ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20j12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARGI1_ARATH (P46637) Arginase (EC 3.5.3.1) 60 2e-09
2ARGI2_ARATH (Q9ZPF5) Probable arginase (EC 3.5.3.1) 52 6e-07
3ARGI_SOYBN (O49046) Arginase (EC 3.5.3.1) 47 2e-05

>ARGI1_ARATH (P46637) Arginase (EC 3.5.3.1)|
          Length = 342

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -3

Query: 149 VVEFXPQRDTVDGMTAMVAAKLVRELSAKISK 54
           VVEF PQRDTVDGMTAMVAAKLVREL+AKISK
Sbjct: 311 VVEFNPQRDTVDGMTAMVAAKLVRELAAKISK 342



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>ARGI2_ARATH (Q9ZPF5) Probable arginase (EC 3.5.3.1)|
          Length = 344

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 149 VVEFXPQRDTVDGMTAMVAAKLVRELSAKISK 54
           VVE+ PQRDT D MTAMVAAK VREL+AK+SK
Sbjct: 313 VVEYNPQRDTADDMTAMVAAKFVRELAAKMSK 344



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>ARGI_SOYBN (O49046) Arginase (EC 3.5.3.1)|
          Length = 350

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -3

Query: 149 VVEFXPQRDTVDGMTAMVAAKLVRELSAKISK 54
           VVE+ PQR+  D MTAMVAAK VREL+AK+SK
Sbjct: 319 VVEYNPQREPPDRMTAMVAAKFVRELAAKMSK 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,230,011
Number of Sequences: 219361
Number of extensions: 243887
Number of successful extensions: 711
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 80,573,946
effective HSP length: 25
effective length of database: 75,089,921
effective search space used: 1802158104
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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