ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal20l24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 Score = 105 bits (53), Expect = 7e-20 Identities = 98/113 (86%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagc 227 |||| |||| ||||| |||| |||||||| ||||||||| |||||||||||||||||||| Sbjct: 1089 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagcttcagc 1030 Query: 228 gtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccag 280 ||||||| |||||| ||||| |||||||| || |||| ||||| ||||||| Sbjct: 1029 gtagtctggagccccaaaaactgcagaacctgcgacaatggcatttgcgccag 977
>gb|AF047444.1|AF047444 Oryza sativa ribulose-5-phosphate-3-epimerase (RPE) mRNA, complete cds Length = 1050 Score = 101 bits (51), Expect = 1e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 171 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 230 |||||||| ||| || |||||||||||||||||||| ||||| ||||||||||| || || Sbjct: 918 tcatgctggtacagccacaggtcttttgctggtcttgattcccttgatagcttctgcata 859 Query: 231 gtctttagccccgaaaaccgcagaaccagcaacaa 265 |||| |||||||||||| || ||||||||||||| Sbjct: 858 gtctggagccccgaaaacggctgaaccagcaacaa 824
>ref|XM_470294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 85.7 bits (43), Expect = 7e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 171 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 230 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 918 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 859 Query: 231 gtctttagccccgaaaaccgcagaaccagcaacaa 265 |||| |||||||||||| || ||||||||||||| Sbjct: 858 gtctggagccccgaaaacggctgaaccagcaacaa 824
>dbj|AK099215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084F18, full insert sequence Length = 1122 Score = 85.7 bits (43), Expect = 7e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 171 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 230 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 874 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 815 Query: 231 gtctttagccccgaaaaccgcagaaccagcaacaa 265 |||| |||||||||||| || ||||||||||||| Sbjct: 814 gtctggagccccgaaaacggctgaaccagcaacaa 780
>dbj|AK066306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061C21, full insert sequence Length = 1276 Score = 85.7 bits (43), Expect = 7e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 171 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 230 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 907 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 848 Query: 231 gtctttagccccgaaaaccgcagaaccagcaacaa 265 |||| |||||||||||| || ||||||||||||| Sbjct: 847 gtctggagccccgaaaacggctgaaccagcaacaa 813
>dbj|AK061772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C12, full insert sequence Length = 1113 Score = 85.7 bits (43), Expect = 7e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 171 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 230 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 890 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 831 Query: 231 gtctttagccccgaaaaccgcagaaccagcaacaa 265 |||| |||||||||||| || ||||||||||||| Sbjct: 830 gtctggagccccgaaaacggctgaaccagcaacaa 796
>gb|AF015274.1|AF015274 Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1259 Score = 69.9 bits (35), Expect = 4e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 932 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 873 Query: 250 gcagaaccagcaacaagagcatt 272 || |||||||| || |||||||| Sbjct: 872 gctgaaccagccactagagcatt 850
>ref|NM_125534.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.2 mRNA, complete cds Length = 1271 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 965 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 906 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 905 gctgatccagccactagagcatt 883
>ref|NM_180909.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.1 mRNA, complete cds Length = 1408 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1096 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1037 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 1036 gctgatccagccactagagcatt 1014
>gb|AY513905.1| Zea mays subsp. parviglumis voucher PI331786 RFLP marker csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377719.1| Zea mays subsp. mays clone B73 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377714.1| Zea mays subsp. mays clone Mo24W anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377712.1| Zea mays subsp. mays clone Ky21 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377711.1| Zea mays subsp. mays clone W153R anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377710.1| Zea mays subsp. mays clone SIN2 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377709.1| Zea mays subsp. mays clone SAN329 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377708.1| Zea mays subsp. mays clone APC13 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377706.1| Zea mays subsp. mays clone PI213793 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377699.1| Zea mays subsp. mays clone GUA131 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377698.1| Zea mays subsp. mays clone OAX68 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377695.1| Zea mays subsp. mays clone CHI349 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY091381.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 877 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 827 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 768 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 767 gctgatccagccactagagcatt 745
