| Clone Name | rbaal20h24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 850 bits (429), Expect = 0.0 Identities = 492/512 (96%), Gaps = 2/512 (0%) Strand = Plus / Minus Query: 67 aggcttggttg--taggaagaatccatctcgtggaccacgagtctagtggtggtgacccg 124 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 2032 aggcttggttggttaggaagaatccatttcgtggaccacgagtctagtggtggtgacctg 1973 Query: 125 aattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgg 184 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1972 aattcccgtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgg 1913 Query: 185 gtacactcgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatg 244 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1912 gtacactcgtgatgttgccgtcaacctcccacccatcgcaaagctttcaacgatcgaatg 1853 Query: 245 atccaccagcaccctcactgacagctcttcggcatcaagcaccggcacggtattgcctac 304 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1852 atccactagcaccctcactgacagctcttcgccatcaagcaccggcacggtattgcctac 1793 Query: 305 aaccctcttgacaatgtcgttggcatgagatgagcgcgtctcatcatggcagaagtgtgt 364 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1792 aaccctcttgacaatgtcgttggcatgagatgagcgcatctcatcgtggcagaagtgtgt 1733 Query: 365 atgcaagccaccgtcaaggcccctggcgacatagaagtagacggcggtgcgctccgcgtc 424 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1732 atgcaagccaccgtcgaggcccctggcgacatagaagtagacggcggtgcgctccgcgtc 1673 Query: 425 acctccatggcgcctggcatcggcaagcacaaggaggccaaatgggccgagcatgccccg 484 |||||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 1672 acctccatagcgcctggcgtcagcaagcacaaggaggccaaatgggccgagcttgccccg 1613 Query: 485 ccctgtggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttggaggcggc 544 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1612 ccctgcggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttggaggcggc 1553 Query: 545 gatgtctagctggtcaaggcggaaggaggcct 576 ||| ||||||||||| |||||||||||||||| Sbjct: 1552 gatatctagctggtcgaggcggaaggaggcct 1521
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 339 bits (171), Expect = 6e-90 Identities = 446/537 (83%), Gaps = 3/537 (0%) Strand = Plus / Minus Query: 43 cattttgtttttacagt---gccatgtaggcttggttgtaggaagaatccatctcgtgga 99 |||||| |||||||||| | ||||||||| || |||||||| || ||||||||||||| Sbjct: 2073 cattttctttttacagtgaggtcatgtaggcctgattgtaggaggagtccatctcgtgga 2014 Query: 100 ccacgagtctagtggtggtgacccgaattccagtggcattgttgaagaggtacaccccag 159 | ||||| || ||| | ||||||| | ||||| |||||||||||||| ||||||| Sbjct: 2013 cgacgagcctcgtgacgttgacccgggcgctggtggcgttgttgaagaggtagaccccag 1954 Query: 160 cgttggcgtagatggcctccgtcgggtacactcgtgatgttgcggtcaacctaccaccca 219 ||||||| |||||||||||||| |||||||| ||||| || || |||||||| || |||| Sbjct: 1953 cgttggcatagatggcctccgttgggtacacccgtgacgtcgccgtcaacctcccgccca 1894 Query: 220 tcgcaaagctctcaacgatcgaatgatccaccagcaccctcactgacagctcttcggcat 279 | |||||||||||||| || ||||| ||||| |||||||||||||| | ||| ||| ||| Sbjct: 1893 ttgcaaagctctcaacaatggaatggtccactagcaccctcactgaaaactcctcgccat 1834 Query: 280 caagcaccggcacggtattgcctacaaccctcttgacaatgtcgttggcatgagatgagc 339 | ||||| || || |||||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 1833 cgagcacggggacaatattgcctacgaccttcttgacaatatcgttggcatgagatgagc 1774 Query: 340 gcgtctcatcatggcagaagtgtgtatgcaagccaccgtcaaggcccctggcgacataga 399 ||||||| || ||||| |||||||| ||||||||||||| ||||| |||||||| |||| Sbjct: 1773 gcgtctcgtcgtggcaaaagtgtgtgcgcaagccaccgtcgaggcctctggcgacgtaga 1714 Query: 400 agtagacggcggtgcgctccgcgtcacctccatggcgcctggcatcggcaagcacaagga 459 |||| ||| |||| |||||| ||| || | ||| |||| ||||| ||||||||||||| Sbjct: 1713 agtacacgccggtccgctccatgtcgccactgtggtgcctagcatcagcaagcacaagga 1654 Query: 460 ggccaaatgggccgagcatgccccgccctgtggcgccaccgctggtgctgcaattgtagc 519 |||| || || ||||| | ||||| || || | |||||||||||||||||| ||||||| Sbjct: 1653 ggccgaagggaccgagtgtaccccgtccagtcgtgccaccgctggtgctgcagttgtagc 1594 Query: 520 cgacatcggcctcgttggaggcggcgatgtctagctggtcaaggcggaaggaggcct 576 | ||||| ||||| |||| ||||| | ||| ||| ||||||| || || ||||||| Sbjct: 1593 caacatccgcctccttggcagcggcaacgtcgagcgggtcaagacgaaatgaggcct 1537
