ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481268.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-37
2dbj|AK100935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
3gb|AY247211.1| Hordeum vulgare subsp. vulgare alpha-SNAP mRNA, p... 155 2e-34
4gb|AY104060.1| Zea mays PCO133307 mRNA sequence 145 2e-31
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
6dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
7dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
8gb|BT018828.1| Zea mays clone EL01N0551C05.d mRNA sequence 74 6e-10
9gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 46 0.14
10gb|AY116074.1| Takifugu rubripes RHBG mRNA, complete cds 44 0.56
11gb|AY353247.1| Oryzias latipes RhBG-like protein mRNA, complete cds 44 0.56
12ref|NM_001032646.1| Takifugu rubripes RhBG protein (RhBG), mRNA 44 0.56
13gb|AY865614.1| Tetraodon nigroviridis Rh type B glycoprotein mRN... 44 0.56
14emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 o... 44 0.56
15gb|AC008243.6|AC008243 Homo sapiens, clone RP11-45L9, complete s... 44 0.56
16gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome... 42 2.2
17gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosom... 42 2.2
18emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chr... 42 2.2
19gb|AC048352.18| Homo sapiens 12 BAC RP11-871F6 (Roswell Park Can... 42 2.2
20gb|AC010545.9| Homo sapiens chromosome 16 clone RP11-449H11, com... 42 2.2
21ref|NM_078101.1| Caenorhabditis elegans H03G16.4 (H03G16.4) mRNA... 42 2.2
22gb|AC012459.7| Homo sapiens BAC clone RP11-527G2 from 2, complet... 42 2.2
23dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 2.2
24gb|AC151990.6| Mus musculus BAC clone RP23-299K14 from chromosom... 42 2.2
25emb|Z92790.1|CEH03G16 Caenorhabditis elegans Fosmid H03G16, comp... 42 2.2
26gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, comple... 42 2.2
27gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome... 40 8.8
28ref|XM_641234.1| Dictyostelium discoideum hypothetical protein (... 40 8.8
29ref|XM_638842.1| Dictyostelium discoideum hypothetical protein (... 40 8.8
30ref|XM_629931.1| Dictyostelium discoideum hypothetical protein (... 40 8.8
31ref|XM_516687.1| PREDICTED: Pan troglodytes similar to KIAA0036 ... 40 8.8
32gb|AC137713.8| Mus musculus chromosome 15, clone RP24-468P6, com... 40 8.8
33gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
34ref|XM_615634.2| PREDICTED: Bos taurus similar to forkhead box O... 40 8.8
35gb|DQ491003.1| Chlorella virus AR158 ctg_1047243734156 genomic s... 40 8.8
36gb|AY808534.1| Schistosoma japonicum SJCHGC06569 protein mRNA, p... 40 8.8
37gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
38emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 ... 40 8.8
39emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 40 8.8
40emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in ... 40 8.8
41ref|XM_721492.1| Plasmodium yoelii yoelii str. 17XNL mature-para... 40 8.8
42ref|XM_724561.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.8
43ref|XM_846130.1| PREDICTED: Canis familiaris similar to small an... 40 8.8
44ref|XM_858213.1| PREDICTED: Canis familiaris similar to small an... 40 8.8
45ref|XM_858189.1| PREDICTED: Canis familiaris similar to small an... 40 8.8
46ref|XM_858167.1| PREDICTED: Canis familiaris similar to small an... 40 8.8
47ref|XM_858145.1| PREDICTED: Canis familiaris similar to small an... 40 8.8
48ref|XM_858127.1| PREDICTED: Canis familiaris similar to small an... 40 8.8
49gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosom... 40 8.8
50gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete se... 40 8.8
51gb|AC137079.9| Medicago truncatula clone mth2-27d17, complete se... 40 8.8
52ref|XM_782002.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.8
53emb|AL929588.11| Mouse DNA sequence from clone RP23-87L24 on chr... 40 8.8
54emb|AL591420.5| Zebrafish DNA sequence from clone BUSM1-221H6 in... 40 8.8
55gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nippo... 40 8.8
56dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
57dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
59gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosom... 40 8.8
60gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 40 8.8
61gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 40 8.8
62gb|AC084854.11| Homo sapiens chromosome 15, clone CTD-3006F8, co... 40 8.8
63emb|Y16564.1|PBY16564 Phyllomedusa bicolor mRNA for preprodermas... 40 8.8
64emb|BX897748.11| Zebrafish DNA sequence from clone CH211-152M4 i... 40 8.8
65emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in ... 40 8.8
66emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 i... 40 8.8
67gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
68gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
69dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.8
70gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, c... 40 8.8 
>ref|XM_481268.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1292

