ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20i10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
2dbj|AK121798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 2e-89
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 170 3e-39
4gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
8dbj|AK069156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
9gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
10dbj|AK099998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
11ref|NM_180450.2| Arabidopsis thaliana unknown protein AT5G06530 ... 52 0.002
12ref|NM_001036766.1| Arabidopsis thaliana unknown protein AT5G065... 52 0.002
13ref|NM_120736.2| Arabidopsis thaliana ATPase, coupled to transme... 52 0.002
14gb|AY114068.1| Arabidopsis thaliana putative ABC transporter pro... 52 0.002
15gb|AY059787.1| Arabidopsis thaliana putative ABC transporter pro... 52 0.002
16gb|AF389289.1|AF389289 Arabidopsis thaliana AT5g06530/F15M7_6 mR... 52 0.002
17dbj|AP002543.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
18gb|BT002271.1| Arabidopsis thaliana At5g06530/F15M7_6 mRNA, comp... 52 0.002
19gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.7
20ref|NM_211660.1| Eremothecium gossypii AGL068Wp (AGL068W), mRNA 42 1.7
21gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 42 1.7
22gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
23gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 6.8
24gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C2... 40 6.8
25gb|AC019155.4| Homo sapiens BAC clone RP11-3B12 from 7, complete... 40 6.8
26dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.8
27gb|AC084838.7| Homo sapiens chromosome 8, clone CTD-2023J5, comp... 40 6.8
28dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
29gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complet... 40 6.8
30emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 6.8
31dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8 
>dbj|AK066035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047J21, full
            insert sequence
          Length = 2791

 Score =  353 bits (178), Expect = 4e-94
 Identities = 270/302 (89%)
 Strand = Plus / Minus

                                                                        
Query: 199  acccggtacccgatgatcatcgcgaccagggctccgacctctgtcacgccgttatccaga 258
            |||| ||| |||||||||||||||||||| ||| | || |||||||||||||| || |||
Sbjct: 2501 accctgtagccgatgatcatcgcgaccagagctacaacttctgtcacgccgttgtcaaga 2442

                                                                        
Query: 259  ggtacggaggtcatcaggatgtccggcacggggtcgtactgcaccttcagcagcagcctg 318
            |||| ||   | ||||| |||||||| || || |  || |||||||||||||| ||||||
Sbjct: 2441 ggtatggcattgatcagaatgtccgggacaggatgatattgcaccttcagcagtagcctg 2382

                                                                        
Query: 319  tacgtgtggtagttgaaggacaggtaccggagccaggatatgaatggtggaactctcttt 378
            ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2381 tacgtgtggtagttgaatgacaggtagcggagccaggatatgaatggtggaactctcttt 2322

                                                                        
Query: 379  acaaagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgcc 438
            |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 2321 acaaagaaccctcctgctagcatgaatgtcatgactgtaactgaagctagagttgttgcc 2262

                                                                        
Query: 439  ttcttgatatccaagagggtagctccaattgccagncctagnccctgagcannaatgatg 498
            |||||||||||||||||| |||||||||||||||  ||||  |||||||||  |||||||
Sbjct: 2261 ttcttgatatccaagaggctagctccaattgccaatcctaatccctgagcagcaatgatg 2202

              
Query: 499  ct 500
            ||
Sbjct: 2201 ct 2200
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>dbj|AK121798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096H22, full
            insert sequence
          Length = 6502

 Score =  337 bits (170), Expect = 2e-89
 Identities = 248/274 (90%)
 Strand = Plus / Minus

                                                                        
Query: 199  acccggtacccgatgatcatcgcgaccagggctccgacctctgtcacgccgttatccaga 258
            |||| ||| |||||||||||||||||||| ||| | || |||||||||||||| || |||
Sbjct: 6209 accctgtagccgatgatcatcgcgaccagagctacaacttctgtcacgccgttgtcaaga 6150