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 240 bits (121), Expect = 4e-60 Identities = 418/517 (80%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtg 119 ||||||||||| || |||||||| | |||||||| || || |||| ||||||| |||| Sbjct: 2157 gccatgtaggcctgattgtaggagaagtccatctcatgtactgcgaggctagtggcggtg 2098 Query: 120 acccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcctcc 179 || || || |||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 2097 acgcgggcaccggtggcattgttgaagaggtacaccccggtgttggcgtagatggcctcg 2038 Query: 180 gtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatc 239 || ||||||||||| || || | ||| |||| |||||| ||||||||||| || || Sbjct: 2037 gttgggtacactcgcgaagtcactgtcgacctcccaccctgtgcaaagctctcgacaatg 1978 Query: 240 gaatgatccaccagcaccctcactgacagctcttcggcatcaagcaccggcacggtattg 299 || || |||||||| || || | || || | ||| ||||||||||||||||| || Sbjct: 1977 gagtggtccaccagtactctgatggatagtgcctcgccatcaagcaccggcacgacgtta 1918 Query: 300 cctacaaccctcttgacaatgtcgttggcatgagatgagcgcgtctcatcatggcagaag 359 || ||||||||||| ||||||||||||||| | || || || | |||||||||||||||| Sbjct: 1917 ccgacaaccctcttcacaatgtcgttggcacgcgacgaccgtgactcatcatggcagaag 1858 Query: 360 tgtgtatgcaagccaccgtcaaggcccctggcgacatagaagtagacggcggtgcgctcc 419 || || ||| ||| ||||||||||| ||||| || ||||||||||| || || ||||| Sbjct: 1857 tgcgtgcgcaggccgccgtcaaggcctctggcaacgtagaagtagacagcagtctgctcc 1798 Query: 420 gcgtcacctccatggcgcctggcatcggcaagcacaaggaggccaaatgggccgagcatg 479 | ||| || |||||||| ||||| || ||||| ||||| |||||||||||||| ||| | Sbjct: 1797 gtgtctccaccatggcgtctggcgtcagcaagtacaagcaggccaaatgggccaagcgcg 1738 Query: 480 ccccgccctgtggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttggag 539 || || || | || ||||||||||||||||| |||||||||||||| ||||| |||| | Sbjct: 1737 ccacggccggccgcaccaccgctggtgctgcagttgtagccgacatcagcctccttggcg 1678 Query: 540 gcggcgatgtctagctggtcaaggcggaaggaggcct 576 ||| ||| || || |||| ||||||||||| |||| Sbjct: 1677 gcgacgacatcgagtgggtcgaggcggaaggaagcct 1641
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 224 bits (113), Expect = 2e-55 Identities = 407/505 (80%) Strand = Plus / Minus Query: 72 tggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtgacccgaattcca 131 ||||||||||| | |||||||| ||||| ||||| || |||| ||||||||| || Sbjct: 2077 tggttgtaggaggggtccatctcatggacgacgagactggtggcggtgacccgggcaccg 2018 Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 2017 gtggcgttgttgaagaggtataccccggcattggcgtagatggcctcagtcgggtaaact 1958 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 ||||| || | | |||| |||||| || |||||||| || || || || |||||| Sbjct: 1957 cgtgaagtcaccaccgacctcccaccctgtgcgaagctctcgacaatggagtggtccacc 1898 Query: 252 agcaccctcactgacagctcttcggcatcaagcaccggcacggtattgcctacaaccctc 311 || ||||| || |||||| | || | || ||||| |||||| | ||||| || |||||| Sbjct: 1897 agaaccctaacagacagcgcctctccgtcgagcactggcacgatgttgccaacgaccctc 1838 Query: 312 ttgacaatgtcgttggcatgagatgagcgcgtctcatcatggcagaagtgtgtatgcaag 371 |||||||||||||||||| | ||||| || | ||| |||||||||||||| || ||| | Sbjct: 1837 ttgacaatgtcgttggcacgggatgaccgtgactcgtcatggcagaagtgcgtgcgcagg 1778 Query: 372 ccaccgtcaaggcccctggcgacatagaagtagacggcggtgcgctccgcgtcacctcca 431 || || |||||||| ||||| ||||||||||||||||| |||||| ||| || ||| Sbjct: 1777 ttgccatcgaggcccctcgcgacgtagaagtagacggcggtctgctccgtgtccccgcca 1718 Query: 432 tggcgcctggcatcggcaagcacaaggaggccaaatgggccgagcatgccccgccctgtg 491 ||||||||||||||||| || || || |||||||| || |||||| || || || | Sbjct: 1717 tggcgcctggcatcggcgagtacgagcaggccaaagggaccgagcgctccacgaccggcc 1658 Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcgttggaggcggcgatgtct 551 |||||||||||||||||||| |||||||| || |||||||| || | |||||||| || Sbjct: 1657 gcgccaccgctggtgctgcagttgtagccaacgtcggcctcctttgcggcggcgacatcg 1598 Query: 552 agctggtcaaggcggaaggaggcct 576 ||| |||| ||||||||||| |||| Sbjct: 1597 agcgggtccaggcggaaggaagcct 1573
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 200 bits (101), Expect = 4e-48 Identities = 290/353 (82%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtg 119 ||||||||||||||||||||||| || |||||||||||||| ||||| || ||| |||| Sbjct: 1973 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgaggctcttggcggtg 1914 Query: 120 acccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcctcc 179 || || |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1913 acgcgggcgttggtggcattgttgaagaggtacacccctgcgttggcgtagatggcctcc 1854 Query: 180 gtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatc 239 || |||||||| || || || || ||| |||| || ||| ||| |||||||| ||||| Sbjct: 1853 gttgggtacacgcgcgacgtcgccgtcgacctcccgccctgcgcgaagctctcgacgatg 1794 Query: 240 gaatgatccaccagcaccctcactgacagctcttcggcatcaagcaccggcacggtattg 299 || ||||||||||| |||||||| || ||| ||| |||| ||||| |||||| |||| Sbjct: 1793 gagtgatccaccaggaccctcaccgagagcgtctcgccatcgagcacgggcacgacattg 1734 Query: 300 cctacaaccctcttgacaatgtcgttggcatgagatgagcgcgtctcatcatggcagaag 359 || || ||||||||||| ||||||||||||| || || | |||||| || ||||||||| Sbjct: 1733 ccgacgaccctcttgacgatgtcgttggcatatgacgacctcgtctcgtcctggcagaag 1674 Query: 360 tgtgtatgcaagccaccgtcaaggcccctggcgacatagaagtagacggcggt 412 || || ||| || || ||||| || |||| ||| ||||||||||||||||| Sbjct: 1673 tgagtgcgcaggctgccatcaagccctctggagacgtagaagtagacggcggt 1621 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 450 agcacaaggaggccaaatgggccgagcatgccccgccctgtggcgccaccgctggtgctg 509 ||||| || ||||| || ||||||||| ||||| || | |||||| |||||||||||| Sbjct: 1595 agcacgagcaggccgaaggggccgagcgcgcccctgccggcggcgcccccgctggtgctg 1536 Query: 510 caattgtagccgacatcggcctcg 533 || ||||||||||| ||||||||| Sbjct: 1535 cagttgtagccgacgtcggcctcg 1512
