ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal21a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MAD... 220 7e-55
2gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph M... 220 7e-55
3gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ... 220 7e-55
4gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS... 220 7e-55
5gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS... 220 7e-55
6gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 ... 220 7e-55
7gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois M... 220 7e-55
8gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider M... 220 7e-55
9gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harringto... 220 7e-55
10gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo M... 220 7e-55
11gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 M... 220 7e-55
12gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MAD... 220 7e-55
13gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, co... 220 7e-55
14gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA... 220 7e-55
15gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph B... 220 7e-55
16gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5... 220 7e-55
17gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 220 7e-55
18gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN... 220 7e-55
19gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, com... 220 7e-55
20gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a... 212 2e-52
21emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box prote... 212 2e-52
22gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5... 155 4e-35
23gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 V... 155 4e-35
24gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g... 149 2e-33
25gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g... 149 2e-33
26gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g... 149 2e-33
27gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 149 2e-33
28gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN... 149 2e-33
29gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN... 149 2e-33
30gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN... 149 2e-33
31gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256... 149 2e-33
32emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for puta... 141 5e-31
33gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, ... 92 4e-16
34gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN... 92 4e-16
35gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, ... 92 4e-16
36gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN... 92 4e-16
37gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN... 92 4e-16
38gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225... 92 4e-16
39gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN... 92 4e-16
40dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box tr... 92 4e-16
41gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
42gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
43gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
44gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
45gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
46gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
47gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
48gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
49gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
50gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
51gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
52gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
53gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
54gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
55gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
56gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
57gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
58gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
59gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 70 2e-09
60ref|NM_212656.1| Danio rerio wu:fc12b04 (wu:fc12b04), mRNA 38 5.8
61gb|BC054923.1| Danio rerio wu:fc12b04, mRNA (cDNA clone IMAGE:56... 38 5.8
62gb|AC011230.3| Homo sapiens BAC clone CTD-2324K8 from 7, complet... 38 5.8
63emb|AL160157.17| Human DNA sequence from clone RP11-547C18 on ch... 38 5.8
64emb|BX571770.5| Zebrafish DNA sequence from clone DKEY-276I5 in ... 38 5.8
65gb|AC005079.6|AC005079 Homo sapiens BAC clone CTA-252P22 from 7,... 38 5.8
66gb|AF265342.4| Homo sapiens chromosome 8 clone CTD-2053N22 map p... 38 5.8
67gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Canc... 38 5.8
68gb|AF242545.1|AF242545 Danio rerio protein-glutamine gamma-gluta... 38 5.8 
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1151

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1110 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1051

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 991

               
Query: 121  ctg 123
            |||
Sbjct: 990  ctg 988
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>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1105

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1065 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1006

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 946

               
Query: 121  ctg 123
            |||
Sbjct: 945  ctg 943
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>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box
            protein HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24
            MADS-box protein HvBM5A (BM5A) mRNA, complete cds
          Length = 1117

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1077 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1018

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 958

               
Query: 121  ctg 123
            |||
Sbjct: 957  ctg 955
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>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1117

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1077 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1018

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 958

               
Query: 121  ctg 123
            |||
Sbjct: 957  ctg 955
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>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1073 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1014

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 954

               
Query: 121  ctg 123
            |||
Sbjct: 953  ctg 951
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>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1117

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1077 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1018

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 958

               
Query: 121  ctg 123
            |||
Sbjct: 957  ctg 955
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>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds
          Length = 1153

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1106 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1047

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 987

               
Query: 121  ctg 123
            |||
Sbjct: 986  ctg 984
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>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds
          Length = 1157

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1110 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1051

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 991

               
Query: 121  ctg 123
            |||
Sbjct: 990  ctg 988
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>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete
            cds
          Length = 1145

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1098 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1039

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 979

               
Query: 121  ctg 123
            |||
Sbjct: 978  ctg 976
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>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds
          Length = 12080

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 11174 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 11115

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11114 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 11055