 Score =  165 bits (83), Expect = 2e-37
 Identities = 143/163 (87%)
 Strand = Plus / Minus

                                                                        
Query: 171  cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 230
            ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 1008 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 949

                                                                        
Query: 231  gcagtgtcgttttccaaggatccaggcgtgtcatgccgtcaaattccttgatggcatcag 290
            | || || |||||||| || ||||| |||||||||| |||||||||||| ||||||||||
Sbjct: 948  ggagggttgttttccaggggtccagacgtgtcatgctgtcaaattccttaatggcatcag 889

                                                       
Query: 291  taaatttggcaacatctccgtcgtccattgatgcagcaagatc 333
            | || |||||||||||||| || ||||| | ||||||||||||
Sbjct: 888  tgaacttggcaacatctccttcctccatagctgcagcaagatc 846
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>dbj|AK100935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136I24, full
            insert sequence
          Length = 1292

 Score =  165 bits (83), Expect = 2e-37
 Identities = 143/163 (87%)
 Strand = Plus / Minus

                                                                        
Query: 171  cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 230
            ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 1008 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 949

                                                                        
Query: 231  gcagtgtcgttttccaaggatccaggcgtgtcatgccgtcaaattccttgatggcatcag 290
            | || || |||||||| || ||||| |||||||||| |||||||||||| ||||||||||
Sbjct: 948  ggagggttgttttccaggggtccagacgtgtcatgctgtcaaattccttaatggcatcag 889

                                                       
Query: 291  taaatttggcaacatctccgtcgtccattgatgcagcaagatc 333
            | || |||||||||||||| || ||||| | ||||||||||||
Sbjct: 888  tgaacttggcaacatctccttcctccatagctgcagcaagatc 846
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>gb|AY247211.1| Hordeum vulgare subsp. vulgare alpha-SNAP mRNA, partial cds
          Length = 336

 Score =  155 bits (78), Expect = 2e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                       
Query: 256 gcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgtcgtc 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgtcgtc 277

                             
Query: 316 cattgatgcagcaagatc 333
           ||||||||||||||||||
Sbjct: 276 cattgatgcagcaagatc 259



 Score =  103 bits (52), Expect = 7e-19
 Identities = 52/52 (100%)
 Strand = Plus / Minus

                                                               
Query: 479 cagctaaaagtttgtattcgcgagttcctgagaaagtcggatcaatttcctg 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagctaaaagtttgtattcgcgagttcctgagaaagtcggatcaatttcctg 208



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 604 cctggtatctctncaacgaattttgtatagcaacggtatcag 645
           |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 211 cctggtatctctccaacgaattttgtatagcaacggtatcag 170
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>gb|AY104060.1| Zea mays PCO133307 mRNA sequence
          Length = 1368

 Score =  145 bits (73), Expect = 2e-31
 Identities = 130/149 (87%)
 Strand = Plus / Minus

                                                                        
Query: 185  tcctcatcatcctcttgtttcttcagttcattctttgccctcagcagcagtgtcgttttc 244
            |||||||| ||||| | ||||||||| || ||||| ||||| |||||||| || ||||||
Sbjct: 1052 tcctcatcgtcctcctttttcttcagctcgttcttcgccctgagcagcagggtggttttc 993

                                                                        
Query: 245  caaggatccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaaca 304
            ||||||||||| ||||||||||  |||||||| ||||| |||||||| ||||||||||||
Sbjct: 992  caaggatccagacgtgtcatgctatcaaattctttgattgcatcagtgaatttggcaaca 933