>gb|AY045855.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 1280 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 959 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 900 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 899 gctgatccagccactagagcatt 877
>emb|BX830111.1|CNS0A1DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 997 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 996 gctgatccagccactagagcatt 974
>emb|BX832763.1|CNS0A101 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1067 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1008 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 1007 gctgatccagccactagagcatt 985
>emb|BX832544.1|CNS0A11A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1068 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1009 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 1008 gctgatccagccactagagcatt 986
>emb|BX832443.1|CNS0A0ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| ||||| || |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgctggccttaattccttttatagcgtcggcgtagtccttagcgccaaataca 997 Query: 250 gcagaaccagcaacaagagcattcgcgccag 280 || || ||||| || |||||||| ||||||| Sbjct: 996 gcggatccagccacgagagcatttgcgccag 966
>emb|BX832214.1|CNS0A123 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1096 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1037 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 1036 gctgatccagccactagagcatt 1014
>emb|BX831851.1|CNS0A0WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| ||||| || |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1111 ggtcgtttgcgggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1052 Query: 250 gcagaaccagcaacaagagcattcgcgccag 280 || || ||||| || |||||||| ||||||| Sbjct: 1051 gctgatccagcgacgagagcatttgcgccag 1021
>gb|AY513910.1| Zea luxurians voucher G-5 RFLP marker csu1171 Length = 414 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513909.1| Zea mays subsp. mexicana voucher PI566673 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513908.1| Zea mays subsp. mexicana voucher 11066 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513907.1| Zea luxurians voucher PI311282 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513904.1| Zea mays subsp. parviglumis voucher PI331783 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcagctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513903.1| Zea mays subsp. parviglumis voucher 967 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513902.1| Zea mays subsp. parviglumis voucher Site4 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513901.1| Zea mays subsp. parviglumis voucher Site3 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513900.1| Zea mays subsp. parviglumis voucher PI566691 RFLP marker csu1171 Length = 467 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513898.1| Zea mays subsp. parviglumis voucher PI384062 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513897.1| Zea mays subsp. parviglumis voucher PI331789 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513896.1| Zea mays subsp. mexicana voucher s.n.2 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513895.1| Zea mays subsp. mexicana voucher 5630 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513894.1| Zea mays subsp. mexicana voucher 28620 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513893.1| Zea mays subsp. mexicana voucher PI566685 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513892.1| Zea mays subsp. mexicana voucher PI566682 RFLP marker csu1171 Length = 432 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513891.1| Zea mays subsp. mexicana voucher PI566681 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513890.1| Zea mays subsp. mexicana voucher PI566680 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513888.1| Zea luxurians voucher 30900 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513887.1| Zea luxurians voucher G-38 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513886.1| Zea luxurians voucher G-36 RFLP marker csu1171 Length = 466 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513885.1| Zea luxurians voucher G-42 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513884.1| Zea luxurians voucher 2440 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377720.1| Tripsacum dactyloides clone T. anonymous genomic RFLP marker Csu1171 Length = 467 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 164 atgcagctacagctagaggtctttggctggtcttgattcctttgatagct 115
>gb|AF377718.1| Zea mays subsp. mays clone Tx601 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377717.1| Zea mays subsp. mays clone T8 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377716.1| Zea mays subsp. mays clone OH43 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377715.1| Zea mays subsp. mays clone NC258 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377713.1| Zea mays subsp. mays clone Mo17 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377707.1| Zea mays subsp. mays clone CHH160 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377705.1| Zea mays subsp. mays clone VEN453 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377704.1| Zea mays subsp. mays clone OAX70 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377703.1| Zea mays subsp. mays clone MAG450 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377702.1| Zea mays subsp. mays clone YUC7 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377700.1| Zea mays subsp. mays clone PUE32 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377697.1| Zea mays subsp. mays clone URGII anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377696.1| Zea mays subsp. mays clone MEX48 anonymous genomic RFLP marker Csu1171 Length = 470 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF369887.1| Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1156 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 188 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 247 ||||||||||||| | || || ||||| ||||||||||| || |||||||| || || | Sbjct: 852 caggtcttttgctagctttgatcccttttatagcttcagcataatctttagctccaaata 793 Query: 248 ccgcagaaccagcaacaagagcatt 272 | |||||||||||||| || ||||| Sbjct: 792 cagcagaaccagcaactagtgcatt 768