                                                                        
Query: 259  ggtacggaggtcatcaggatgtccggcacggggtcgtactgcaccttcagcagcagcctg 318
            |||| ||   | ||||| |||||||| || || |  || |||||||||||||| ||||||
Sbjct: 6149 ggtatggcattgatcagaatgtccgggacaggatgatattgcaccttcagcagtagcctg 6090

                                                                        
Query: 319  tacgtgtggtagttgaaggacaggtaccggagccaggatatgaatggtggaactctcttt 378
            ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6089 tacgtgtggtagttgaatgacaggtagcggagccaggatatgaatggtggaactctcttt 6030

                                                                        
Query: 379  acaaagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgcc 438
            |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 6029 acaaagaaccctcctgctagcatgaatgtcatgactgtaactgaagctagagttgttgcc 5970

                                              
Query: 439  ttcttgatatccaagagggtagctccaattgcca 472
            |||||||||||||||||| |||||||||||||||
Sbjct: 5969 ttcttgatatccaagaggctagctccaattgcca 5936
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  170 bits (86), Expect = 3e-39
 Identities = 95/98 (96%)
 Strand = Plus / Plus

                                                                           
Query: 375     ctttacaaagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagt 434
               |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 3058281 ctttacaaagaaccctcctgctagcatgaatgtcatgactgtaactgaagctagagttgt 3058340

                                                     
Query: 435     tgccttcttgatatccaagagggtagctccaattgcca 472
               |||||||||||||||||||||| |||||||||||||||
Sbjct: 3058341 tgccttcttgatatccaagaggctagctccaattgcca 3058378



 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Plus

                                                                           
Query: 199     acccggtacccgatgatcatcgcgaccagggctccgacctctgtcacgccgttatccaga 258
               |||| ||| |||||||||||||||||||| ||| | || |||||||||||||| || |||
Sbjct: 3057995 accctgtagccgatgatcatcgcgaccagagctacaacttctgtcacgccgttgtcaaga 3058054

                                                                           
Query: 259     ggtacggaggtcatcaggatgtccggcacggggtcgtactgcaccttcagcagcagcctg 318
               |||| ||   | ||||| |||||||| || || |  || |||||||||||||| ||||||
Sbjct: 3058055 ggtatggcattgatcagaatgtccgggacaggatgatattgcaccttcagcagtagcctg 3058114

                                                                         
Query: 319     tacgtgtggtagttgaaggacaggtaccggagccaggatatgaatggtggaactctct 376
               ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 3058115 tacgtgtggtagttgaatgacaggtagcggagccaggatatgaatggtggaactctct 3058172



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 88/106 (83%), Gaps = 8/106 (7%)
 Strand = Plus / Plus

                                                                           
Query: 375     ctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagcta 427
               |||||||||||| |||||||||||||||||||       |||||||||| ||||||| ||
Sbjct: 4842882 ctttacaaagaatcctcctgctagcatgaatgccatgactcatgactgtaactgaaggta 4842941

                                                             
Query: 428     gagtagttgccttcttg-atatccaagagggtagctccaattgcca 472
                |||  |||| || ||  || |||||||||||||||||||||||||
Sbjct: 4842942 cagtttttgcatttttttatgtccaagagggtagctccaattgcca 4842987
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>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0011L14, complete sequence
          Length = 117974

 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Minus

                                                                         
Query: 199   acccggtacccgatgatcatcgcgaccagggctccgacctctgtcacgccgttatccaga 258
             |||| ||| |||||||||||||||||||| ||| | || |||||||||||||| || |||
Sbjct: 38266 accctgtagccgatgatcatcgcgaccagagctacaacttctgtcacgccgttgtcaaga 38207

                                                                         
Query: 259   ggtacggaggtcatcaggatgtccggcacggggtcgtactgcaccttcagcagcagcctg 318
             |||| ||   | ||||| |||||||| || || |  || |||||||||||||| ||||||
Sbjct: 38206 ggtatggcattgatcagaatgtccgggacaggatgatattgcaccttcagcagtagcctg 38147

