ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20g17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
2dbj|AK061587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
3gb|AF320027.1|AF320027 Sorghum bicolor heme oxygenase 2 (HO2) mR... 159 1e-35
4gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 2e-16
6gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 96 2e-16
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
8ref|XM_470854.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
9gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Canc... 42 2.2
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
12dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
13dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
14dbj|AK105248.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
15dbj|AK104955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
16dbj|AK068856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
17gb|AC153822.13| Mus musculus 10 BAC RP23-56N1 (Roswell Park Canc... 42 2.2
18emb|AL672038.7| Mouse DNA sequence from clone RP23-317H19 on chr... 42 2.2
19gb|AC170598.2| Mus musculus BAC clone RP23-349D13 from chromosom... 40 8.5
20gb|AC169677.2| Mus musculus BAC clone RP23-442J18 from chromosom... 40 8.5
21gb|AC166365.4| Mus musculus BAC clone RP24-428H14 from chromosom... 40 8.5
22gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 8.5
23gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, comp... 40 8.5
24gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome... 40 8.5
25gb|AC133210.3| Mus musculus chromosome UNK clone RP23-27L12, com... 40 8.5
26gb|BC043986.1| Xenopus laevis hypothetical protein MGC53945, mRN... 40 8.5
27emb|X64330.1|HSATPCITL H.sapiens mRNA for ATP-citrate lyase 40 8.5
28gb|AC113134.5| Homo sapiens chromosome 8, clone RP11-1031I13, co... 40 8.5
29gb|AC026005.7| Homo sapiens chromosome 8, clone RP11-470I23, com... 40 8.5
30gb|AF320024.1|AF320024 Glycine max heme oxygenase 1 (HO1) mRNA, ... 40 8.5
31gb|AC083814.17|AC083814 Mus musculus 7 BAC RP23-129J16 (Roswell ... 40 8.5
32gb|AC146659.3| Otolemur garnettii clone CH256-432E12, complete s... 40 8.5
33gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, comple... 40 8.5
34gb|AC073050.5| Homo sapiens BAC clone RP11-70E4 from 2, complete... 40 8.5
35emb|BX530035.7| Zebrafish DNA sequence from clone CH211-257I19 i... 40 8.5
36dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.5
37dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.5
38gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, c... 40 8.5
39gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromoso... 40 8.5
40emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA sequence BAC C-2... 40 8.5 
>dbj|AK073283.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029D12, full
            insert sequence
          Length = 1574

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Minus

                                                                        
Query: 427  acaatccgccccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcc 486
            |||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 1017 acaatccgccccaaatgctggaaacattttgcagcttctttcaagcacaagttcctgtcc 958

                                                                        
Query: 487  tttcgagaccagtgcttgctaagctcattaagcttctccctagcatcctttagtaaaatc 546
            || |||||||| ||||||||||| || |||||||||||||| | ||| ||||| ||||  
Sbjct: 957  ttccgagaccaatgcttgctaagttcgttaagcttctccctggtatcttttagcaaaagt 898

                                                                 
Query: 547  tctgggtcagaatcccatttgtagaactccagcagtcttccttccaaaatttt 599
            |||   ||||||||||||||||| ||||| |||   |||||||||||||||||
Sbjct: 897  tctacatcagaatcccatttgtaaaactctagctcccttccttccaaaatttt 845
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>dbj|AK061587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F06, full
           insert sequence
          Length = 882

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Minus

                                                                       
Query: 427 acaatccgccccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcc 486
           |||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 329 acaatccgccccaaatgctggaaacattttgcagcttctttcaagcacaagttcctgtcc 270

                                                                       
Query: 487 tttcgagaccagtgcttgctaagctcattaagcttctccctagcatcctttagtaaaatc 546
           || |||||||| ||||||||||| || |||||||||||||| | ||| ||||| ||||  
Sbjct: 269 ttccgagaccaatgcttgctaagttcgttaagcttctccctggtatcttttagcaaaagt 210

