ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 373 e-100
2emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 365 4e-98
3gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 365 4e-98
4emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 341 6e-91
5emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 335 4e-89
6gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 218 6e-54
7dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 68 1e-08
8dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 68 1e-08
9emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr... 64 2e-07
10gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo... 60 3e-06
11dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 60 3e-06
12gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp... 56 5e-05
13gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 56 5e-05
14gb|AC113171.3| Homo sapiens chromosome 3 clone RP11-696A14, comp... 52 8e-04
15gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp... 52 8e-04
16gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca... 52 8e-04
17gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat... 52 8e-04
18gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat... 52 8e-04
19emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat... 52 8e-04
20dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c... 52 8e-04
21dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 52 8e-04
22gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat... 50 0.003
23emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 46 0.048
24gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi... 46 0.048
25gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate... 46 0.048
26dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 46 0.048
27ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family,... 44 0.19
28gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, p... 44 0.19
29gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, p... 44 0.19
30dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 44 0.19
31dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 44 0.19
32dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 44 0.19
33dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIK... 44 0.19
34gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos... 44 0.19
35gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph... 44 0.19
36gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph... 44 0.19
37gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi... 44 0.19
38gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi... 44 0.19
39gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca... 44 0.19
40gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ... 44 0.19
41gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha... 44 0.19
42gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos... 44 0.19
43gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, comp... 42 0.75
44emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 ... 42 0.75
45gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cance... 42 0.75
46gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate... 42 0.75
47gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodi... 42 0.75
48dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 42 0.75
49gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, com... 40 3.0
50gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, compl... 40 3.0
51gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 3.0
52gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
53gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
54gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.0
55gb|AC113454.8| Mus musculus chromosome 3, clone RP24-176I19, com... 40 3.0
56ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 3.0
57emb|AL513485.10| Human DNA sequence from clone RP11-48O20 on chr... 40 3.0
58emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on ch... 40 3.0
59emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom... 40 3.0
60gb|AC073617.16| Homo sapiens Xp BAC RP11-413F15 (Roswell Park Ca... 40 3.0
61gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's H... 40 3.0
62gb|AC163014.5| Mus musculus chromosome 8, clone RP23-216D14, com... 40 3.0
63gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 40 3.0
64dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary ... 40 3.0
65dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
66dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
67dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
68dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
69dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
70dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
71emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134... 40 3.0
72dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
73gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, co... 40 3.0
74gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
75emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.0
76emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on ch... 40 3.0
77gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, comp... 40 3.0 
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  373 bits (188), Expect = e-100
 Identities = 222/232 (95%), Gaps = 1/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatacatagcc-ccgacagcattcacatacaagcatgttttctcgagccatgttggtac 59
           |||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 804 atatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgttggtac 745

                                                                       
Query: 60  atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 744 atgaacatggacatacacatattcttaggaacaaataagaaagataaatggacaaggaaa 685

                                                                       
Query: 120 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtc 179
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || 
Sbjct: 684 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgcggcccgtggtg 625

                                                               
Query: 180 agtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 624 agtgagctgtttatgccttgccggactcctcgcagcccggtggcttgaaggc 573
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  365 bits (184), Expect = 4e-98
 Identities = 221/232 (95%), Gaps = 1/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatacatagcc-ccgacagcattcacatacaagcatgttttctcgagccatgttggtac 59
           |||||||||||| |||| ||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 683 atatacatagccaccgatagcattctcatacgagcatgctttctcgagccatgttggtac 624

                                                                       
Query: 60  atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 564

                                                                       
Query: 120 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtc 179
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| 
Sbjct: 563 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatatggcctgtcgtg 504

                                                               
Query: 180 agtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 503 agtgagctgtttaggccttgccggactcctcgcagcccggtggcttgaaggc 452
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  365 bits (184), Expect = 4e-98
 Identities = 221/232 (95%), Gaps = 1/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatacatagcc-ccgacagcattcacatacaagcatgttttctcgagccatgttggtac 59
           |||||||||||| |||| ||||||||||||| |||||| |||||||||||||||| ||||
Sbjct: 257 atatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgttcgtac 198