                                                                       
Query: 319   tacgtgtggtagttgaaggacaggtaccggagccaggatatgaatggtggaactctct 376
             ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 38146 tacgtgtggtagttgaatgacaggtagcggagccaggatatgaatggtggaactctct 38089



 Score =  170 bits (86), Expect = 3e-39
 Identities = 95/98 (96%)
 Strand = Plus / Minus

                                                                         
Query: 375   ctttacaaagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagt 434
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 37980 ctttacaaagaaccctcctgctagcatgaatgtcatgactgtaactgaagctagagttgt 37921

                                                   
Query: 435   tgccttcttgatatccaagagggtagctccaattgcca 472
             |||||||||||||||||||||| |||||||||||||||
Sbjct: 37920 tgccttcttgatatccaagaggctagctccaattgcca 37883
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  170 bits (86), Expect = 3e-39
 Identities = 95/98 (96%)
 Strand = Plus / Plus

                                                                           
Query: 375     ctttacaaagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagt 434
               |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 3058392 ctttacaaagaaccctcctgctagcatgaatgtcatgactgtaactgaagctagagttgt 3058451

                                                     
Query: 435     tgccttcttgatatccaagagggtagctccaattgcca 472
               |||||||||||||||||||||| |||||||||||||||
Sbjct: 3058452 tgccttcttgatatccaagaggctagctccaattgcca 3058489



 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Plus

                                                                           
Query: 199     acccggtacccgatgatcatcgcgaccagggctccgacctctgtcacgccgttatccaga 258
               |||| ||| |||||||||||||||||||| ||| | || |||||||||||||| || |||
Sbjct: 3058106 accctgtagccgatgatcatcgcgaccagagctacaacttctgtcacgccgttgtcaaga 3058165

                                                                           
Query: 259     ggtacggaggtcatcaggatgtccggcacggggtcgtactgcaccttcagcagcagcctg 318
               |||| ||   | ||||| |||||||| || || |  || |||||||||||||| ||||||
Sbjct: 3058166 ggtatggcattgatcagaatgtccgggacaggatgatattgcaccttcagcagtagcctg 3058225

                                                                         
Query: 319     tacgtgtggtagttgaaggacaggtaccggagccaggatatgaatggtggaactctct 376
               ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 3058226 tacgtgtggtagttgaatgacaggtagcggagccaggatatgaatggtggaactctct 3058283



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 88/106 (83%), Gaps = 8/106 (7%)
 Strand = Plus / Plus

                                                                           
Query: 375     ctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagcta 427
               |||||||||||| |||||||||||||||||||       |||||||||| ||||||| ||
Sbjct: 4842097 ctttacaaagaatcctcctgctagcatgaatgccatgactcatgactgtaactgaaggta 4842156

                                                             
Query: 428     gagtagttgccttcttg-atatccaagagggtagctccaattgcca 472
                |||  |||| || ||  || |||||||||||||||||||||||||
Sbjct: 4842157 cagtttttgcatttttttatgtccaagagggtagctccaattgcca 4842202
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>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08,
              complete sequence
          Length = 144781

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/107 (84%), Gaps = 9/107 (8%)
 Strand = Plus / Plus

                                                                          
Query: 375    ctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagcta 427
              |||||||||||| |||||||||||||||||||       |||||||||| ||||||| ||
Sbjct: 109333 ctttacaaagaatcctcctgctagcatgaatgccatgattcatgactgtaactgaaggta 109392

                                                             
Query: 428    gagtagttgcc--ttcttgatatccaagagggtagctccaattgcca 472
               |||  |||||  || || ||||||||||||||||||||||||||||
Sbjct: 109393 cagtttttgccttttttttatatccaagagggtagctccaattgcca 109439
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/107 (84%), Gaps = 9/107 (8%)
 Strand = Plus / Plus