                                                                
Query: 547 tctgggtcagaatcccatttgtagaactccagcagtcttccttccaaaatttt 599
           |||   ||||||||||||||||| ||||| |||   |||||||||||||||||
Sbjct: 209 tctacatcagaatcccatttgtaaaactctagctcccttccttccaaaatttt 157
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>gb|AF320027.1|AF320027 Sorghum bicolor heme oxygenase 2 (HO2) mRNA, partial cds; nuclear
           gene for chloroplast product
          Length = 1444

 Score =  159 bits (80), Expect = 1e-35
 Identities = 143/164 (87%)
 Strand = Plus / Minus

                                                                       
Query: 436 cccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcctttcgagac 495
           |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 959 cccaagtactggaagcattttgcagcttctttcaagcacaagttcctgtccttccgagtc 900

                                                                       
Query: 496 cagtgcttgctaagctcattaagcttctccctagcatcctttagtaaaatctctgggtca 555
           ||||||||||| |||||||| ||||||||||| ||||| |||| || ||  || |  |||
Sbjct: 899 cagtgcttgctgagctcattcagcttctccctggcatcttttaatagaagttcagcatca 840

                                                       
Query: 556 gaatcccatttgtagaactccagcagtcttccttccaaaatttt 599
           | |||||| |||||||||||||||   |||||||||| ||||||
Sbjct: 839 gtatcccacttgtagaactccagctcccttccttccagaatttt 796
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>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                         
Query: 427   acaatccgccccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcc 486
             |||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24616 acaatccgccccaaatgctggaaacattttgcagcttctttcaagcacaagttcctgtcc 24675

                             
Query: 487   tttcgagaccagtgct 502
             || |||||||| ||||
Sbjct: 24676 ttccgagaccaatgct 24691



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                         
Query: 501   cttgctaagctcattaagcttctccctagcatcctttagtaaaatctctgggtcagaatc 560
             ||||||||| || |||||||||||||| | ||| ||||| ||||  |||   ||||||||
Sbjct: 24802 cttgctaagttcgttaagcttctccctggtatcttttagcaaaagttctacatcagaatc 24861

                                                    
Query: 561   ccatttgtagaactccagcagtcttccttccaaaatttt 599
             ||||||||| ||||| |||   |||||||||||||||||
Sbjct: 24862 ccatttgtaaaactctagctcccttccttccaaaatttt 24900
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                            
Query: 427      acaatccgccccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcc 486
                |||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 15762816 acaatccgccccaaatgctggaaacattttgcagcttctttcaagcacaagttcctgtcc 15762875

                                
Query: 487      tttcgagaccagtgct 502
                || |||||||| ||||
Sbjct: 15762876 ttccgagaccaatgct 15762891



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                            
Query: 501      cttgctaagctcattaagcttctccctagcatcctttagtaaaatctctgggtcagaatc 560
                ||||||||| || |||||||||||||| | ||| ||||| ||||  |||   ||||||||
Sbjct: 15763002 cttgctaagttcgttaagcttctccctggtatcttttagcaaaagttctacatcagaatc 15763061

                                                       
Query: 561      ccatttgtagaactccagcagtcttccttccaaaatttt 599
                ||||||||| ||||| |||   |||||||||||||||||
Sbjct: 15763062 ccatttgtaaaactctagctcccttccttccaaaatttt 15763100
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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
              sequence
          Length = 178748

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                          
Query: 427    acaatccgccccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcc 486
              |||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 172770 acaatccgccccaaatgctggaaacattttgcagcttctttcaagcacaagttcctgtcc 172829

                              
Query: 487    tttcgagaccagtgct 502
              || |||||||| ||||
Sbjct: 172830 ttccgagaccaatgct 172845



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                          
Query: 501    cttgctaagctcattaagcttctccctagcatcctttagtaaaatctctgggtcagaatc 560
              ||||||||| || |||||||||||||| | ||| ||||| ||||  |||   ||||||||
Sbjct: 172956 cttgctaagttcgttaagcttctccctggtatcttttagcaaaagttctacatcagaatc 173015

                                                     
Query: 561    ccatttgtagaactccagcagtcttccttccaaaatttt 599
              ||||||||| ||||| |||   |||||||||||||||||
Sbjct: 173016 ccatttgtaaaactctagctcccttccttccaaaatttt 173054
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                            
Query: 427      acaatccgccccatgtactgaaagcattttgcagcttctttcaagcacaagttcctgtcc 486
                |||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 15757350 acaatccgccccaaatgctggaaacattttgcagcttctttcaagcacaagttcctgtcc 15757409