                                         
Query: 305  tctccgtcgtccattgatgcagcaagatc 333
            || || || ||||| ||||||||||||||
Sbjct: 932  tccccttcatccatagatgcagcaagatc 904



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 479 cagctaaaagtttgtattcgcgagttcctgagaaagtcggatcaatttcctg 530
           |||||||||| |||||||| || || || ||||||||||| |||||||||||
Sbjct: 904 cagctaaaagcttgtattcacgtgtcccagagaaagtcgggtcaatttcctg 853
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                            
Query: 252      ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgt 311
                |||| |||||||||| |||||||||||| ||||||||||| || |||||||||||||| |
Sbjct: 11101199 ccagacgtgtcatgctgtcaaattccttaatggcatcagtgaacttggcaacatctcctt 11101140

                                        
Query: 312      cgtccattgatgcagcaagatcct 335
                | ||||| | ||||||||||||||
Sbjct: 11101139 cctccatagctgcagcaagatcct 11101116



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                            
Query: 171      cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 230
                ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 11101598 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 11101539

                                
Query: 231      gcagtgtcgttttcca 246
                | || || ||||||||
Sbjct: 11101538 ggagggttgttttcca 11101523



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 470      tgtatcatacagctaaaagtttgtattcgcgagttcctgagaaagtcggatcaatttcct 529
                |||||||||||| |||||| |||||||| || || || ||||| || || ||||| ||||
Sbjct: 11100943 tgtatcatacagataaaagcttgtattctcgtgtccccgagaatgttgggtcaatatcct 11100884

                    
Query: 530      gcaa 533
                ||||
Sbjct: 11100883 gcaa 11100880
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>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1446H11
          Length = 135488

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                         
Query: 252   ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgt 311
             |||| |||||||||| |||||||||||| ||||||||||| || |||||||||||||| |
Sbjct: 71805 ccagacgtgtcatgctgtcaaattccttaatggcatcagtgaacttggcaacatctcctt 71746

                                     
Query: 312   cgtccattgatgcagcaagatcct 335
             | ||||| | ||||||||||||||
Sbjct: 71745 cctccatagctgcagcaagatcct 71722



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 171   cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 230
             ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 72204 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 72145

                             
Query: 231   gcagtgtcgttttcca 246
             | || || ||||||||
Sbjct: 72144 ggagggttgttttcca 72129



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 470   tgtatcatacagctaaaagtttgtattcgcgagttcctgagaaagtcggatcaatttcct 529
             |||||||||||| |||||| |||||||| || || || ||||| || || ||||| ||||
Sbjct: 71549 tgtatcatacagataaaagcttgtattctcgtgtccccgagaatgttgggtcaatatcct 71490

                 
Query: 530   gcaa 533
             ||||
Sbjct: 71489 gcaa 71486
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>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                         
Query: 252   ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgt 311
             |||| |||||||||| |||||||||||| ||||||||||| || |||||||||||||| |
Sbjct: 59715 ccagacgtgtcatgctgtcaaattccttaatggcatcagtgaacttggcaacatctcctt 59656

                                     
Query: 312   cgtccattgatgcagcaagatcct 335
             | ||||| | ||||||||||||||
Sbjct: 59655 cctccatagctgcagcaagatcct 59632



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 171   cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 230
             ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 60114 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 60055

                             
Query: 231   gcagtgtcgttttcca 246
             | || || ||||||||
Sbjct: 60054 ggagggttgttttcca 60039



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 470   tgtatcatacagctaaaagtttgtattcgcgagttcctgagaaagtcggatcaatttcct 529
             |||||||||||| |||||| |||||||| || || || ||||| || || ||||| ||||
Sbjct: 59459 tgtatcatacagataaaagcttgtattctcgtgtccccgagaatgttgggtcaatatcct 59400

                 
Query: 530   gcaa 533
             ||||
Sbjct: 59399 gcaa 59396
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>gb|BT018828.1| Zea mays clone EL01N0551C05.d mRNA sequence
          Length = 1753

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 173  taggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagcagc 232
            |||||||||||||||||||| ||||| | ||||||||  || ||||||||| |||| || 
Sbjct: 1527 taggttagatcatcctcatcctcctcctttttcttcaactcgttctttgccttcagaagg 1468