                                                                           
Query: 375     ctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagcta 427
               |||||||||||| |||||||||||||||||||       |||||||||| ||||||| ||
Sbjct: 4487709 ctttacaaagaatcctcctgctagcatgaatgccatgattcatgactgtaactgaaggta 4487768

                                                              
Query: 428     gagtagttgcc--ttcttgatatccaagagggtagctccaattgcca 472
                |||  |||||  || || ||||||||||||||||||||||||||||
Sbjct: 4487769 cagtttttgccttttttttatatccaagagggtagctccaattgcca 4487815
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>dbj|AK069156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007L22, full
            insert sequence
          Length = 2429

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 89/107 (83%), Gaps = 8/107 (7%)
 Strand = Plus / Minus

                                                                        
Query: 374  tctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagct 426
            ||||||||||||| |||||||||||||||||||       |||||||||| ||||||| |
Sbjct: 1766 tctttacaaagaatcctcctgctagcatgaatgccatgactcatgactgtaactgaaggt 1707

                                                           
Query: 427  agagtagttgccttcttg-atatccaagagggtagctccaattgcca 472
            | |||  |||| || ||  || |||||||||||||||||||||||||
Sbjct: 1706 acagtttttgcatttttttatgtccaagagggtagctccaattgcca 1660
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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 88/106 (83%), Gaps = 8/106 (7%)
 Strand = Plus / Minus

                                                                          
Query: 375    ctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagcta 427
              |||||||||||| |||||||||||||||||||       |||||||||| ||||||| ||
Sbjct: 152665 ctttacaaagaatcctcctgctagcatgaatgccatgactcatgactgtaactgaaggta 152606

                                                            
Query: 428    gagtagttgccttcttg-atatccaagagggtagctccaattgcca 472
               |||  |||| || ||  || |||||||||||||||||||||||||
Sbjct: 152605 cagtttttgcatttttttatgtccaagagggtagctccaattgcca 152560
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>dbj|AK099998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C19, full
            insert sequence
          Length = 2093

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 88/106 (83%), Gaps = 8/106 (7%)
 Strand = Plus / Minus

                                                                        
Query: 375  ctttacaaagaaccctcctgctagcatgaatg-------tcatgactgtgactgaagcta 427
            |||||||||||| |||||||||||||||||||       |||||||||| ||||||| ||
Sbjct: 1646 ctttacaaagaatcctcctgctagcatgaatgccatgactcatgactgtaactgaaggta 1587

                                                          
Query: 428  gagtagttgccttcttg-atatccaagagggtagctccaattgcca 472
             |||  |||| || ||  || |||||||||||||||||||||||||
Sbjct: 1586 cagtttttgcatttttttatgtccaagagggtagctccaattgcca 1541
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>ref|NM_180450.2| Arabidopsis thaliana unknown protein AT5G06530 transcript variant
            AT5G06530.2 mRNA, complete cds
          Length = 2788

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 2252 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 2193

              
Query: 442  tt 443
            ||
Sbjct: 2192 tt 2191
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>ref|NM_001036766.1| Arabidopsis thaliana unknown protein AT5G06530 transcript variant
            AT5G06530.3 mRNA, complete cds
          Length = 2882

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 2252 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 2193

              
Query: 442  tt 443
            ||
Sbjct: 2192 tt 2191
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>ref|NM_120736.2| Arabidopsis thaliana ATPase, coupled to transmembrane movement of
            substances AT5G06530 transcript variant AT5G06530.1 mRNA,
            complete cds
          Length = 2684

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 2148 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 2089

              
Query: 442  tt 443
            ||
Sbjct: 2088 tt 2087
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>gb|AY114068.1| Arabidopsis thaliana putative ABC transporter protein (At5g06530)
            mRNA, complete cds
          Length = 2287

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 2033 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 1974

              
Query: 442  tt 443
            ||
Sbjct: 1973 tt 1972
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>gb|AY059787.1| Arabidopsis thaliana putative ABC transporter protein (At5g06530)
            mRNA, complete cds
          Length = 2572

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 2142 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 2083

