| Clone Name | rbaal20i06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3) | 28 | 4.7 | 2 | TLN1_CHICK (P54939) Talin-1 | 28 | 8.1 | 3 | GLDA_ECOLI (P0A9S5) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH) | 28 | 8.1 | 4 | GLDA_ECOL6 (P0A9S6) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH) | 28 | 8.1 |
|---|
>PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 420 Score = 28.5 bits (62), Expect = 4.7 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +3 Query: 24 HVRNKRQDRRIDXNATLKLGRLKSSLVLRALHFGLERL---NDRGEVLVGEAQR-FGNLV 191 H+ NKR R+D N LK G++K ++ ++++ N +G VL+ R GN V Sbjct: 14 HIENKRVLMRVDFNVPLKEGKVKDPTRIQGSVPSIKKILEQNPKGLVLMSHLGRPDGNRV 73 Query: 192 Q 194 + Sbjct: 74 E 74
>TLN1_CHICK (P54939) Talin-1| Length = 2541 Score = 27.7 bits (60), Expect = 8.1 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Frame = -3 Query: 252 LALAEXXXXAHSPXCSCKRAVQGCQIVGPRRPGLLRGH*GAQGQ----SAELAAL 100 +A A+ ++ + ++ VQ C++V + P L++G G+Q Q SA+LA + Sbjct: 932 IAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALI 986
>GLDA_ECOLI (P0A9S5) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH)| Length = 367 Score = 27.7 bits (60), Expect = 8.1 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = +3 Query: 15 AHMHVRNKRQDRRIDXNATLKLGRLKSS--LVLRALHFGLERLNDRGEVLVGEAQRFGNL 188 A HV +R I+ N L +S A+H GL + D GE FG L Sbjct: 221 AEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTL 280 Query: 189 VQLV 200 QLV Sbjct: 281 TQLV 284
>GLDA_ECOL6 (P0A9S6) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH)| Length = 367 Score = 27.7 bits (60), Expect = 8.1 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = +3 Query: 15 AHMHVRNKRQDRRIDXNATLKLGRLKSS--LVLRALHFGLERLNDRGEVLVGEAQRFGNL 188 A HV +R I+ N L +S A+H GL + D GE FG L Sbjct: 221 AEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTL 280 Query: 189 VQLV 200 QLV Sbjct: 281 TQLV 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,078,644 Number of Sequences: 219361 Number of extensions: 400025 Number of successful extensions: 985 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 977 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 985 length of database: 80,573,946 effective HSP length: 62 effective length of database: 66,973,564 effective search space used: 1607365536 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)