ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal20i20 |
|---|---|
| Clone Library Name | barley_pub |
>CYNS_ORYSA (Q9FWK4) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 168 Score = 251 bits (640), Expect = 1e-66 Identities = 122/142 (85%), Positives = 131/142 (92%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 FS+I E GLTNVYVAQLLRRQAQLKP+ AP LRAAVP LTD+L+ LMM PPFRSYHPDI Sbjct: 27 FSEIGEEAGLTNVYVAQLLRRQAQLKPETAPALRAAVPGLTDDLVALMMEPPFRSYHPDI 86 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 VHEPAIYRLNEAVMHFG SIKEIINE+FGDGIMSAIDFYCSVDK+QGADGK+RVVVTFDG Sbjct: 87 VHEPAIYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSVDKVQGADGKDRVVVTFDG 146 Query: 206 KYLPYTEQRSEHMMSRLTRNAS 141 KYLPY+EQRS+HMMSRLTR S Sbjct: 147 KYLPYSEQRSDHMMSRLTRKTS 168
>CYNS_ARATH (O22683) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 168 Score = 217 bits (552), Expect = 2e-56 Identities = 106/137 (77%), Positives = 120/137 (87%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 FS + AETGLTNVYVAQLLRRQAQLKPD PKL+ A+PALTDEL+ MM PP+RSY P++ Sbjct: 24 FSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTDELIGDMMSPPWRSYDPNL 83 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 + EP IYRLNEAVMHFG SIKEIINEDFGDGIMSAIDFYCSVDKI+G DG RVVVT DG Sbjct: 84 IQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDG 143 Query: 206 KYLPYTEQRSEHMMSRL 156 KYL ++EQR+E+M+SRL Sbjct: 144 KYLSHSEQRTENMVSRL 160
>CYNS_PSESM (Q885A6) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 155 Score = 87.8 bits (216), Expect = 2e-17 Identities = 46/125 (36%), Positives = 74/125 (59%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 ++ + +TGL+ VYV L Q L +A + + D ++EL P R + D+ Sbjct: 29 WASLAEDTGLSVVYVTAALLGQHPLPQAVAEVVAERLGLDRDAVVELQTIP-LRGHVEDV 87 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P IYR +E V +G ++K +++E FGDGI+SAI+F + K++ +G ER V+T DG Sbjct: 88 SSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIRKVEDPEGGERAVITLDG 147 Query: 206 KYLPY 192 K+LPY Sbjct: 148 KFLPY 152
>CYNS_SYNY3 (Q55367) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 149 Score = 85.9 bits (211), Expect = 7e-17 Identities = 49/125 (39%), Positives = 73/125 (58%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 F+D+ G V++A ++ RQA D A KL + L+D+L+ + P + P + Sbjct: 24 FADLEQLLGRDEVWIAAVIYRQASASVDEAEKLLHCL-GLSDDLVPELTAPSVKGLGPVV 82 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P IYR E + +G +KE+I+E FGDGIMSAIDF ++K G +RV VT +G Sbjct: 83 PTDPLIYRFYEIMQVYGMPMKEVIHEKFGDGIMSAIDFTLDIEKEADPKG-DRVKVTMNG 141 Query: 206 KYLPY 192 K+LPY Sbjct: 142 KFLPY 146
>CYNS_SYNPX (Q7U3E2) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 147 Score = 85.5 bits (210), Expect = 1e-16 Identities = 50/125 (40%), Positives = 67/125 (53%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 F+D+ A GL V+VA L QA + A KL + + L P S P I Sbjct: 21 FADLEAAIGLDEVWVASLFYGQATASKEEAEKLAGLLSLDAETTAALQEYPTKGSLEPVI 80 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P IYR E + +G +K++I E FGDGIMSAIDF VDK++ G +RV + G Sbjct: 81 PTDPLIYRFYEIMQVYGMPLKDVIQEHFGDGIMSAIDFTIDVDKVEDPKG-DRVKIVMCG 139 Query: 206 KYLPY 192 K+LPY Sbjct: 140 KFLPY 144
>CYNS_CHRVO (Q7NWU9) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 155 Score = 85.5 bits (210), Expect = 1e-16 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPD- 390 F DI TGL+ Y L Q L P+ A +L A L ++ + L+ P R P Sbjct: 28 FEDINQGTGLSLAYTTAALLGQHAL-PEAAARLVAERLELDEDAIALLQAIPLRGSIPGG 86 Query: 389 IVHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFD 210 + +P IYR E V +G ++K +++E FGDGI+SAI+F + K++ DG R V+T D Sbjct: 87 VPTDPTIYRFYEMVQIYGTTLKALVHEQFGDGIISAINFKLDIRKVEDPDGGHRAVITLD 146 Query: 209 GKYLP 195 GKYLP Sbjct: 147 GKYLP 151