              
Query: 442  tt 443
            ||
Sbjct: 2082 tt 2081
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>gb|AF389289.1|AF389289 Arabidopsis thaliana AT5g06530/F15M7_6 mRNA, complete cds
          Length = 2582

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 2146 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 2087

              
Query: 442  tt 443
            ||
Sbjct: 2086 tt 2085
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>dbj|AP002543.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F15M7
          Length = 74350

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 382   aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
             ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 14980 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 15039

               
Query: 442   tt 443
             ||
Sbjct: 15040 tt 15041
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>gb|BT002271.1| Arabidopsis thaliana At5g06530/F15M7_6 mRNA, complete cds
          Length = 1377

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  aagaaccctcctgctagcatgaatgtcatgactgtgactgaagctagagtagttgccttc 441
            ||||| ||||| || ||||||||||||||||| || |||||||| | ||| || ||||||
Sbjct: 1154 aagaatcctccggcgagcatgaatgtcatgacagttactgaagccaaagtcgtagccttc 1095

              
Query: 442  tt 443
            ||
Sbjct: 1094 tt 1093
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 289    gggtcgtactgcaccttcagcagcagcctgtac 321
              ||||||| |||||||||||||| | ||||||||
Sbjct: 582530 gggtcgtgctgcaccttcagcaacggcctgtac 582498
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>ref|NM_211660.1| Eremothecium gossypii AGL068Wp (AGL068W), mRNA
          Length = 1866

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 289  gggtcgtactgcaccttcagcagcagcctgtac 321
            ||||||| |||||||||||||| | ||||||||
Sbjct: 1841 gggtcgtgctgcaccttcagcaacggcctgtac 1809
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>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 140    ttcacttgccctgctagccgttcga 164
              ||||||||||||||||||| |||||
Sbjct: 974087 ttcacttgccctgctagcccttcga 974063
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   tgtgactgaagctagagtag 433
             ||||||||||||||||||||
Sbjct: 89661 tgtgactgaagctagagtag 89680
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 295     tactgcaccttcagcagcag 314
               ||||||||||||||||||||
Sbjct: 1111838 tactgcaccttcagcagcag 1111857
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>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tactgcaccttcagcagcag 314
             ||||||||||||||||||||
Sbjct: 35739 tactgcaccttcagcagcag 35720
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>gb|AC019155.4| Homo sapiens BAC clone RP11-3B12 from 7, complete sequence
          Length = 176130

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    acttccctacatgcaatcaa 93
             ||||||||||||||||||||
Sbjct: 17868 acttccctacatgcaatcaa 17849
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 367     ggaactctctttacaaagaa 386
               ||||||||||||||||||||
Sbjct: 5403635 ggaactctctttacaaagaa 5403616
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>gb|AC084838.7| Homo sapiens chromosome 8, clone CTD-2023J5, complete sequence
          Length = 183693

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    agcaaagaatagaacagtgg 31
             ||||||||||||||||||||
Sbjct: 71754 agcaaagaatagaacagtgg 71735
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 414      tgtgactgaagctagagtag 433
                ||||||||||||||||||||
Sbjct: 19158641 tgtgactgaagctagagtag 19158660
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>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence
          Length = 208477

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     agcaaagaatagaacagtgg 31
              ||||||||||||||||||||
Sbjct: 139151 agcaaagaatagaacagtgg 139170
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    agcaaagaatagaacagtgg 31
             ||||||||||||||||||||
Sbjct: 27812 agcaaagaatagaacagtgg 27831
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>dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34C12, TM0361,
             complete sequence
          Length = 108947

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 317   tgtacgtgtggtagttgaaggacaggta 344
             ||||||||||||||||||| || |||||
Sbjct: 68295 tgtacgtgtggtagttgaaagataggta 68268


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,179,992
Number of Sequences: 3902068
Number of extensions: 3179992
Number of successful extensions: 54750
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54635
Number of HSP's gapped (non-prelim): 110
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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