                
Query: 121   ctg 123
             |||
Sbjct: 11054 ctg 11052
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>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 62895 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 62836

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62835 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 62776

                
Query: 121   ctg 123
             |||
Sbjct: 62775 ctg 62773
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>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds
          Length = 12360

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 11944 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 11885

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11884 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 11825

                
Query: 121   ctg 123
             |||
Sbjct: 11824 ctg 11822
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>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and
             transposon MITE-like and retrotransposon Lolaog, complete
             sequence
          Length = 17220

 Score =  220 bits (111), Expect = 7e-55
 Identities = 119/123 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 17155 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 17096

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17095 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 17036

                
Query: 121   ctg 123
             |||
Sbjct: 17035 ctg 17033
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>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds
          Length = 1153

 Score =  212 bits (107), Expect = 2e-52
 Identities = 118/123 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1106 cactcatgctacaaataaattacatggtagattactcgtacagccatctcagcccaggtg 1047

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactttact 987

               
Query: 121  ctg 123
            |||
Sbjct: 986  ctg 984
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>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene)
          Length = 1196

 Score =  212 bits (107), Expect = 2e-52
 Identities = 118/123 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1116 cactcatgctacatataaattacatggtagattactcgtacagccatctcagcccaggtg 1057

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1056 gaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctgctttact 997

               
Query: 121  ctg 123
            |||
Sbjct: 996  ctg 994
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>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds
          Length = 4954

 Score =  155 bits (78), Expect = 4e-35
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 32   ttactcgtacagncatctcagcccaggtggaaaggaaactgnggtggacgaagtgaaata 91
            |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 3780 ttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggacgaagtgaaata 3721

                                            
Query: 92   tacacattcctgcagcttgctactttactctg 123
            |||||||| |||||||||||||||||||||||
Sbjct: 3720 tacacattgctgcagcttgctactttactctg 3689



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    cactcatgctacatataaatt 21
            |||||||||||||||||||||
Sbjct: 3905 cactcatgctacatataaatt 3885
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>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b)
            pseudogene, partial sequence
          Length = 4018

 Score =  155 bits (78), Expect = 4e-35
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 32   ttactcgtacagncatctcagcccaggtggaaaggaaactgnggtggacgaagtgaaata 91
            |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 3828 ttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggacgaagtgaaata 3769

                                            
Query: 92   tacacattcctgcagcttgctactttactctg 123
            |||||||| |||||||||||||||||||||||
Sbjct: 3768 tacacattgctgcagcttgctactttactctg 3737



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    cactcatgctacatataaatt 21
            |||||||||||||||||||||
Sbjct: 3953 cactcatgctacatataaatt 3933
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>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds
          Length = 16224

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 15749 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 15690

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 15689 ggagggaaactgaggtggaccaagtgaaatatacacatcgctgcagcttgctactttact 15630

                
Query: 121   ctg 123
             |||
Sbjct: 15629 ctg 15627
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>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds
          Length = 15688

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 15213 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 15154

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 15153 ggagggaaactgaggtggaccaagtgaaatatacacatcgctgcagcttgctactttact 15094

                
Query: 121   ctg 123
             |||
Sbjct: 15093 ctg 15091
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>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds
          Length = 16209

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 15734 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 15675

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 15674 ggagggaaactgaggtggaccaagtgaaatatacacatcgctgcagcttgctactttact 15615

                
Query: 121   ctg 123
             |||
Sbjct: 15614 ctg 15612
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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 82285 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 82226

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 82225 ggagggaaactgaggtggaccaagtgaaatatacacatcgctgcagcttgctactttact 82166

                
Query: 121   ctg 123
             |||
Sbjct: 82165 ctg 82163
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>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene,
             complete cds; and Stowaway MITE and gypsy retrotransposon
             Sukkula, complete sequence
          Length = 12464

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 12396 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 12337

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 12336 ggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactttact 12277

                
Query: 121   ctg 123
             |||
Sbjct: 12276 ctg 12274
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>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene,
             complete cds; and Stowaway MITE and gypsy retrotransposon
             Sukkula, complete sequence
          Length = 12233