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1858 gtggcgttgttgaacaggtacaccccagccctggcgtagatggcctccgtcgggtacact 1799 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 || || || || || | ||| ||||||||||| ||||||| ||||| || || ||||| Sbjct: 1798 cgcgacgtcgccgtgaccctcccacccatcgcgaagctctgcacgatggagtggtccacg 1739 Query: 252 agcaccctca 261 |||||||||| Sbjct: 1738 agcaccctca 1729 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||||||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1507 gcgccaccgctgctgctgcagttgtagccgacgtcggcctcgttg 1463
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 gtggcgttgttgaacaggtacaccccagccctggcgtagatggcctccgtcgggtacact 1805 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 || || || || || | ||| ||||||||||| ||||| | ||||| || || ||||| Sbjct: 1804 cgcgacgtcgccgtgaccctcccacccatcgcgaagctttgcacgatggagtggtccacg 1745 Query: 252 agcaccctca 261 |||||||||| Sbjct: 1744 agcaccctca 1735 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||||||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1513 gcgccaccgctgctgctgcagttgtagccgacgtcggcctcgttg 1469
>gb|AF069309.1| Triticum aestivum vacuolar invertase (WIVRV) mRNA, partial cds Length = 1840 Score = 105 bits (53), Expect = 2e-19 Identities = 111/129 (86%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||| |||||||| |||||| ||||||||||||||||||||| ||||| Sbjct: 1374 gtggcgttgttgaaaaggtacacgccagcggcggcgtagatggcctccgtcggatacacc 1315 Query: 192 cgtgatgtt-gcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccac 250 | |||||| ||||| |||| |||||||| || |||||||| |||||||| || ||||| Sbjct: 1314 ctcgatgttcgcggtggaccttccacccatggcgaagctctccacgatcgagtggtccac 1255 Query: 251 cagcaccct 259 ||||||||| Sbjct: 1254 cagcaccct 1246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 495 ccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1022 ccaccgctggtgctgcagttgtagccgacgtcagcctcgttg 981
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||| |||||||| |||||| ||||||||||||||||||||| ||||| Sbjct: 1923 gtggcgttgttgaaaaggtacacgccagcggcggcgtagatggcctccgtcggatacacc 1864 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 | || || ||||| |||| |||||||| || |||||||| || ||||| || |||||| Sbjct: 1863 ctcgacgtcgcggtggacctcccacccatggcgaagctctccacaatcgagtggtccacc 1804 Query: 252 agcaccct 259 | |||||| Sbjct: 1803 aacaccct 1796 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 495 ccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1572 ccaccgctggtgctgcagttgtagccgacgtcagcctcgttg 1531
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 |||||||||||||| ||||||||||| || | ||||||||||||||||| |||||||| Sbjct: 1873 gtggcattgttgaacaggtacacccctgccctagcgtagatggcctccgttgggtacacc 1814 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 | ||||| || || | ||| || |||||||| ||||||| ||||| || || ||||| Sbjct: 1813 ctcgatgtcgccgtgaccctccctcccatcgcgaagctctgcacgatggagtggtccacg 1754 Query: 252 agcaccctca 261 |||||||||| Sbjct: 1753 agcaccctca 1744 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 ||||| |||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1519 gcgccgccgctgctgctgcagttgtagccgacgtcggcctcgttg 1475
>gb|AY245431.1| Lolium perenne sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 1962 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||| | Sbjct: 1877 gtggcgttgttgaagaggtagacccccgcggccgcgtagatggcctccgtcgggtacgcc 1818 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 || || || || || | ||| || |||||||| ||||||| ||||| || || ||||| Sbjct: 1817 cgcgacgtcgccgtgatcctcccgcccatcgcgaagctctgcacgatggagtggtccact 1758 Query: 252 agcaccctcac 262 ||||||||||| Sbjct: 1757 agcaccctcac 1747 Score = 63.9 bits (32), Expect = 5e-07 Identities = 78/91 (85%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 446 ggcaagcacaaggaggccaaatgggccgagcatgccccgccctgtggcgccaccgctggt 505 |||||| || ||||||||||| ||||||||| ||||| || | |||| |||| ||||| Sbjct: 1578 ggcaaggacgaggaggccaaaggggccgagc--gcccc-ccgtacggcggcaccactggt 1522 Query: 506 gctgcaattgtagccgacatcggcctcgttg 536 |||||| ||||||||||| |||||||||||| Sbjct: 1521 gctgcagttgtagccgacgtcggcctcgttg 1491
>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds Length = 1962 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 166 cgtagatggcctccgtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaa 225 |||||||||||||||||||||| || || || || | || |||| || |||||||| | Sbjct: 1864 cgtagatggcctccgtcgggtatacccgcgacgtcaccgttgacctcccgcccatcgcga 1805 Query: 226 agctctcaacgatcgaatgatccaccagcaccct 259 ||||||| ||||||||||||||||| |||||||| Sbjct: 1804 agctctctacgatcgaatgatccacgagcaccct 1771