                                                                       
Query: 60  atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 138

                                                                       
Query: 120 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtc 179
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| 
Sbjct: 137 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatatggcctgtcgtg 78

                                                               
Query: 180 agtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 77  agtgagctgtttaggccttgccggactcctcgcagcccggtggcttgaaggc 26
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  341 bits (172), Expect = 6e-91
 Identities = 218/232 (93%), Gaps = 1/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatacatagcc-ccgacagcattcacatacaagcatgttttctcgagccatgttggtac 59
           |||||||||||| ||||  |||||||||||| |||| | ||||||||||||||||| |||
Sbjct: 532 atatacatagccaccgattgcattcacatacgagcacgctttctcgagccatgttgttac 473

                                                                       
Query: 60  atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 119
           |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 472 atgaacatggacatacacatattcttaggaacaagtaagaaagacaaatggagaaggaaa 413

                                                                       
Query: 120 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtc 179
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || 
Sbjct: 412 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccgtggtg 353

                                                               
Query: 180 agtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 352 agtgagctgtttaggccttgccggactcctcgcagcccggtggcttgaaggc 301
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  335 bits (169), Expect = 4e-89
 Identities = 220/233 (94%), Gaps = 3/233 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatacatagcc-ccgacagcattcacatacaagcatgttttctcgagccatgttggtac 59
           |||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 764 atatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgttggtac 705

                                                                       
Query: 60  atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 645

                                                                       
Query: 120 acccaaagcaatgtcagagttgacaaaactgcaatggcac-tttatatgtggcccatcgt 178
           |||||||||||||||||||||||||||||||||||||||| |||||||  ||||  ||||
Sbjct: 644 acccaaagcaatgtcagagttgacaaaactgcaatggcacttttatat-aggcctgtcgt 586

                                                                
Query: 179 cagtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
            ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||
Sbjct: 585 gagtgagctgtttaggccttgccggactcctcgcagcccggtggcttggaggc 533
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>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  218 bits (110), Expect = 6e-54
 Identities = 209/229 (91%), Gaps = 11/229 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatacatagcc-ccgacagcattcacatacaagcatgttttctcgagccatgttggtac 59
           |||||||||||| |||| ||||||||||||| |||||| |||||||||| ||||||||||
Sbjct: 728 atatacatagccaccgatagcattcacatacgagcatgctttctcgagc-atgttggtac 670

                                                                       
Query: 60  atgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaaa 119
           ||||||||||   |||||| ||| |||||||||| |||||||||||| ||||||||||||
Sbjct: 669 atgaacatgggactacacacatt-ttaggaacaa-taagaaagataa-tggagaaggaaa 613

                                                                       
Query: 120 acccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtc 179
           |||  ||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 612 acc--aagca-tgtcagagttgacaaa-ctgcaatggcactt-atatgtg-cccatcgtc 559

                                                            
Query: 180 agtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaa 228
           |||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 558 agtgagctgtttatgccttgcccgactcctggcagcctggtggcttgaa 510
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>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p9-1
          Length = 739

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 194 gccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggc 698
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>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p2-1
          Length = 653

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 194 gccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggc 612
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>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
          Length = 845

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 189 tttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
           |||||||||||||||| |||||||||| ||||||| |||||||
Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggc 554
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>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, complete cds
          Length = 779

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 194 gccttgccggactcctcgcagcctggtggcttgaaggc 231
           ||||||||||| |||||||||||||||||| |||||||
Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggc 544
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>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p10-1
          Length = 629

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 194 gccttgccggactcctcgcagcctggtggcttgaaggc 231
           |||||||||||||||||||| ||||||||| |||||||
Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggc 588
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>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 586

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 200 ccggactcctcgcagcctggtggcttgaaggc 231
           ||||| ||||||||||||||||||||||||||
Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggc 554
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>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
            gene, exons 1 and 2
          Length = 2205

