>gb|AC109299.10| Mus musculus chromosome 1, clone RP24-302F18, complete sequence
          Length = 141796

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 299   tgcttctatgttgaaggccctg 320
             ||||||||||||||||||||||
Sbjct: 47673 tgcttctatgttgaaggccctg 47694

>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 380   gctgttgccgcagctgctgcc 400
             |||||||||||||||||||||
Sbjct: 36532 gctgttgccgcagctgctgcc 36512

>gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, complete sequence
          Length = 167971

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 282    actgtttgctcatcctttgcttcta 306
              |||| ||||||||||||||||||||
Sbjct: 117475 actgcttgctcatcctttgcttcta 117451

>emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 in linkage group 23,
             complete sequence
          Length = 156938

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   tctgaagagttgccaaaattc 184
             |||||||||||||||||||||
Sbjct: 66551 tctgaagagttgccaaaattc 66531

>gb|AF126378.1|MMPOLE02 Mus musculus DNA polymerase epsilon catalytic subunit (Pole) gene,
            exons 2 through 12
          Length = 7538

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 282  actgtttgctcatcctttgcttcta 306
            |||| ||||||||||||||||||||
Sbjct: 1048 actgcttgctcatcctttgcttcta 1072

>emb|BX001042.4| Zebrafish DNA sequence from clone CH211-146D6, complete sequence
          Length = 168195

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 31    caaacacctcataaattagctagtg 55
             ||||||||||||||||| |||||||
Sbjct: 91973 caaacacctcataaattcgctagtg 91997

>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tcgtctggttcatgccaaag 223
             ||||||||||||||||||||
Sbjct: 62915 tcgtctggttcatgccaaag 62934

>ref|XM_511928.1| PREDICTED: Pan troglodytes LOC455177 (LOC455177), mRNA
          Length = 2472

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  gctgttgccgcagctgctgc 399
            ||||||||||||||||||||
Sbjct: 1234 gctgttgccgcagctgctgc 1215

>gb|AC115843.10| Mus musculus chromosome 9, clone RP24-239P6, complete sequence
          Length = 215265

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 146    aagatgccaaccaagttctctgaa 169
              ||||||||||||||| ||||||||
Sbjct: 103242 aagatgccaaccaagatctctgaa 103219

>emb|CR382386.8| Zebrafish DNA sequence from clone DKEY-111O10 in linkage group 14,
              complete sequence
          Length = 162528

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ataaattagctagtgcactc 60
              ||||||||||||||||||||
Sbjct: 140321 ataaattagctagtgcactc 140302

>emb|BX908387.8| Zebrafish DNA sequence from clone DKEY-45B6 in linkage group 3,
             complete sequence
          Length = 212624

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   acttgcttttacacacaaaa 119
             ||||||||||||||||||||
Sbjct: 72694 acttgcttttacacacaaaa 72675

>gb|AC116478.14| Mus musculus chromosome 8, clone RP23-396E23, complete sequence
          Length = 193468

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    ttctctgaagagttgccaaaattc 184
              ||||||||| ||||||||||||||
Sbjct: 142965 ttctctgaaaagttgccaaaattc 142988

>gb|AC156993.3| Mus musculus chromosome 8, clone RP23-79L16, complete sequence
          Length = 145880

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 161   ttctctgaagagttgccaaaattc 184
             ||||||||| ||||||||||||||
Sbjct: 94450 ttctctgaaaagttgccaaaattc 94427

>gb|AC159098.6| Mus musculus chromosome 8, clone RP24-391C9, complete sequence
          Length = 184137

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 161  ttctctgaagagttgccaaaattc 184
            ||||||||| ||||||||||||||
Sbjct: 3450 ttctctgaaaagttgccaaaattc 3427

>emb|BX323012.5| Zebrafish DNA sequence from clone DKEYP-46F3, complete sequence
          Length = 175238

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ataaattagctagtgcactc 60
             ||||||||||||||||||||
Sbjct: 24850 ataaattagctagtgcactc 24869