>gb|AF083856.1|AF083856 Saccharum hybrid cultivar H65-7052 soluble acid invertase (scinvh3'2) mRNA, partial cds Length = 1402 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 61 ccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtga 120 |||||||| | ||||||||||| || |||||||||||||| ||||| | ||| ||||| Sbjct: 1017 ccatgtagtcgtggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtga 958 Query: 121 cccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcct 177 | || | | ||||| |||||||||||| |||| || ||||||||||||||||||| Sbjct: 957 cgcgcacggcggtggcgttgttgaagaggaacacgccggcgttggcgtagatggcct 901 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 596 ggcgcccccgctggtgctgcagttgtagcccacgtcggcctcgttg 551
>gb|AY023475.1| Oryza sativa microsatellite MRG5800 containing (TCT)X8, closest to marker C1357, genomic sequence Length = 224 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgag 106 ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 89 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgag 43
>gb|AY575557.1| Oryza sativa (indica cultivar-group) cultivar IR64 vacuolar invertase 2 mRNA, partial cds Length = 503 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgag 106 ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 263 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgag 217 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacac 190 ||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||| Sbjct: 191 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggggtacac 133
>emb|AJ563384.1|ZMA563384 Zea mays partial ivr2 gene for vacuolar invertase, exons 1-2 Length = 1978 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtg 119 ||||||||| | |||||||| || || |||||||||||||| ||||| | |||| ||| Sbjct: 1685 gccatgtagtcgtggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtg 1626 Query: 120 acccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcctcc 179 ||||| | ||||| |||||||||||| | || || |||||||||||||||||||| Sbjct: 1625 acccgcgcggcggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcg 1566 Query: 180 gtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgat 238 || ||||| || || ||||| ||||| |||| || ||| ||| |||||||| ||||| Sbjct: 1565 gtggggtagacgcgcgatgtggcggtggacctcccgccctgcgcgaagctctcgacgat 1507 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||| |||||||||||||| |||||||| || || ||||||||| Sbjct: 1260 ggcgcccccgctggtgctgcagttgtagcccacgtccgcctcgttg 1215
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgag 106 ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 346515 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgag 346469 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacac 190 ||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||| Sbjct: 346443 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggggtacac 346385 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcg 533 ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 346086 gcgccgccgctggtgctgcagttgtagccgacgtcggcctcg 346045
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgag 106 ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 3562 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgag 3516 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacac 190 ||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||| Sbjct: 3490 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggggtacac 3432 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcg 533 ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 3133 gcgccgccgctggtgctgcagttgtagccgacgtcggcctcg 3092
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgag 106 ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 75299 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgag 75253 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacac 190 ||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||| Sbjct: 75227 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggggtacac 75169 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcg 533 ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 74870 gcgccgccgctggtgctgcagttgtagccgacgtcggcctcg 74829
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgag 106 ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 2083 gccatgtaggcttggttgtaggaggagtccatctcgtggacgacgag 2037 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacac 190 ||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||| Sbjct: 2011 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggggtacac 1953 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcg 533 ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 1654 gcgccgccgctggtgctgcagttgtagccgacgtcggcctcg 1613