                                 
Query: 233  agtgtcgttttccaaggatcc 253
            || || |||||||||||||||
Sbjct: 1467 agagttgttttccaaggatcc 1447



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 252  ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctcc 309
            ||||||||||||||| |||||| ||||| |  ||||||||||| ||| |||| |||||
Sbjct: 1285 ccaggcgtgtcatgctgtcaaactcctttactgcatcagtaaacttgccaacgtctcc 1228
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 181    atcatcctcatcatcctcttgtttctt 207
              ||||||||||||||| |||||||||||
Sbjct: 677139 atcatcctcatcatcgtcttgtttctt 677113
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>gb|AY116074.1| Takifugu rubripes RHBG mRNA, complete cds
          Length = 1418

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 179 agatcatcctcatcatcctctt 200
           ||||||||||||||||||||||
Sbjct: 73  agatcatcctcatcatcctctt 94
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>gb|AY353247.1| Oryzias latipes RhBG-like protein mRNA, complete cds
          Length = 2128

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 179 agatcatcctcatcatcctctt 200
           ||||||||||||||||||||||
Sbjct: 177 agatcatcctcatcatcctctt 198
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>ref|NM_001032646.1| Takifugu rubripes RhBG protein (RhBG), mRNA
          Length = 1418

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 179 agatcatcctcatcatcctctt 200
           ||||||||||||||||||||||
Sbjct: 73  agatcatcctcatcatcctctt 94
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>gb|AY865614.1| Tetraodon nigroviridis Rh type B glycoprotein mRNA, complete cds
          Length = 1356

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 179 agatcatcctcatcatcctctt 200
           ||||||||||||||||||||||
Sbjct: 59  agatcatcctcatcatcctctt 80
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>emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 on chromosome Xp22.11-22.2
              Contains a calcium binding protein P22 (CHP)pseudogene, a
              novel gene, the 3' end of the NHS gene for Nance-Horan
              syndrome (congenital cataracts and dental anomalies), the
              SCML1 gene for sex comb on midleg-like 1 (Drosophila), a
              novel pseudogene and the RAI2 gene for retinoic acid
              induced 2, complete sequence
          Length = 208609

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 453    aaaaggcaaataaatgttgtat 474
              ||||||||||||||||||||||
Sbjct: 172588 aaaaggcaaataaatgttgtat 172567
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>gb|AC008243.6|AC008243 Homo sapiens, clone RP11-45L9, complete sequence
          Length = 161509

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 538   taaaacaacttcagaaatgaag 559
             ||||||||||||||||||||||
Sbjct: 44831 taaaacaacttcagaaatgaag 44852
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>gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome 19, complete sequence
          Length = 170323

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 448    caacaaaaaggcaaataaatg 468
              |||||||||||||||||||||
Sbjct: 104350 caacaaaaaggcaaataaatg 104330
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>gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosome 18, complete sequence
          Length = 184588

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 535    tggtaaaacaacttcagaaat 555
              |||||||||||||||||||||
Sbjct: 135724 tggtaaaacaacttcagaaat 135704
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>emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chromosome 1 Contains the
             5' end of the MAN1A2 gene for mannosidase alpha class 1A
             member 2 and two CpG islands, complete sequence
          Length = 129725

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   tttcttcagttcattctttgc 222
             |||||||||||||||||||||
Sbjct: 98225 tttcttcagttcattctttgc 98245
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>gb|AC048352.18| Homo sapiens 12 BAC RP11-871F6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 216792

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 469    ttgtatcatacagctaaaagt 489
              |||||||||||||||||||||
Sbjct: 202693 ttgtatcatacagctaaaagt 202713
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>gb|AC010545.9| Homo sapiens chromosome 16 clone RP11-449H11, complete sequence
          Length = 170517

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     catgacaaacaaatgacacat 21
             |||||||||||||||||||||
Sbjct: 73611 catgacaaacaaatgacacat 73631
to top
>ref|NM_078101.1| Caenorhabditis elegans H03G16.4 (H03G16.4) mRNA, complete cds
          Length = 1152