>CYNS_ECO57 (P58704) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 156 Score = 83.6 bits (205), Expect = 4e-16 Identities = 47/124 (37%), Positives = 68/124 (54%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 F++I TGL +V L Q L D A ++ A + D +L L M P I Sbjct: 29 FAEIADGTGLAEAFVTAALLGQQALPADAARQVGAKLDLDEDAILLLQMIPLRGCIDDRI 88 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P +YR E + +G ++K +++E FGDGI+SAI+F V K+ +G ER V+T DG Sbjct: 89 PTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDG 148 Query: 206 KYLP 195 KYLP Sbjct: 149 KYLP 152
>CYNS_ECOLI (P00816) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 156 Score = 82.8 bits (203), Expect = 6e-16 Identities = 47/124 (37%), Positives = 67/124 (54%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 F++I TGL +V L Q L D A + A + D +L L M P I Sbjct: 29 FAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRI 88 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P +YR E + +G ++K +++E FGDGI+SAI+F V K+ +G ER V+T DG Sbjct: 89 PTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDG 148 Query: 206 KYLP 195 KYLP Sbjct: 149 KYLP 152
>CYNS_PSEAE (Q9I263) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 156 Score = 81.6 bits (200), Expect = 1e-15 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPD- 390 + D+ TGL +V L Q L P+ A + AA L D+ + L+ P R P Sbjct: 29 WQDLADGTGLALTFVTAALLGQHAL-PEAAARKVAAQLGLDDDAVLLLQSIPLRGSIPGG 87 Query: 389 IVHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFD 210 I +P IYR E + +G ++K +++E FGDGI+SAI+F + K++ +G R V+T D Sbjct: 88 IPSDPTIYRFYEMLQVYGSTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGSRAVITLD 147 Query: 209 GKYLP 195 GKYLP Sbjct: 148 GKYLP 152
>CYNS_SYNP7 (Q59948) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 146 Score = 81.3 bits (199), Expect = 2e-15 Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 4/129 (3%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVP---ALTDELLELMMRPPFRS-Y 399 F+++ G V++A + RQ+ P+ A KL A+ AL DEL PP + Sbjct: 20 FTELEQLLGRDEVWIASVFYRQSTASPEEAEKLLTALGLDLALADELTT----PPVKGCL 75 Query: 398 HPDIVHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVV 219 P I +P IYR E + +G +K++I E FGDGIMSAIDF VDK++ G +RV V Sbjct: 76 EPVIPTDPLIYRFYEIMQVYGLPLKDVIQEKFGDGIMSAIDFTLDVDKVEDPKG-DRVKV 134 Query: 218 TFDGKYLPY 192 T GK+L Y Sbjct: 135 TMCGKFLAY 143
>CYNS_PROMP (Q7V2U0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 147 Score = 81.3 bits (199), Expect = 2e-15 Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRS-YHPD 390 F D+ V+VA L QA + A L AA+ LT +L E + PP + P Sbjct: 21 FEDLGNLINRDEVWVASLFYGQATASEEEATSLIAALD-LTSDLKEDLSTPPVKGCLDPV 79 Query: 389 IVHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFD 210 I +P IYR E + +G +K++I E FGDGIMSAIDF VDK++ G +RV+V Sbjct: 80 IPTDPLIYRFYEIMQVYGLPMKDVIQEKFGDGIMSAIDFSIEVDKVEDPKG-DRVLVKMC 138 Query: 209 GKYLPY 192 GK+LPY Sbjct: 139 GKFLPY 144
>CYNS_ANASP (P58703) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 146 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/125 (39%), Positives = 66/125 (52%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 F+D+ A G V +A L RQA + A KL L ++ + P + P + Sbjct: 21 FADLEATLGRDEVCIAALFYRQASASEEEA-KLLVEALGLDSSYIKHLTEYPVKGLGPVV 79 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P IYR E + +G IKE+I E FGDGIMSAIDF V+K G +RV +T G Sbjct: 80 PTDPLIYRFYEIMQVYGFPIKEVIQEKFGDGIMSAIDFTLDVEKEADPKG-DRVKITMSG 138 Query: 206 KYLPY 192 K+LPY Sbjct: 139 KFLPY 143
>CYNS_PHOLL (Q7NA33) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 156 Score = 80.1 bits (196), Expect = 4e-15 Identities = 47/124 (37%), Positives = 63/124 (50%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 F DI TGL+ +V L Q L D A + + D L P S I Sbjct: 29 FEDIAQGTGLSLAFVTAALLGQHPLPADAARVVVDRLELEEDAFFLLQTIPVRGSIPGGI 88 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P IYR E V +G ++K +++E FGDGI+SAIDF + K+ +G R V+T DG Sbjct: 89 PTDPTIYRFYEMVQVYGSTLKALVHEQFGDGIISAIDFKLDIKKVDDPNGGSRAVITLDG 148 Query: 206 KYLP 195 KYLP Sbjct: 149 KYLP 152