>gb|AY107166.1| Zea mays PCO109921 mRNA sequence Length = 1901 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtg 119 ||||||||| | |||||||| || || |||||||||||||| ||||| | |||| ||| Sbjct: 1525 gccatgtagtcgtggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtg 1466 Query: 120 acccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcctcc 179 ||||| | ||||| |||||||||||| | || || |||||||||||||||||||| Sbjct: 1465 acccgcgcggcggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcg 1406 Query: 180 gtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgat 238 || ||||| || || ||||| ||||| |||| || ||| ||| |||||||| ||||| Sbjct: 1405 gtggggtagacgcgcgatgtggcggtggacctcccgccctgcgcgaagctctcgacgat 1347 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||| |||||||||||||| |||||||| || || ||||||||| Sbjct: 1100 ggcgcccccgctggtgctgcagttgtagcccacgtccgcctcgttg 1055
>gb|U31451.1|ZMU31451 Zea mays invertase mRNA, partial cds Length = 1530 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 60 gccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtg 119 ||||||||| | |||||||| || || |||||||||||||| ||||| | |||| ||| Sbjct: 1511 gccatgtagtcgtggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtg 1452 Query: 120 acccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcctcc 179 ||||| | ||||| |||||||||||| | || || |||||||||||||||||||| Sbjct: 1451 acccgcgcggcggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcg 1392 Query: 180 gtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgat 238 || ||||| || || ||||| ||||| |||| || ||| ||| |||||||| ||||| Sbjct: 1391 gtggggtagacgcgcgatgtggcggtggacctcccgccctgcgcgaagctctcgacgat 1333 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||| |||||||||||||| |||||||| || || ||||||||| Sbjct: 1086 ggcgcccccgctggtgctgcagttgtagcccacgtccgcctcgttg 1041
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 61 ccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtga 120 |||||||| | ||||||||||| || |||||||||||||| ||||| | ||| ||||| Sbjct: 1909 ccatgtagtcgtggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtga 1850 Query: 121 cccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcct 177 | || | ||||| |||||||||||| |||| || ||||||||||||||||||| Sbjct: 1849 cgcgcgcggcggtggcgttgttgaagaggaacacgccggcgttggcgtagatggcct 1793 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||| |||||||||||||| |||||||| || || ||||||||| Sbjct: 1488 ggcgcccccgctggtgctgcagttgtagcccacgtctgcctcgttg 1443
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 61 ccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtga 120 |||||||| | ||||||||||| || |||||||||||||| ||||| | ||| ||||| Sbjct: 1690 ccatgtagtcgtggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtga 1631 Query: 121 cccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcct 177 | || | ||||| |||||||||||| |||| || ||||||||||||||||||| Sbjct: 1630 cgcgcgcggcggtggcgttgttgaagaggaacacgccggcgttggcgtagatggcct 1574 Score = 52.0 bits (26), Expect = 0.002 Identities = 40/46 (86%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 ||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 1269 ggcsccgccgctggtgctgcagttgtagccmacgtcggcytcgttg 1224
>gb|AF492836.1| Lolium perenne putative sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 2508 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 138 ttgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacactcgtgat 197 |||||||| ||||||||||| || |||||||||||||||||||||||| | || ||| Sbjct: 1894 ttgttgaacaggtacacccctgccgcggcgtagatggcctccgtcgggtatgcccgcgat 1835 Query: 198 gttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccaccagcacc 257 || | || ||| ||||||||| | ||||||| ||||| || || ||||| |||||| Sbjct: 1834 gtcaccgtggtcctcccacccatcacgaagctctgcacgatggagtggtccactagcacc 1775 Query: 258 ctcactga 265 |||||||| Sbjct: 1774 ctcactga 1767
>dbj|AB125218.1| Lolium perenne mRNA for putative fructosyltransferase2, complete cds Length = 2462 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 138 ttgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacactcgtgat 197 |||||||| ||||||||||| || |||||||||||||||||||||||| | || ||| Sbjct: 1879 ttgttgaacaggtacacccctgccgcggcgtagatggcctccgtcgggtatgcccgcgat 1820 Query: 198 gttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccaccagcacc 257 || | || ||| ||||||||| | ||||||| ||||| || || ||||| |||||| Sbjct: 1819 gtcaccgtggtcctcccacccatcacgaagctctgcacgatggagtggtccactagcacc 1760 Query: 258 ctcactga 265 |||||||| Sbjct: 1759 ctcactga 1752
>emb|AJ297369.1|FAR297369 Festuca arundinacea mRNA for sucrose:sucrose 1-fructosyltransferase (1-SST gene) Length = 2045 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcg 533 |||| |||||||||||||||| ||||||| ||||||||||||| Sbjct: 1539 ggcggcaccgctggtgctgcagttgtagctgacatcggcctcg 1497 Score = 48.1 bits (24), Expect = 0.032 Identities = 81/100 (81%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 ||||| |||||||||||||| || || || |||||||| ||||| ||||||||| | Sbjct: 1880 gtggcgttgttgaagaggtagactcccgccgctgcgtagatagcctcagtcgggtacgcc 1821 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctct 231 || ||||| || || | ||| ||||||||||| ||||||| Sbjct: 1820 cgcgatgtcgccgtaatcctcccacccatcgcgaagctct 1781