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 188  gtttatgccttgccggactcctcgcagcctggtggcttgaaggc 231
            ||||| |||||||||||||||||||| || |||||| |||||||
Sbjct: 1511 gtttaggccttgccggactcctcgcaacccggtggcctgaaggc 1468
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>gb|AC113171.3| Homo sapiens chromosome 3 clone RP11-696A14, complete sequence
          Length = 183599

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 91    caaataagaaagataaatggagaaggaaaa 120
             ||||||||||||| ||||||||||||||||
Sbjct: 97466 caaataagaaagaaaaatggagaaggaaaa 97437
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>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 600

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||||||
Sbjct: 593 tcctcgcagcctggtggcttgaaggc 568
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>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 594

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||||||
Sbjct: 587 tcctcgcagcctggtggcttgaaggc 562
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>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggc 472
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>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggc 472
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>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small
           subunit (rbcS gene)
          Length = 518

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 194 gccttgccggactcctcgcagcctggtggcttgaaggc 231
           |||||||||||||||||||| || |||||| |||||||
Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggc 477
to top
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ave-A
          Length = 590

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||||||||||||||||||
Sbjct: 590 tcctcgcagcctggtggcttgaaggc 565
to top
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p13-1
          Length = 985

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 194 gccttgccggactcctcgcagcctggtggcttgaaggc 231
           |||||||||||||||||||| || |||||| |||||||
Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggc 944
to top
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 593

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 200 ccggactcctcgcagcctggtggcttgaa 228
           ||||| |||||||||||||||||||||||
Sbjct: 592 ccggattcctcgcagcctggtggcttgaa 564
to top
>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
              complete sequence
          Length = 155592

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 56     gtacatgaacatggacatacaca 78
              |||||||||||||||||||||||
Sbjct: 152158 gtacatgaacatggacatacaca 152136
to top
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 206 tcctcgcagcctggtggcttgaa 228
           |||||||||||||||||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaa 475
to top
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 206 tcctcgcagcctggtggcttgaa 228
           |||||||||||||||||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaa 475
to top
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase Small subunit, complete cds,
           clone:p6-1
          Length = 638

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 194 gccttgccggactcctcgcagcctggtggcttgaa 228
           |||||||||||||||||||| || |||||| ||||
Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaa 600
to top
>ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2
           (Ugt3a2), mRNA
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
to top
>gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2,
           transcript variant 1, mRNA (cDNA clone MGC:37820
           IMAGE:5098754), complete cds
          Length = 2196

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
to top
>gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2,
           transcript variant 1, mRNA (cDNA clone MGC:37957
           IMAGE:5134131), complete cds
          Length = 2192

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 849 aaaatccaaagcaaagtcagagttgacaaa 820
to top
>dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430112M20 product:Hypothetical protein
           (Hypothetical UDP-glucoronosyl and UDP-glucosyl
           transferase containing protein), full insert sequence
          Length = 2284

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 883 aaaatccaaagcaaagtcagagttgacaaa 854
to top
>dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630011D02 product:HYPOTHETICAL 59.7 KDA
           PROTEIN [Mus musculus]; weakly similar to
           UDP-Glycosyltransferase/glycogen phosphorylase, full
           insert sequence
          Length = 1723

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 878 aaaatccaaagcaaagtcagagttgacaaa 849
to top
>dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730018P11 product:hypothetical
           UDP-glucoronosyl and UDP-glucosyl transferase containing
           protein, full insert sequence
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
to top
>dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530069C13 product:hypothetical
           UDP-Glycosyltransferase/glycogen phosphorylase structure
           containing protein, full insert sequence
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 117 aaaacccaaagcaatgtcagagttgacaaa 146
           |||| ||||||||| |||||||||||||||
Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
to top
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, nuclear gene
           encoding chloroplast protein, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, partial cds
          Length = 504