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
             |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 12165 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 12106

                                                                         
Query: 61    gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
             | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 12105 ggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactttact 12046

                
Query: 121   ctg 123
             |||
Sbjct: 12045 ctg 12043
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>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete
            cds; and gypsy retrotransposon Sukkula, complete sequence
          Length = 6730

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 6662 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 6603

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 6602 ggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactttact 6543

               
Query: 121  ctg 123
            |||
Sbjct: 6542 ctg 6540
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>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1)
            gene, complete cds
          Length = 5065

 Score =  149 bits (75), Expect = 2e-33
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
            |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 4997 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 4938

                                                                        
Query: 61   gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
            | | |||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||
Sbjct: 4937 ggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactttact 4878

               
Query: 121  ctg 123
            |||
Sbjct: 4877 ctg 4875
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>emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for putative MADS-box transcription
           factor (mads#11 gene)
          Length = 770

 Score =  141 bits (71), Expect = 5e-31
 Identities = 109/123 (88%)
 Strand = Plus / Minus

                                                                       
Query: 1   cactcatgctacatataaattncatggnagattactcgtacagncatctcagcccaggtg 60
           |||||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 721 cactcaagctacatatagattacatggtaaattactcgtacagccatctcagcccagctg 662

                                                                       
Query: 61  gaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttgctactttact 120
           | | |||||||| ||||||| ||| |||||||||||||  ||||||||||||||||||||
Sbjct: 661 ggagggaaactgaggtggacaaagcgaaatatacacatcgctgcagcttgctactttact 602

              
Query: 121 ctg 123
           |||
Sbjct: 601 ctg 599
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>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds
          Length = 1210

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                        
Query: 51   agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
            ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 1077 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 1018

                         
Query: 111  ctactttactctg 123
            |||||||||||||
Sbjct: 1017 ctactttactctg 1005
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>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene,
             complete cds
          Length = 12335

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 51    agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
             ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 12232 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12173

                          
Query: 111   ctactttactctg 123
             |||||||||||||
Sbjct: 12172 ctactttactctg 12160
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>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds
          Length = 12224

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 51    agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
             ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 12121 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12062

                          
Query: 111   ctactttactctg 123
             |||||||||||||
Sbjct: 12061 ctactttactctg 12049
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>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene,
             complete cds
          Length = 13141

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 51    agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
             ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980

                          
Query: 111   ctactttactctg 123
             |||||||||||||
Sbjct: 12979 ctactttactctg 12967
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>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene,
            complete cds
          Length = 6297

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                        
Query: 51   agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
            ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 6195 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 6136

                         
Query: 111  ctactttactctg 123
            |||||||||||||
Sbjct: 6135 ctactttactctg 6123
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>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1)
             gene, complete cds
          Length = 13141

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 51    agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
             ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980

                          
Query: 111   ctactttactctg 123
             |||||||||||||
Sbjct: 12979 ctactttactctg 12967
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>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene,
            complete cds
          Length = 8100

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                        
Query: 51   agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
            ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 7997 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 7938

                         
Query: 111  ctactttactctg 123
            |||||||||||||
Sbjct: 7937 ctactttactctg 7925
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>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor,
            complete cds
          Length = 1161

 Score = 91.7 bits (46), Expect = 4e-16
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                        
Query: 51   agcccaggtggaaaggaaactgnggtggacgaagtgaaatatacacattcctgcagcttg 110
            ||||||| ||| | |||||||| ||||||| |||||||||||||||||  ||||||||||
Sbjct: 1002 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 943

                         
Query: 111  ctactttactctg 123
            |||||||||||||
Sbjct: 942  ctactttactctg 930
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>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1214