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 491 ggcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 |||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 1269 ggcgccgccgctggtgctgcagttgtagcccacgtcggcctcgttg 1224 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 61 ccatgtaggcttggttgtaggaagaatccatctcgtggaccacgagtctagtggtggtga 120 |||||||| | ||||||||||| || |||||||||||||| ||||| | ||| ||||| Sbjct: 1690 ccatgtagtcgtggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtga 1631 Query: 121 cccgaattccagtggcattgttgaagaggtacaccccagcgttggcgtagatggcct 177 | || | ||||| |||||||||||| |||| || ||||||||||| ||||||| Sbjct: 1630 cgcgcgcggcggtggcgttgttgaagaggaacacgccggcgttggcgtaaatggcct 1574
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 168 tagatggcctccgtcgggtacactcgtgatgttgcggtcaacctaccacccatcgcaaag 227 |||||||||||||| |||||||| | |||||||| || |||| || ||||| || ||| Sbjct: 1870 tagatggcctccgttgggtacaccctcgatgttgccgtggacctgccgcccatggcgaag 1811 Query: 228 ctctcaacgatcgaatgatccaccagcaccct 259 ||||| ||||| || || ||||| |||||||| Sbjct: 1810 ctctccacgattgagtggtccacgagcaccct 1779 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 494 gccaccgctggtgctgcaattgtagcc 520 ||||||||||||||||||||||||||| Sbjct: 1559 gccaccgctggtgctgcaattgtagcc 1533
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 |||||||||||||| ||||| ||||| || ||||| ||||||||||||||||| | Sbjct: 1934 gtggcattgttgaacaggtagacccccgccgccgcgtaaatggcctccgtcgggtaggcc 1875 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccacc 251 | |||||| || |||| ||| || |||||| | ||||||| ||||| || || ||||| Sbjct: 1874 cttgatgtcgccgtcatcctcccgcccatcacgaagctctgcacgatggagtggtccacg 1815 Query: 252 agcaccct 259 |||||||| Sbjct: 1814 agcaccct 1807
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 165 gcgtagatggcctccgtcgggtacactcgtgatgttgcggtcaacctaccacccatcgca 224 |||||||||||||| ||||||||| | | || ||||| |||||||| || |||||||| Sbjct: 3196 gcgtagatggcctcggtcgggtacgccctcgacgttgctgtcaacctcccgcccatcgcg 3137 Query: 225 aagctct 231 ||||||| Sbjct: 3136 aagctct 3130 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 500 gctggtgctgcaattgtagccgacatcggcctcgttg 536 ||||||| |||| ||||||| ||||||||||||||| Sbjct: 2873 gctggtggtgcagttgtagctaacatcggcctcgttg 2837
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 165 gcgtagatggcctccgtcgggtacactcgtgatgttgcggtcaacctaccacccatcgca 224 |||||||||||||| ||||||||| | | || ||||| |||||||| || |||||||| Sbjct: 1914 gcgtagatggcctcggtcgggtacgccctcgacgttgctgtcaacctcccgcccatcgcg 1855 Query: 225 aagctct 231 ||||||| Sbjct: 1854 aagctct 1848 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 500 gctggtgctgcaattgtagccgacatcggcctcgttg 536 ||||||| |||| ||||||| ||||||||||||||| Sbjct: 1591 gctggtggtgcagttgtagctaacatcggcctcgttg 1555
>dbj|AB088410.1| Triticum aestivum 1-FFT-B mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2251 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtac 188 |||||||||||||| ||||| ||||| || ||||| |||||||||||||||||| Sbjct: 1895 gtggcattgttgaacaggtagacccccgccgccgcgtaaatggcctccgtcgggtac 1839
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase Length = 2091 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 492 gcgccaccgctggtgctgcaattgtagccgacatcggcctcgttg 536 ||||| |||||| | ||||| |||||||| ||||||||||||||| Sbjct: 1457 gcgccgccgctgctactgcagttgtagcccacatcggcctcgttg 1413
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 48.1 bits (24), Expect = 0.032 Identities = 99/124 (79%) Strand = Plus / Minus Query: 138 ttgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacactcgtgat 197 |||||||| | ||||||||| ||| |||||||| ||||| ||||||||||| || || Sbjct: 1811 ttgttgaaaacgtacacccctgcggccgcgtagatagcctctgtcgggtacacccgcgac 1752 Query: 198 gttgcggtcaacctaccacccatcgcaaagctctcaacgatcgaatgatccaccagcacc 257 || || || | ||| || |||||||| ||||||| ||||| || || || || |||||| Sbjct: 1751 gtcgccgtgaccctcccgcccatcgcgaagctctgcacgatggagtggtctacgagcacc 1692 Query: 258 ctca 261 |||| Sbjct: 1691 ctca 1688
>emb|AL445238.12| Human DNA sequence from clone RP11-394A14 on chromosome 13 Contains a protein phosphatase 1, regulatory (inhibitor) subunit 2 (PPP1R2) pseudogene, a novel gene and an olfactory receptor pseudogene, complete sequence Length = 174801 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttacagt 59 ||||||||||||||||||||||| Sbjct: 127445 ttttcccattttgtttttacagt 127423
>gb|BT009003.1| Triticum aestivum clone wdk2c.pk017.f14:fis, full insert mRNA sequence Length = 1612 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 498 ccgctggtgctgcaattgtagccgacatcggcctc 532 |||||| ||||||| |||||||| ||||||||||| Sbjct: 965 ccgctgctgctgcagttgtagcccacatcggcctc 931