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 542 acaacttcagaaatgaagcaa 562
           |||||||||||||||||||||
Sbjct: 706 acaacttcagaaatgaagcaa 686
to top
>gb|AC012459.7| Homo sapiens BAC clone RP11-527G2 from 2, complete sequence
          Length = 175554

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    actatacttcatgataaccaa 388
              |||||||||||||||||||||
Sbjct: 110974 actatacttcatgataaccaa 110954
to top
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 132     aatcacaccatgttgaagcat 152
               |||||||||||||||||||||
Sbjct: 3129010 aatcacaccatgttgaagcat 3128990
to top
>gb|AC151990.6| Mus musculus BAC clone RP23-299K14 from chromosome 18, complete sequence
          Length = 205253

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 535    tggtaaaacaacttcagaaat 555
              |||||||||||||||||||||
Sbjct: 182111 tggtaaaacaacttcagaaat 182131
to top
>emb|Z92790.1|CEH03G16 Caenorhabditis elegans Fosmid H03G16, complete sequence
          Length = 21627

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 542   acaacttcagaaatgaagcaa 562
             |||||||||||||||||||||
Sbjct: 10689 acaacttcagaaatgaagcaa 10709
to top
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence
          Length = 207333

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 430   caaaaggggaaagtgttgcaa 450
             |||||||||||||||||||||
Sbjct: 92662 caaaaggggaaagtgttgcaa 92642
to top
>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence
          Length = 208443

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     attatgcccattatatgtac 98
              ||||||||||||||||||||
Sbjct: 165573 attatgcccattatatgtac 165554
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>ref|XM_641234.1| Dictyostelium discoideum hypothetical protein (DDB0190598), partial
           mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 181 atcatcctcatcatcctctt 200
           ||||||||||||||||||||
Sbjct: 360 atcatcctcatcatcctctt 379
to top
>ref|XM_638842.1| Dictyostelium discoideum hypothetical protein (DDB0167879), partial
           mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 atcatcctcatcatcctctt 200
           ||||||||||||||||||||
Sbjct: 249 atcatcctcatcatcctctt 230
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>ref|XM_629931.1| Dictyostelium discoideum hypothetical protein (DDB0184069), partial
            mRNA
          Length = 3693

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  atcatcctcatcatcctctt 200
            ||||||||||||||||||||
Sbjct: 1038 atcatcctcatcatcctctt 1019
to top
>ref|XM_516687.1| PREDICTED: Pan troglodytes similar to KIAA0036 (LOC460626), mRNA
          Length = 4317

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 191  tcatcctcttgtttcttcagttca 214
            |||||| |||||||||||||||||
Sbjct: 1512 tcatccacttgtttcttcagttca 1489
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>gb|AC137713.8| Mus musculus chromosome 15, clone RP24-468P6, complete sequence
          Length = 155341

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   aaagccaggaaatgcaatga 428
             ||||||||||||||||||||
Sbjct: 47873 aaagccaggaaatgcaatga 47892
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>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0046F10, complete sequence
          Length = 184041

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   aaagtgttgcaacaaaaagg 458
             ||||||||||||||||||||
Sbjct: 41801 aaagtgttgcaacaaaaagg 41782
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>ref|XM_615634.2| PREDICTED: Bos taurus similar to forkhead box O3A (LOC535530), mRNA
          Length = 3564

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  aggcatacaaatgtataaat 134
            ||||||||||||||||||||
Sbjct: 3498 aggcatacaaatgtataaat 3517
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>gb|DQ491003.1| Chlorella virus AR158 ctg_1047243734156 genomic sequence
          Length = 344691

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      atgacaaacaaatgacacat 21
              ||||||||||||||||||||
Sbjct: 333361 atgacaaacaaatgacacat 333342
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>gb|AY808534.1| Schistosoma japonicum SJCHGC06569 protein mRNA, partial cds
          Length = 740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 567 agaataactggttcagattt 586
           ||||||||||||||||||||
Sbjct: 335 agaataactggttcagattt 316
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 193      atcctcttgtttcttcagtt 212
                ||||||||||||||||||||
Sbjct: 34986995 atcctcttgtttcttcagtt 34986976
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>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7,
              complete sequence
          Length = 208436

