>URED_BORPE (P0A4R4) Urease accessory protein ureD|
          Length = 284

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = -3

Query: 569 SRRKIADRSNSSRGGHHLLAVWEDNEDEYWQHSGLTPGRRLGVDGKLLWVNGLLVLPQTE 390
           +R +I   S ++  G  L+ +   N+  +W    L     L VDG+LLWV+  LV  Q +
Sbjct: 127 ARNRIQLESGAAAIGWDLIQLGRVNQSGHWSQGRLHTATELYVDGRLLWVDQGLVGAQDD 186

Query: 389 LK 384
           ++
Sbjct: 187 VR 188

>URED_BORPA (P0A4R6) Urease accessory protein ureD|
          Length = 284

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = -3

Query: 569 SRRKIADRSNSSRGGHHLLAVWEDNEDEYWQHSGLTPGRRLGVDGKLLWVNGLLVLPQTE 390
           +R +I   S ++  G  L+ +   N+  +W    L     L VDG+LLWV+  LV  Q +
Sbjct: 127 ARNRIQLESGAAAIGWDLIQLGRVNQSGHWSQGRLHTATELYVDGRLLWVDQGLVGAQDD 186

Query: 389 LK 384
           ++
Sbjct: 187 VR 188

>URED_BORBR (P0A4R5) Urease accessory protein ureD|
          Length = 284

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = -3

Query: 569 SRRKIADRSNSSRGGHHLLAVWEDNEDEYWQHSGLTPGRRLGVDGKLLWVNGLLVLPQTE 390
           +R +I   S ++  G  L+ +   N+  +W    L     L VDG+LLWV+  LV  Q +
Sbjct: 127 ARNRIQLESGAAAIGWDLIQLGRVNQSGHWSQGRLHTATELYVDGRLLWVDQGLVGAQDD 186

Query: 389 LK 384
           ++
Sbjct: 187 VR 188

>RS4_COXBU (Q83EQ3) 30S ribosomal protein S4|
          Length = 206

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = -3

Query: 560 KIADRSNSSRGGHHLLAVWEDNEDEYWQHSGLTPGR---RLGVDGKLLWVNGLLV-LPQT 393
           K ADR   S G + LL + E   D      G    R   R  +  K + VNG +V +P  
Sbjct: 77  KQADRLKGSTGDN-LLKLLESRLDNVVYRMGFAATRAEARQLISHKAILVNGEVVNIPSY 135

Query: 392 ELKDGDIVEVRT 357
           ++K GDI+EVR+
Sbjct: 136 QVKPGDIIEVRS 147

>CDA1_YEAST (Q06702) Chitin deacetylase 1 precursor (EC 3.5.1.41)|
          Length = 301

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +2

Query: 128 VNKDTCSW--YLVAYVQNTTPCYSLPASFDYFPFPQMDCTLRRFWLCLRLIFFCILHPLY 301
           ++++ CS+  Y    V + T C+ L  +FD  P P  +  L++  L  R  FF +     
Sbjct: 86  ISREQCSFDCYNCIDVDDVTSCFKLSQTFDDGPAPATEALLKK--LRQRTTFFVL----- 138

Query: 302 Q*ANLINYPD 331
              N +NYPD
Sbjct: 139 -GINTVNYPD 147

>SEC7_YEAST (P11075) Protein transport protein SEC7|
          Length = 2009

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -3

Query: 629 QDNASMGGASTPSSIGSREKSRRKIADRSNSSRGGHHLLAVWEDNEDE 486
           +D+ S+ G ST SS G  E+S     + SNSS G        E+ E+E
Sbjct: 130 EDSESVSGESTESSSGEDEESDESDGNTSNSSSGDESGSEEEEEEEEE 177

>YKD7_YEAST (P32858) Hypothetical 12.9 kDa protein in PTM1-IXR1 intergenic|
           region
          Length = 118

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 155 LVAYVQNTTPCYSLPASFDYFPFPQ-MDCTLRRFWLCLRLIFFCILHPLY 301
           LV+   +T PC    AS +  PFP+    +L RF  CL    FCI  P +
Sbjct: 68  LVSVCSHTDPC---TASCNLIPFPRPFSNSLTRFLFCLGSARFCISFPCF 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,281,671
Number of Sequences: 219361
Number of extensions: 2309072
Number of successful extensions: 6486
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6484
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)