>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase mature form Length = 849 Score = 56.0 bits (28), Expect = 6e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 193 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 252 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 789 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 730 Query: 253 gaaccagc 260 |||||||| Sbjct: 729 gaaccagc 722
>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase transit form Length = 993 Score = 56.0 bits (28), Expect = 6e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 193 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 252 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 933 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 874 Query: 253 gaaccagc 260 |||||||| Sbjct: 873 gaaccagc 866
>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1230 Score = 56.0 bits (28), Expect = 6e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 193 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 252 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 898 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 839 Query: 253 gaaccagc 260 |||||||| Sbjct: 838 gaaccagc 831
>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate 3-epimerase mRNA, complete cds Length = 1198 Score = 56.0 bits (28), Expect = 6e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 193 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 252 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 890 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 831 Query: 253 gaaccagc 260 |||||||| Sbjct: 830 gaaccagc 823
>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1311 Score = 54.0 bits (27), Expect = 2e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 190 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 249 |||| ||||| || |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgcaggccttaattccttttatagcttctgcgtagtccttagctccaaataca 997 Query: 250 gcagaaccagcaacaagagcatt 272 || || ||||| || |||||||| Sbjct: 996 gctgatccagccactagagcatt 974
>gb|AY513906.1| Zea luxurians voucher 30919 RFLP marker csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AY513899.1| Zea mays subsp. parviglumis voucher PI384070 RFLP marker csu1171 Length = 469 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| ||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcagctacagctaggggtctttggctggtctttattcctttgatagct 118
>gb|AY513889.1| Zea mays subsp. mexicana voucher PI566677 RFLP marker csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AF377701.1| Zea mays subsp. mays clone GUA14 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 173 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 222 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, complete sequence Length = 120436 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 aaagaggagatgttacacagtg 147 |||||||||||||||||||||| Sbjct: 56375 aaagaggagatgttacacagtg 56396
>gb|AC110381.5| Mus musculus BAC clone RP24-198I16 from chromosome 10, complete sequence Length = 166554 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 atgatggtgatctctgtgata 62 ||||||||||||||||||||| Sbjct: 6279 atgatggtgatctctgtgata 6299
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Minus Query: 237 agccccgaaaaccgcagaaccagcaacaa 265 |||||||||||| || ||||||||||||| Sbjct: 3698462 agccccgaaaacggctgaaccagcaacaa 3698434 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gtgatacaacgtatggcttg 76 |||||||||||||||||||| Sbjct: 35475891 gtgatacaacgtatggcttg 35475910
>gb|AC159503.10| Mus musculus 10 BAC RP24-293I2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199258 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 atgatggtgatctctgtgata 62 ||||||||||||||||||||| Sbjct: 17097 atgatggtgatctctgtgata 17077
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Plus Query: 237 agccccgaaaaccgcagaaccagcaacaa 265 |||||||||||| || ||||||||||||| Sbjct: 82915 agccccgaaaacggctgaaccagcaacaa 82943
>gb|AC093532.2| Homo sapiens chromosome 5 clone RP11-407N4, complete sequence Length = 182564 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 194 ttttgctggtcttaattcctttgat 218 |||||||||||||| |||||||||| Sbjct: 99511 ttttgctggtcttacttcctttgat 99535
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 atctgatgatggtgatctctg 57 ||||||||||||||||||||| Sbjct: 20939 atctgatgatggtgatctctg 20959
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Minus Query: 237 agccccgaaaaccgcagaaccagcaacaa 265 |||||||||||| || ||||||||||||| Sbjct: 3698573 agccccgaaaacggctgaaccagcaacaa 3698545 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gtgatacaacgtatggcttg 76 |||||||||||||||||||| Sbjct: 35565963 gtgatacaacgtatggcttg 35565982