>gb|AC015674.12| Homo sapiens chromosome 17, clone RP11-138C9, complete sequence
          Length = 187822

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   gctgttgccgcagctgctgc 399
             ||||||||||||||||||||
Sbjct: 98330 gctgttgccgcagctgctgc 98349

>emb|BX569789.4| Zebrafish DNA sequence from clone DKEY-68O6 in linkage group 3, complete
              sequence
          Length = 244662

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    acttgcttttacacacaaaa 119
              ||||||||||||||||||||
Sbjct: 116003 acttgcttttacacacaaaa 116022

>emb|BX005166.14| Zebrafish DNA sequence from clone CH211-137K18 in linkage group 3,
             complete sequence
          Length = 178013

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   ctgctgcccaccttaagact 412
             ||||||||||||||||||||
Sbjct: 79263 ctgctgcccaccttaagact 79282

>gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, complete sequence
          Length = 188240

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 375   tgggagctgttgccgcagctgctgccca 402
             ||||||||| |||||| |||||||||||
Sbjct: 98751 tgggagctgctgccgctgctgctgccca 98724

>gb|AC090629.8| Homo sapiens 12 BAC RP11-410B16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159240

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    cagctgctcttctccaccat 269
              ||||||||||||||||||||
Sbjct: 117270 cagctgctcttctccaccat 117251

>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     catgccaaagccatagatat 233
               ||||||||||||||||||||
Sbjct: 1332661 catgccaaagccatagatat 1332680

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 443     gcgtggtgcacagcatgccgaccg 466
               ||||||||| ||||||||||||||
Sbjct: 4221665 gcgtggtgcgcagcatgccgaccg 4221688

>dbj|AB018318.1| Homo sapiens mRNA for KIAA0775 protein, partial cds
          Length = 4121

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  gctgttgccgcagctgctgc 399
            ||||||||||||||||||||
Sbjct: 1366 gctgttgccgcagctgctgc 1347

>gb|AY105606.1| Zea mays PCO105510 mRNA sequence
          Length = 854

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 442 tgcgtggtgcacagcatgccgacc 465
           |||||||||||| |||||||||||
Sbjct: 275 tgcgtggtgcactgcatgccgacc 252

>dbj|AP006253.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-85A6, complete
              sequence
          Length = 130487

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 375    tgggagctgttgccgcagctgctgccca 402
              ||||||||| |||||| |||||||||||
Sbjct: 118017 tgggagctgctgccgctgctgctgccca 118044

>ref|NM_014726.1| Homo sapiens TBK1 binding protein 1 (TBKBP1), mRNA
          Length = 4121

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  gctgttgccgcagctgctgc 399
            ||||||||||||||||||||
Sbjct: 1366 gctgttgccgcagctgctgc 1347

>gb|AC145926.4| Gallus gallus BAC clone CH261-29I12 from chromosome unknown, complete
              sequence
          Length = 224974

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 150    tgccaaccaagttctctgaagagt 173
              |||||| |||||||||||||||||
Sbjct: 168758 tgccaaacaagttctctgaagagt 168781

>emb|AL929336.12| Zebrafish DNA sequence from clone CH211-163J21, complete sequence
          Length = 156284

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ataaattagctagtgcactc 60
             ||||||||||||||||||||
Sbjct: 53560 ataaattagctagtgcactc 53541

>gb|AC124074.2| Homo sapiens chromosome 8, clone RP11-781O9, complete sequence
          Length = 180673

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 375    tgggagctgttgccgcagctgctgccca 402
              ||||||||| |||||| |||||||||||
Sbjct: 118829 tgggagctgctgccgctgctgctgccca 118802

>dbj|AB020861.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 4/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 375   tgggagctgttgccgcagctgctgccca 402
             ||||||||| |||||| |||||||||||
Sbjct: 46790 tgggagctgctgccgctgctgctgccca 46817


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,140,328
Number of Sequences: 3902068
Number of extensions: 4140328
Number of successful extensions: 75280
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75196
Number of HSP's gapped (non-prelim): 84
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)