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 206 tcctcgcagcctggtggcttgaaggc 231
           ||||||||||| ||||||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggc 472
to top
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 80     attcttaggaacaaataagaaagat 104
              ||||||||||||||| |||||||||
Sbjct: 131901 attcttaggaacaaaaaagaaagat 131877
to top
>emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 on chromosome 10 Contains the
              ZNF37B pseudogene for zinc finger protein 37b (KOX 21), a
              eukaryotic translation initiation factor 3 subunit 6
              interacting protein (EIF3S6IP) pseudogene, the 3' end of
              the ZNF11B gene for zinc finger protein 11b (KOX 2), a
              novel gene (FLJ23327) and two CpG Islands, complete
              sequence
          Length = 146328

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 126    agcaatgtcagagttgacaaa 146
              |||||||||||||||||||||
Sbjct: 137861 agcaatgtcagagttgacaaa 137841
to top
>gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 221540

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     attcttaggaacaaataagaaagat 104
              ||||||||||||||| |||||||||
Sbjct: 193767 attcttaggaacaaaaaagaaagat 193791
to top
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, partial cds
          Length = 620

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 200 ccggactcctcgcagcctggtggcttgaa 228
           ||||| ||||||||||| |||||||||||
Sbjct: 619 ccggattcctcgcagcccggtggcttgaa 591
to top
>gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodium channel subtype 2
            (rSkM2) gene
          Length = 2825

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 60   atgaacatggacatacacata 80
            |||||||||||||||||||||
Sbjct: 1420 atgaacatggacatacacata 1400
to top
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 188  gtttatgccttgccggactcctcgcagcctggtggcttgaa 228
            ||||| |||||||| ||||||||||| || |||||| ||||
Sbjct: 1265 gtttaggccttgccagactcctcgcaacccggtggcctgaa 1225
to top
>gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, complete sequence
          Length = 41406

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 56    gtacatgaacatggacatacacatattc 83
             ||||||||||||| ||||| ||||||||
Sbjct: 12032 gtacatgaacatgtacatatacatattc 12005
to top
>gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, complete sequence
          Length = 45765

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 56    gtacatgaacatggacatacacatattc 83
             ||||||||||||| ||||| ||||||||
Sbjct: 41180 gtacatgaacatgtacatatacatattc 41153
to top
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
               sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     aaacccaaagcaatgtcaga 137
               ||||||||||||||||||||
Sbjct: 1130897 aaacccaaagcaatgtcaga 1130916
to top
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0024K17 map near S16403, complete sequence
          Length = 172238

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 58   acatgaacatggacatacacatat 81
            ||||||||||| ||||||||||||
Sbjct: 4895 acatgaacatgaacatacacatat 4872
to top
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
              map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 58     acatgaacatggacatacacatat 81
              ||||||||||| ||||||||||||
Sbjct: 123589 acatgaacatgaacatacacatat 123566
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 58       acatgaacatggacatacacatat 81
                ||||||||||| ||||||||||||
Sbjct: 24888607 acatgaacatgaacatacacatat 24888584
to top
>gb|AC113454.8| Mus musculus chromosome 3, clone RP24-176I19, complete sequence
          Length = 171480

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    aaataagaaagataaatgga 111
             ||||||||||||||||||||
Sbjct: 75761 aaataagaaagataaatgga 75742
to top
>ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 protein phosphatase
           (CNI04270) partial mRNA
          Length = 3071

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 aaacccaaagcaatgtcaga 137
           ||||||||||||||||||||
Sbjct: 80  aaacccaaagcaatgtcaga 99
to top
>emb|AL513485.10| Human DNA sequence from clone RP11-48O20 on chromosome 1 Contains the
             TAGLN2 gene for transgelin 2, the IGSF9 gene for
             immunoglobulin superfamily member 9, the SLAMF9 gene for
             SLAM family member 9, a novel gene and three CpG islands,
             complete sequence
          Length = 80398

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aaagataaatggagaaggaa 118
             ||||||||||||||||||||
Sbjct: 46055 aaagataaatggagaaggaa 46074
to top
>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete
              sequence
          Length = 175757

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    aaaactgcaatggcacttta 163
              ||||||||||||||||||||
Sbjct: 166594 aaaactgcaatggcacttta 166575
to top
>emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chromosome 1 Contains part of
             the DAB1 gene for disabled homolog 1 (Drosophila),
             complete sequence
          Length = 134011