>gb|AC026108.29| Homo sapiens 12 BAC RP11-438H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 77790 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 194 ttttgctggtcttaattcctttgatagcttcag 226 ||||| || |||||||||||||||||| ||||| Sbjct: 16082 ttttgatgctcttaattcctttgatagattcag 16050 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 tcttaattcctttgatagcttcag 226 |||||||||||||||||| ||||| Sbjct: 15941 tcttaattcctttgatagattcag 15918
>emb|BX005405.11| Zebrafish DNA sequence from clone DKEY-19I22 in linkage group 20, complete sequence Length = 62329 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 gacaatggtaaaacaaaaaag 129 ||||||||||||||||||||| Sbjct: 4808 gacaatggtaaaacaaaaaag 4828
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13 Length = 80376 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 190 ggtcttttgctggtcttaattcctttgatagct 222 |||| |||||||| |||||||||||| |||||| Sbjct: 54662 ggtcgtttgctggccttaattccttttatagct 54694
>emb|BX470148.15| Zebrafish DNA sequence from clone CH211-198A16 in linkage group 20, complete sequence Length = 64300 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 gacaatggtaaaacaaaaaag 129 ||||||||||||||||||||| Sbjct: 59493 gacaatggtaaaacaaaaaag 59473
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 taaaacaaaaaagaggagat 136 |||||||||||||||||||| Sbjct: 50754 taaaacaaaaaagaggagat 50735
>gb|BT014306.1| Lycopersicon esculentum clone 133557F, mRNA sequence Length = 1257 Score = 40.1 bits (20), Expect = 3.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 188 caggtcttttgctggtcttaattcctttgatagcttcagc 227 |||| |||||||| ||||| || ||||| ||||||||||| Sbjct: 974 caggccttttgcttgtcttgatccctttaatagcttcagc 935
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cagaaccagcaacaagagca 270 |||||||||||||||||||| Sbjct: 5857 cagaaccagcaacaagagca 5876
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgcagaaccagcaacaagag 268 |||||||||||||||||||| Sbjct: 2961180 cgcagaaccagcaacaagag 2961199
>dbj|AK132225.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:3526403L10 product:unclassifiable, full insert sequence Length = 4356 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aggaaaattatttctttgtt 22 |||||||||||||||||||| Sbjct: 2343 aggaaaattatttctttgtt 2324
>gb|AC023394.11| Homo sapiens chromosome 18, clone RP11-389J22, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 aaaagaggagatgttacaca 144 |||||||||||||||||||| Sbjct: 78709 aaaagaggagatgttacaca 78728
>ref|XM_677933.1| PREDICTED: Danio rerio hypothetical protein LOC555433 (LOC555433), mRNA Length = 2460 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 atctgatgatggtgatctctgtga 60 ||||| |||||||||||||||||| Sbjct: 328 atctgctgatggtgatctctgtga 305
>dbj|AK038908.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230074D02 product:weakly similar to SUPER CYSTEINE RICH PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 2274 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aggaaaattatttctttgtt 22 |||||||||||||||||||| Sbjct: 690 aggaaaattatttctttgtt 671
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 taaaacaaaaaagaggagat 136 |||||||||||||||||||| Sbjct: 26537279 taaaacaaaaaagaggagat 26537260
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gaaaggcacctatgcaacgcaaac 105 ||||||||| |||||||||||||| Sbjct: 21557516 gaaaggcacatatgcaacgcaaac 21557493
>gb|AC011750.8| Homo sapiens BAC clone RP11-458C9 from 2, complete sequence Length = 139166 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaaggaaaattatttctttg 20 |||||||||||||||||||| Sbjct: 56372 gaaggaaaattatttctttg 56391
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gtgatacaacgtatggcttg 76 |||||||||||||||||||| Sbjct: 11735 gtgatacaacgtatggcttg 11716
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gtgatacaacgtatggcttg 76 |||||||||||||||||||| Sbjct: 8854 gtgatacaacgtatggcttg 8873
>dbj|AP003342.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0049O23 Length = 121038 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gaaaggcacctatgcaacgcaaac 105 ||||||||| |||||||||||||| Sbjct: 51055 gaaaggcacatatgcaacgcaaac 51032
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gaaaggcacctatgcaacgcaaac 105 ||||||||| |||||||||||||| Sbjct: 14069 gaaaggcacatatgcaacgcaaac 14046
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 atctgatgatggtgatctctgtga 60 ||||| |||||||||||||||||| Sbjct: 37242 atctgctgatggtgatctctgtga 37265
>emb|Z50098.1|STPPEPIMR S.tuberosum mRNA for pentose-5-phosphate-3-epimerase Length = 1055 Score = 40.1 bits (20), Expect = 3.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 188 caggtcttttgctggtcttaattcctttgatagcttcagc 227 |||| |||||||| ||||| || ||||| ||||||||||| Sbjct: 828 caggccttttgctcgtcttgatccctttaatagcttcagc 789
>emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chromosome 16, complete sequence Length = 229346 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aggaaaattatttctttgtt 22 |||||||||||||||||||| Sbjct: 93401 aggaaaattatttctttgtt 93420
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cagaaccagcaacaagagca 270 |||||||||||||||||||| Sbjct: 35845 cagaaccagcaacaagagca 35826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,604,110 Number of Sequences: 3902068 Number of extensions: 3604110 Number of successful extensions: 81159 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80908 Number of HSP's gapped (non-prelim): 251 length of query: 280 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 258 effective length of database: 17,147,199,772 effective search space: 4423977541176 effective search space used: 4423977541176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
