +  T  NP
Sbjct: 588 QLKCPPLLITTNINPLTDERWKFLRSRLQLFTFKNP 623

>VE1_HPV27 (P36723) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 643

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 49  KLECPAMKLLTDIVRRSEQRWEQV*SRYERITTLNP 156
           +L+CP + + T+I    E RW+ + SR    T  NP
Sbjct: 550 QLKCPPLMITTNINPLEEDRWKYLRSRLTLFTFNNP 585

>VE1_HPV29 (P50764) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 660

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 49  KLECPAMKLLTDIVRRSEQRWEQV*SRYERITTLNPSAL 165
           +L+CP + + T++    + RW+ + SR +  T  NP  L
Sbjct: 567 QLKCPPLLITTNVNPLEDDRWKYLRSRLQVFTFSNPCPL 605

>IF2M_SCHPO (O59683) Translation initiation factor IF-2, mitochondrial|
           precursor (IF-2Mt) (IF-2(Mt))
          Length = 686

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 7   WRGMPIRGENIRPRKLECPAMKLLTDIVRRSEQR 108
           W+ +PI G+     K E  A ++L+DI R+S ++
Sbjct: 413 WKDLPIAGDLAYEVKSESEAKRILSDIYRQSNEQ 446

>COX17_PIG (P81045) Cytochrome c oxidase copper chaperone (Dopuin)|
          Length = 62

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 224 IVQNGEDAXXKWIXXHRQCLRAEGFNV 144
           I++ GE+     I  H++C+RA GF +
Sbjct: 36  IIEKGEEHCGHLIEAHKECMRALGFKI 62

>COX17_MOUSE (P56394) Cytochrome c oxidase copper chaperone|
          Length = 62

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 224 IVQNGEDAXXKWIXXHRQCLRAEGFNV 144
           I++ GE+     I  H++C+RA GF +
Sbjct: 36  IIEKGEEHCGHLIEAHKECMRALGFKI 62

>COX17_HUMAN (Q14061) Cytochrome c oxidase copper chaperone|
          Length = 62

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 224 IVQNGEDAXXKWIXXHRQCLRAEGFNV 144
           I++ GE+     I  H++C+RA GF +
Sbjct: 36  IIEKGEEHCGHLIEAHKECMRALGFKI 62

>COX17_CANFA (Q6J3Q7) Cytochrome c oxidase copper chaperone|
          Length = 62

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 224 IVQNGEDAXXKWIXXHRQCLRAEGFNV 144
           I++ GE+     I  H++C+RA GF +
Sbjct: 36  IIEKGEEHCGHLIEAHKECMRALGFKI 62

>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20|
          Length = 701

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 76  LTDIVRRSEQRWEQV*SRYERITTLNPSALKH 171
           L +I+ R+E+R+ Q  +RYE    LN   L+H
Sbjct: 650 LYNIICRAEERYSQYENRYENENRLNKIKLQH 681


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,908,294
Number of Sequences: 219361
Number of extensions: 515406
Number of successful extensions: 1241
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)