>gb|BT008969.1| Triticum aestivum clone wdk1c.pk014.c11:fis, full insert mRNA sequence Length = 1844 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 498 ccgctggtgctgcaattgtagccgacatcggcctc 532 |||||| ||||||| |||||||| ||||||||||| Sbjct: 1039 ccgctgctgctgcagttgtagcccacatcggcctc 1005
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 498 ccgctggtgctgcaattgtagccgacatcggcctcgttggaggcggcgatg 548 |||||||||||||| |||||||| || || ||||| ||| |||||||||| Sbjct: 1167 ccgctggtgctgcagttgtagccaacgtcagcctcattgagggcggcgatg 1117 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 cgtagatggcctccgtcgggtacac 190 ||||||| ||||||||||||||||| Sbjct: 1484 cgtagatagcctccgtcgggtacac 1460 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 375 ccgtcaaggcccctggcgacatagaagta 403 |||||||||||| |||| ||||||||||| Sbjct: 1275 ccgtcaaggcccttggccacatagaagta 1247
>dbj|AB029887.1| Triticum aestivum 6-SFT mRNA for sucrose:fructan 6-fructosyltransferase, complete cds Length = 2220 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 498 ccgctggtgctgcaattgtagccgacatcggcctc 532 |||||| ||||||| |||||||| ||||||||||| Sbjct: 1444 ccgctgctgctgcagttgtagcccacatcggcctc 1410
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucrose-sucrose-1-fructosyltransferase (1-sst gene) Length = 2157 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 132 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 191 |||||||||||||| ||||| ||||| || || ||||||||||| ||||||||| | Sbjct: 1820 gtggcattgttgaacaggtagacccccgccgccgcatagatggcctcggtcgggtacgcc 1761 Query: 192 cgtgatgttgcggtcaacctaccacccatcgcaaagct 229 | || || | |||||||| ||||||||||| ||||| Sbjct: 1760 ctcgacgtcgtcgtcaacctcccacccatcgcgaagct 1723
>emb|BX842566.4| Mouse DNA sequence from clone RP23-174M7 on chromosome X, complete sequence Length = 180961 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 tctcatcatggcagaagtgtgt 364 |||||||||||||||||||||| Sbjct: 91822 tctcatcatggcagaagtgtgt 91843
>emb|AL929107.14| Mouse DNA sequence from clone RP23-6C6 on chromosome X, complete sequence Length = 59720 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 tctcatcatggcagaagtgtgt 364 |||||||||||||||||||||| Sbjct: 59307 tctcatcatggcagaagtgtgt 59328
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 tcaagcaccggcacggtattg 299 ||||||||||||||||||||| Sbjct: 2752246 tcaagcaccggcacggtattg 2752226
>emb|AL136982.11| Human DNA sequence from clone RP11-96C23 on chromosome 10 Contains a KIAA0187 pseudogene, the gene for adipose specific 2 (APM2), the FAM25A gene for family with sequence similarity 25, member A, five novel genes, the GLUD1 gene for glutamate dehydrogenase 1, the 5' end of a novel gene and four CpG islands, complete sequence Length = 182959 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 44090 ttttcccattttgtttttaca 44070
>gb|AC025268.8| Homo sapiens chromosome 10 clone RP11-411A19, complete sequence Length = 149668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 6620 ttttcccattttgtttttaca 6640
>ref|XM_937229.1| PREDICTED: Homo sapiens KIAA1975 protein similar to MRIP2, transcript variant 3 (KIAA1975), mRNA Length = 3170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 2903 ttttcccattttgtttttaca 2883
>ref|XM_943227.1| PREDICTED: Homo sapiens KIAA1975 protein similar to MRIP2, transcript variant 4 (KIAA1975), mRNA Length = 1690 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 1423 ttttcccattttgtttttaca 1403
>ref|XM_370567.4| PREDICTED: Homo sapiens KIAA1975 protein similar to MRIP2, transcript variant 1 (KIAA1975), mRNA Length = 3170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 2903 ttttcccattttgtttttaca 2883
>ref|XM_931482.1| PREDICTED: Homo sapiens KIAA1975 protein similar to MRIP2, transcript variant 2 (KIAA1975), mRNA Length = 1690 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 1423 ttttcccattttgtttttaca 1403
>emb|Y11124.1|CIPINVERT C.intybus mRNA for putative invertase Length = 1796 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 caaagctctcaacgatcgaatgatc 247 ||||||||||||||||||| ||||| Sbjct: 1539 caaagctctcaacgatcgagtgatc 1515
>emb|AJ006067.1|ACE6067 Allium cepa mRNA for invertase Length = 2438 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagctctcaacgatcgaatgatccaccag 253 ||||||||||| ||||||||||| ||||| Sbjct: 1948 aagctctcaacaatcgaatgatcaaccag 1920
>dbj|AB075855.1| Homo sapiens mRNA for KIAA1975 protein Length = 4559 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ttttcccattttgtttttaca 57 ||||||||||||||||||||| Sbjct: 4313 ttttcccattttgtttttaca 4293