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 134   cagagttgacaaaactgcaatggc 157
             |||||||||||||||| |||||||
Sbjct: 88758 cagagttgacaaaactacaatggc 88735
to top
>gb|AC073617.16| Homo sapiens Xp BAC RP11-413F15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 151302

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 74   acacatattcttaggaacaaataagaaa 101
            |||||||||||||| |||||| ||||||
Sbjct: 9178 acacatattcttagtaacaaaaaagaaa 9151
to top
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gaacaaataagaaagataaa 107
             ||||||||||||||||||||
Sbjct: 45388 gaacaaataagaaagataaa 45407
to top
>gb|AC163014.5| Mus musculus chromosome 8, clone RP23-216D14, complete sequence
          Length = 208407

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    aagataaatggagaaggaaa 119
              ||||||||||||||||||||
Sbjct: 190875 aagataaatggagaaggaaa 190894
to top
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    atgaacatggacatacacatattc 83
             |||||||||| |||||||||||||
Sbjct: 31202 atgaacatgggcatacacatattc 31225
to top
>dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330038M22
           product:unclassifiable, full insert sequence
          Length = 3845

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 56  gtacatgaacatggacatacacatattc 83
           ||||||||||||| ||||| ||||||||
Sbjct: 695 gtacatgaacatgtacatatacatattc 722
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     gataaatggagaaggaaaac 121
               ||||||||||||||||||||
Sbjct: 4847879 gataaatggagaaggaaaac 4847860
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 58       acatgaacatggacatacacatat 81
                ||||||||||| ||||||||||||
Sbjct: 11682609 acatgaacatgaacatacacatat 11682586



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 58       acatgaacatggacatacacatat 81
                ||||||||||| ||||||||||||
Sbjct: 10428734 acatgaacatgaacatacacatat 10428757
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 58       acatgaacatggacatacacatat 81
                ||||||||||| ||||||||||||
Sbjct: 24979677 acatgaacatgaacatacacatat 24979654
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 111     agaaggaaaacccaaagcaa 130
               ||||||||||||||||||||
Sbjct: 1491873 agaaggaaaacccaaagcaa 1491854
to top
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1026E06
          Length = 162784

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 58   acatgaacatggacatacacatat 81
            ||||||||||| ||||||||||||
Sbjct: 5348 acatgaacatgaacatacacatat 5371
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>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005N06
          Length = 140639

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    acatgaacatggacatacacatat 81
             ||||||||||| ||||||||||||
Sbjct: 31151 acatgaacatgaacatacacatat 31128
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>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120825

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   gataaatggagaaggaaaac 121
             ||||||||||||||||||||
Sbjct: 90543 gataaatggagaaggaaaac 90562
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>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0576F08
          Length = 135314

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   agaaggaaaacccaaagcaa 130
             ||||||||||||||||||||
Sbjct: 55294 agaaggaaaacccaaagcaa 55275
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>gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, complete sequence
          Length = 178228

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    aagataaatggagaaggaaa 119
              ||||||||||||||||||||
Sbjct: 104567 aagataaatggagaaggaaa 104586
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     gataaatggagaaggaaaac 121
               ||||||||||||||||||||
Sbjct: 4847860 gataaatggagaaggaaaac 4847841
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>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141053

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gataaatggagaaggaaaac 121
              ||||||||||||||||||||
Sbjct: 112081 gataaatggagaaggaaaac 112100
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>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete
             sequence
          Length = 201821

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    atgaacatggacatacacat 79
             ||||||||||||||||||||
Sbjct: 17489 atgaacatggacatacacat 17470
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>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence
          Length = 208713

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 56    gtacatgaacatggacatacacatattc 83
             ||||||||||||| ||||| ||||||||
Sbjct: 68296 gtacatgaacatgtacatatacatattc 68323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,586,297
Number of Sequences: 3902068
Number of extensions: 2586297
Number of successful extensions: 51916
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51733
Number of HSP's gapped (non-prelim): 176
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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