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 453    aaaaggcaaataaatgttgtatcataca 480
              ||||||||||||||| ||||||||||||
Sbjct: 127136 aaaaggcaaataaat-ttgtatcataca 127162
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 530     gcaaatggtaaaacaacttc 549
               ||||||||||||||||||||
Sbjct: 1280016 gcaaatggtaaaacaacttc 1279997
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>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete
              sequence
          Length = 196531

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 453    aaaaggcaaataaatgttgtatcataca 480
              ||||||||||||||| ||||||||||||
Sbjct: 147335 aaaaggcaaataaat-ttgtatcataca 147361
to top
>ref|XM_721492.1| Plasmodium yoelii yoelii str. 17XNL mature-parasite-infected
            erythrocyte surface antigen (PY06014) partial mRNA
          Length = 2286

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  atcatcctcatcatcctctt 200
            ||||||||||||||||||||
Sbjct: 1239 atcatcctcatcatcctctt 1220
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>ref|XM_724561.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00022)
           partial mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 atcatcctcatcatcctctt 200
           ||||||||||||||||||||
Sbjct: 996 atcatcctcatcatcctctt 977
to top
>ref|XM_846130.1| PREDICTED: Canis familiaris similar to small androgen
            receptor-interacting protein, transcript variant 1
            (LOC609552), mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  gatcatcctcatcatcctct 199
            ||||||||||||||||||||
Sbjct: 1123 gatcatcctcatcatcctct 1104
to top
>ref|XM_858213.1| PREDICTED: Canis familiaris similar to small androgen
           receptor-interacting protein, transcript variant 6
           (LOC609552), mRNA
          Length = 1162

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 gatcatcctcatcatcctct 199
           ||||||||||||||||||||
Sbjct: 953 gatcatcctcatcatcctct 934
to top
>ref|XM_858189.1| PREDICTED: Canis familiaris similar to small androgen
           receptor-interacting protein, transcript variant 5
           (LOC609552), mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 gatcatcctcatcatcctct 199
           ||||||||||||||||||||
Sbjct: 832 gatcatcctcatcatcctct 813
to top
>ref|XM_858167.1| PREDICTED: Canis familiaris similar to small androgen
            receptor-interacting protein, transcript variant 4
            (LOC609552), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  gatcatcctcatcatcctct 199
            ||||||||||||||||||||
Sbjct: 1118 gatcatcctcatcatcctct 1099
to top
>ref|XM_858145.1| PREDICTED: Canis familiaris similar to small androgen
            receptor-interacting protein, transcript variant 3
            (LOC609552), mRNA
          Length = 1307

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  gatcatcctcatcatcctct 199
            ||||||||||||||||||||
Sbjct: 1098 gatcatcctcatcatcctct 1079
to top
>ref|XM_858127.1| PREDICTED: Canis familiaris similar to small androgen
           receptor-interacting protein, transcript variant 2
           (LOC609552), mRNA
          Length = 910

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 gatcatcctcatcatcctct 199
           ||||||||||||||||||||
Sbjct: 701 gatcatcctcatcatcctct 682
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>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete
             sequence
          Length = 190724

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   cttcagaaatgaagcaattg 565
             ||||||||||||||||||||
Sbjct: 82653 cttcagaaatgaagcaattg 82634
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>gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete sequence
          Length = 130938

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    tgatcaaaaggggaaagtgt 445
              ||||||||||||||||||||
Sbjct: 117600 tgatcaaaaggggaaagtgt 117619
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>gb|AC137079.9| Medicago truncatula clone mth2-27d17, complete sequence
          Length = 122392

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   atcactatacttcatgataa 384
             ||||||||||||||||||||
Sbjct: 89725 atcactatacttcatgataa 89744
to top
>ref|XM_782002.1| PREDICTED: Strongylocentrotus purpuratus similar to MEGF10 protein
            (LOC582027), mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  atcatcctcatcatcctctt 200
            ||||||||||||||||||||
Sbjct: 1603 atcatcctcatcatcctctt 1622
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>emb|AL929588.11| Mouse DNA sequence from clone RP23-87L24 on chromosome 2, complete
             sequence
          Length = 134787