>ref|XM_610191.2| PREDICTED: Bos taurus similar to HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (LOC531691), mRNA Length = 3069 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ctcactgacagctcttcggc 277 |||||||||||||||||||| Sbjct: 1821 ctcactgacagctcttcggc 1802
>ref|NM_001040293.1| Danio rerio zgc:136455 (zgc:136455), mRNA Length = 1160 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcactgacagctcttcggcatcaa 282 ||||||| |||||||||||||||| Sbjct: 1140 tcactgaaagctcttcggcatcaa 1117
>gb|BC115141.1| Danio rerio cDNA clone MGC:136455 IMAGE:7433898, complete cds Length = 1160 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcactgacagctcttcggcatcaa 282 ||||||| |||||||||||||||| Sbjct: 1140 tcactgaaagctcttcggcatcaa 1117
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tttcccattttgtttttaca 57 |||||||||||||||||||| Sbjct: 176058 tttcccattttgtttttaca 176077
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tttcccattttgtttttaca 57 |||||||||||||||||||| Sbjct: 8434 tttcccattttgtttttaca 8453
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone F16A16 (ESSAII project) Length = 97155 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tttcccattttgtttttaca 57 |||||||||||||||||||| Sbjct: 1010 tttcccattttgtttttaca 991
>gb|U40819.1|RNU40819 Rattus norvegicus 5'-AMP-activated protein kinase alpha-1 catalytic subunit mRNA, complete cds Length = 1647 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 catcatggcagaagtgtgta 365 |||||||||||||||||||| Sbjct: 1224 catcatggcagaagtgtgta 1243
>gb|DQ406744.1| Volvox carteri f. nagariensis Met1 (met1) gene, complete cds Length = 29854 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 cgccaccgctggtgctgcaa 512 |||||||||||||||||||| Sbjct: 8524 cgccaccgctggtgctgcaa 8543
>gb|AF222932.1| Psathyrostachys fragilis sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ggcctccgtcgggtacactcgtga 196 ||||||| |||||||||||||||| Sbjct: 221 ggcctccatcgggtacactcgtga 198
>ref|XM_687067.1| PREDICTED: Danio rerio similar to GFHL3075 (LOC563710), mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gatccaccagcaccctcact 263 |||||||||||||||||||| Sbjct: 1916 gatccaccagcaccctcact 1935
>emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 in linkage group 10, complete sequence Length = 163542 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gatccaccagcaccctcact 263 |||||||||||||||||||| Sbjct: 99325 gatccaccagcaccctcact 99344
>ref|NM_019142.1| Rattus norvegicus protein kinase, AMP-activated, alpha 1 catalytic subunit (Prkaa1), mRNA Length = 1647 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 catcatggcagaagtgtgta 365 |||||||||||||||||||| Sbjct: 1224 catcatggcagaagtgtgta 1243
>ref|NM_001003852.1| Danio rerio Iglon2 (LOC445375), mRNA Length = 1941 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcactgacagctcttcggcatcaa 282 ||||||| |||||||||||||||| Sbjct: 1218 tcactgaaagctcttcggcatcaa 1195
>gb|BC095250.1| Danio rerio Iglon2, mRNA (cDNA clone IMAGE:7222481), partial cds Length = 1436 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcactgacagctcttcggcatcaa 282 ||||||| |||||||||||||||| Sbjct: 1047 tcactgaaagctcttcggcatcaa 1024
>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence Length = 142118 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gaccacgagtctagtggtgg 117 |||||||||||||||||||| Sbjct: 4363 gaccacgagtctagtggtgg 4344
>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete sequence Length = 186366 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 atggcagaagtgtgtatgca 369 |||||||||||||||||||| Sbjct: 66613 atggcagaagtgtgtatgca 66632
>gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromosome unknown, complete sequence Length = 220538 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 atggcagaagtgtgtatgca 369 |||||||||||||||||||| Sbjct: 8679 atggcagaagtgtgtatgca 8660
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 271 cttcggcatcaagcaccggcacggtattgcct 302 |||||||||| ||| |||||||||||||||| Sbjct: 1395947 cttcggcatcgcgcatcggcacggtattgcct 1395978
>gb|AF002656.1|AF002656 Asparagus officinalis acid invertase mRNA, complete cds Length = 2388 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 221 cgcaaagctctcaacgatcgaatgatccacca 252 |||||||||||| |||||||| || ||||||| Sbjct: 1848 cgcaaagctctccacgatcgagtggtccacca 1817
>gb|AF241638.1| Danio rerio neurotrimin mRNA, complete cds Length = 1941 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcactgacagctcttcggcatcaa 282 ||||||| |||||||||||||||| Sbjct: 1218 tcactgaaagctcttcggcatcaa 1195 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,826,808 Number of Sequences: 3902068 Number of extensions: 3826808 Number of successful extensions: 70020 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69748 Number of HSP's gapped (non-prelim): 262 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)