>CYNS_AQUAE (O66587) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 149 Score = 75.9 bits (185), Expect = 8e-14 Identities = 44/125 (35%), Positives = 69/125 (55%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPALTDELLELMMRPPFRSYHPDI 387 + D+ + G + VY A L AQ + + + EL EL P P Sbjct: 23 WEDVSRKLGKSPVYCAMLFYGYAQADDEEVKAVAELLNLEEKELAELKDAPYREPQQPVP 82 Query: 386 VHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVTFDG 207 +P +YRL E V+ +G ++K++ +E FGDGIMSAID ++K++ +G ER+V+TF+G Sbjct: 83 PTDPFVYRLYEVVILYGPALKDVAHEMFGDGIMSAIDMSVELEKVE-QEGAERMVLTFNG 141 Query: 206 KYLPY 192 K+L Y Sbjct: 142 KWLKY 146
>CYNS_MYCPA (P61192) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 155 Score = 75.1 bits (183), Expect = 1e-13 Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 1/93 (1%) Frame = -2 Query: 449 LTDELLELMMRPPFRSYHPDIVH-EPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDF 273 L + + ++ PP R P V +P IYR EA+ +G ++KE+I E FGDGIMSAI+F Sbjct: 63 LDESAVPVLAAPPMRGGLPTAVPTDPTIYRFYEALQVYGGALKEVIAEQFGDGIMSAINF 122 Query: 272 YCSVDKIQGADGKERVVVTFDGKYLPYTEQRSE 174 + K G +RVVVTFDGK+LPY SE Sbjct: 123 SVDLQKKPHPSG-DRVVVTFDGKFLPYQWVSSE 154
>CYNS_SULTO (Q972W5) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 148 Score = 68.9 bits (167), Expect = 9e-12 Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 3/130 (2%) Frame = -2 Query: 566 FSDIXAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPA---LTDELLELMMRPPFRSYH 396 + +I G VY A LL AQ + A K+ + L L+ MR P + + Sbjct: 22 WEEIGKYLGRDKVYAAMLLYGYAQATEEEADKIITLLDLPKELKPAFLDAPMRTPAQPWP 81 Query: 395 PDIVHEPAIYRLNEAVMHFG*SIKEIINEDFGDGIMSAIDFYCSVDKIQGADGKERVVVT 216 P +P IYRL E V+ +G IK++ +E FGDGIMS ID VDK+ + R+V+T Sbjct: 82 PT---DPFIYRLYEGVLLYGPVIKDVAHELFGDGIMSMIDVKIYVDKVI-ENNYPRMVLT 137 Query: 215 FDGKYLPYTE 186 F+GK+L Y++ Sbjct: 138 FNGKWLYYSK 147
>ERCC2_HUMAN (P18074) TFIIH basal transcription factor complex helicase subunit| (EC 3.6.1.-) (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D complementing protein) (CXPD) (DNA excision repair protein ERCC-2) Length = 760 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 9/82 (10%) Frame = +2 Query: 38 KSLIHFFFKSKVE---------SGNTTICYHMNIHPLRSTSHLKMHCGSILTSYVQISAR 190 + L++F+ K + E S +C H + PLR + C S+ SYV Sbjct: 88 RKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYV----- 142 Query: 191 CKADTSHQM*PPHVLFHQPLES 256 +A H PH F++ ++ Sbjct: 143 -RAQYQHDTSLPHCRFYEEFDA 163
>TRPE_PYRKO (Q9YGB3) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 433 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +3 Query: 354 FIQSVYGGLVHDVRVVGPERRPHHELQELVGERRDGRPELGRHVG 488 F+ V G D V ER P L+ L+GER +GR +G VG Sbjct: 48 FVVEVGEGTEIDGERVSDERNPLRALKGLMGERVEGRRFMGGFVG 92
>HSP90_CAEBR (Q61W58) Heat shock protein 90 (Abnormal dauer formation protein| 21) Length = 706 Score = 29.6 bits (65), Expect = 6.2 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -2 Query: 281 IDFYCSVDKIQGADGKERVVVTFDGKYLPYTEQRSE 174 ID YC V +++ DGK+ V VT +G LP TE+ + Sbjct: 499 IDEYC-VQQLKEYDGKKLVSVTKEGLELPETEEEKK 533
>HSP90_CAEEL (Q18688) Heat shock protein 90 (Abnormal dauer formation protein| 21) Length = 702 Score = 29.6 bits (65), Expect = 6.2 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -2 Query: 281 IDFYCSVDKIQGADGKERVVVTFDGKYLPYTEQRSE 174 ID YC V +++ DGK+ V VT +G LP TE+ + Sbjct: 495 IDEYC-VQQLKEYDGKKLVSVTKEGLELPETEEEKK 529 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,791,731 Number of Sequences: 219361 Number of extensions: 1533362 Number of successful extensions: 4283 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4184 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4273 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