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   atcatcctcatcatcctctt 200
             ||||||||||||||||||||
Sbjct: 29117 atcatcctcatcatcctctt 29136
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>emb|AL591420.5| Zebrafish DNA sequence from clone BUSM1-221H6 in linkage group 7
             Contains three genes for novel immune-type receptors
             (nitr), complete sequence
          Length = 51019

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 453   aaaaggcaaataaatgttgtatcataca 480
             ||||||||||||||| ||||||||||||
Sbjct: 24136 aaaaggcaaataaat-ttgtatcataca 24110
to top
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060A14, from chromosome 10, complete sequence
          Length = 151343

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   caacaaaaaggcaaataaat 467
             ||||||||||||||||||||
Sbjct: 59272 caacaaaaaggcaaataaat 59291
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 439      aaagtgttgcaacaaaaagg 458
                ||||||||||||||||||||
Sbjct: 11135809 aaagtgttgcaacaaaaagg 11135828
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 448      caacaaaaaggcaaataaat 467
                ||||||||||||||||||||
Sbjct: 13366895 caacaaaaaggcaaataaat 13366914
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 193      atcctcttgtttcttcagtt 212
                ||||||||||||||||||||
Sbjct: 35077067 atcctcttgtttcttcagtt 35077048
to top
>gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosome 16, complete
             sequence
          Length = 202933

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tcttcattatgcccattata 93
             ||||||||||||||||||||
Sbjct: 34186 tcttcattatgcccattata 34167
to top
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    atcatcctcatcatcctctt 200
              ||||||||||||||||||||
Sbjct: 182402 atcatcctcatcatcctctt 182421
to top
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   atcctcttgtttcttcagtt 212
             ||||||||||||||||||||
Sbjct: 28485 atcctcttgtttcttcagtt 28504
to top
>gb|AC084854.11| Homo sapiens chromosome 15, clone CTD-3006F8, complete sequence
          Length = 145201

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   tttcttcagttcattctttg 221
             ||||||||||||||||||||
Sbjct: 91937 tttcttcagttcattctttg 91918
to top
>emb|Y16564.1|PBY16564 Phyllomedusa bicolor mRNA for preprodermaseptine B3
          Length = 352

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ctcatcatcctcttgtttct 206
           ||||||||||||||||||||
Sbjct: 168 ctcatcatcctcttgtttct 149
to top
>emb|BX897748.11| Zebrafish DNA sequence from clone CH211-152M4 in linkage group 4,
             complete sequence
          Length = 64422

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   actattaaagccaggaaatg 422
             ||||||||||||||||||||
Sbjct: 36454 actattaaagccaggaaatg 36473
to top
>emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in linkage group 7,
             complete sequence
          Length = 162939

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 453   aaaaggcaaataaatgttgtatcataca 480
             ||||||||||||||| ||||||||||||
Sbjct: 24218 aaaaggcaaataaat-ttgtatcataca 24192
to top
>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16,
             complete sequence
          Length = 166820

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tgaagcatgaaagaattttt 164
             ||||||||||||||||||||
Sbjct: 87252 tgaagcatgaaagaattttt 87271
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 448      caacaaaaaggcaaataaat 467
                ||||||||||||||||||||
Sbjct: 13374235 caacaaaaaggcaaataaat 13374254
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 439      aaagtgttgcaacaaaaagg 458
                ||||||||||||||||||||
Sbjct: 11214998 aaagtgttgcaacaaaaagg 11215017
to top
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 557   aagcaattgcagaataactg 576
             ||||||||||||||||||||
Sbjct: 78401 aagcaattgcagaataactg 78420
to top
>gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, complete sequence
          Length = 177416

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ttcaaaatgaagttctatacaacc 63
              |||||||||||||||||| |||||
Sbjct: 133445 ttcaaaatgaagttctattcaacc 133422


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,224,056
Number of Sequences: 3902068
Number of extensions: 7224056
Number of successful extensions: 186120
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 185506
Number of HSP's gapped (non-prelim): 622
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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