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1214 atatacacattcctgcagcttgctactttactctg 1180
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>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatacacattcctgcagcttgctactttactctg 1226
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>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1262 atatacacattcctgcagcttgctactttactctg 1228
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>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1262 atatacacattcctgcagcttgctactttactctg 1228
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>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1262 atatacacattcctgcagcttgctactttactctg 1228
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>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1261 atatacacattcctgcagcttgctactttactctg 1227
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>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1261 atatacacattcctgcagcttgctactttactctg 1227
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>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1262 atatacacattcctgcagcttgctactttactctg 1228
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>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1262 atatacacattcctgcagcttgctactttactctg 1228
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>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1261 atatacacattcctgcagcttgctactttactctg 1227
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>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatacacattcctgcagcttgctactttactctg 1226
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>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatacacattcctgcagcttgctactttactctg 1226
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>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1259

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1259 atatacacattcctgcagcttgctactttactctg 1225
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>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatacacattcctgcagcttgctactttactctg 1226
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>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1261 atatacacattcctgcagcttgctactttactctg 1227
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>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1261 atatacacattcctgcagcttgctactttactctg 1227
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>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1259

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1259 atatacacattcctgcagcttgctactttactctg 1225
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>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatacacattcctgcagcttgctactttactctg 1226
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>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 89   atatacacattcctgcagcttgctactttactctg 123
            |||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatacacattcctgcagcttgctactttactctg 1226
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>ref|NM_212656.1| Danio rerio wu:fc12b04 (wu:fc12b04), mRNA
          Length = 2521

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   tgaaatatacacattcctg 103
            |||||||||||||||||||
Sbjct: 2288 tgaaatatacacattcctg 2306
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>gb|BC054923.1| Danio rerio wu:fc12b04, mRNA (cDNA clone IMAGE:5601464), partial cds
          Length = 2159

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   tgaaatatacacattcctg 103
            |||||||||||||||||||
Sbjct: 1953 tgaaatatacacattcctg 1971
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>gb|AC011230.3| Homo sapiens BAC clone CTD-2324K8 from 7, complete sequence
          Length = 91311

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    agtgaaatatacacattcc 101
             |||||||||||||||||||
Sbjct: 37400 agtgaaatatacacattcc 37382
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>emb|AL160157.17| Human DNA sequence from clone RP11-547C18 on chromosome 13 Contains the
              5' end of the GUCY1B2 gene for guanylate cyclase 1 soluble
              beta 2 and part of a novel gene, complete sequence
          Length = 127227

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 48     ctcagcccaggtggaaagg 66
              |||||||||||||||||||
Sbjct: 112065 ctcagcccaggtggaaagg 112047
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>emb|BX571770.5| Zebrafish DNA sequence from clone DKEY-276I5 in linkage group 24,
           complete sequence
          Length = 210504

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 88  aatatacacattcctgcag 106
           |||||||||||||||||||
Sbjct: 53  aatatacacattcctgcag 35
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>gb|AC005079.6|AC005079 Homo sapiens BAC clone CTA-252P22 from 7, complete sequence
          Length = 415268

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 106    gcttgctactttactctgg 124
              |||||||||||||||||||
Sbjct: 257667 gcttgctactttactctgg 257685
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>gb|AF265342.4| Homo sapiens chromosome 8 clone CTD-2053N22 map p22-p21, complete
             sequence
          Length = 141254

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 83    agtgaaatatacacattcc 101
             |||||||||||||||||||
Sbjct: 11836 agtgaaatatacacattcc 11854
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>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158176

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     ctcatgctacatataaatt 21
             |||||||||||||||||||
Sbjct: 17772 ctcatgctacatataaatt 17790
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>gb|AF242545.1|AF242545 Danio rerio protein-glutamine gamma-glutamyltransferase mRNA,
            complete cds
          Length = 2521

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   tgaaatatacacattcctg 103
            |||||||||||||||||||
Sbjct: 2288 tgaaatatacacattcctg 2306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 911,720
Number of Sequences: 3902068
Number of extensions: 911720
Number of successful extensions: 57605
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57532
Number of HSP's gapped (non-prelim): 73
length of query: 124
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 103
effective length of database: 17,151,101,840
effective search space: 1766563489520
effective search space used: 1766563489520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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