                                
Query: 487      tttcgagaccagtgct 502
                || |||||||| ||||
Sbjct: 15757410 ttccgagaccaatgct 15757425



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                            
Query: 501      cttgctaagctcattaagcttctccctagcatcctttagtaaaatctctgggtcagaatc 560
                ||||||||| || |||||||||||||| | ||| ||||| ||||  |||   ||||||||
Sbjct: 15757536 cttgctaagttcgttaagcttctccctggtatcttttagcaaaagttctacatcagaatc 15757595

                                                       
Query: 561      ccatttgtagaactccagcagtcttccttccaaaatttt 599
                ||||||||| ||||| |||   |||||||||||||||||
Sbjct: 15757596 ccatttgtaaaactctagctcccttccttccaaaatttt 15757634
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>ref|XM_470854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                       
Query: 500 gcttgctaagctcattaagcttctccctagcatcctttagtaaaatctctgggtcagaat 559
           |||||||||| || |||||||||||||| | ||| ||||| ||||  |||   |||||||
Sbjct: 901 gcttgctaagttcgttaagcttctccctggtatcttttagcaaaagttctacatcagaat 842

                                                   
Query: 560 cccatttgtagaactccagcagtcttccttccaaaatttt 599
           |||||||||| ||||| |||   |||||||||||||||||
Sbjct: 841 cccatttgtaaaactctagctcccttccttccaaaatttt 802
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>gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 176428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 447    aaagcattttgcagcttcttt 467
              |||||||||||||||||||||
Sbjct: 107333 aaagcattttgcagcttcttt 107353
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 559      tcccatttgtagaactccagc 579
                |||||||||||||||||||||
Sbjct: 23470557 tcccatttgtagaactccagc 23470577
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 579     cagtcttccttccaaaatttt 599
               |||||||||||||||||||||
Sbjct: 7094222 cagtcttccttccaaaatttt 7094202
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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0452F10
          Length = 145120

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 579   cagtcttccttccaaaatttt 599
             |||||||||||||||||||||
Sbjct: 81802 cagtcttccttccaaaatttt 81782
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>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0486H12
          Length = 179085

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 559    tcccatttgtagaactccagc 579
              |||||||||||||||||||||
Sbjct: 130112 tcccatttgtagaactccagc 130132
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>dbj|AK105248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A12, full
            insert sequence
          Length = 2448

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 579  cagtcttccttccaaaatttt 599
            |||||||||||||||||||||
Sbjct: 2355 cagtcttccttccaaaatttt 2335
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>dbj|AK104955.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A03, full
            insert sequence
          Length = 1334

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 559  tcccatttgtagaactccagc 579
            |||||||||||||||||||||
Sbjct: 1011 tcccatttgtagaactccagc 991
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>dbj|AK068856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O03, full
            insert sequence
          Length = 1331

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 559  tcccatttgtagaactccagc 579
            |||||||||||||||||||||
Sbjct: 1019 tcccatttgtagaactccagc 999
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>gb|AC153822.13| Mus musculus 10 BAC RP23-56N1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217746

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   aaagcattttgcagcttcttt 467
             |||||||||||||||||||||
Sbjct: 25479 aaagcattttgcagcttcttt 25459
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>emb|AL672038.7| Mouse DNA sequence from clone RP23-317H19 on chromosome X, complete
              sequence
          Length = 181127

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 576    cagcagtcttccttccaaaat 596
              |||||||||||||||||||||
Sbjct: 127101 cagcagtcttccttccaaaat 127121
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>gb|AC170598.2| Mus musculus BAC clone RP23-349D13 from chromosome 9, complete sequence
          Length = 217146

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ctccatatataaggaagaag 139
             ||||||||||||||||||||
Sbjct: 16955 ctccatatataaggaagaag 16974
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>gb|AC169677.2| Mus musculus BAC clone RP23-442J18 from chromosome 8, complete sequence
          Length = 225815

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    agaagcaaggcaggaagtag 154
              ||||||||||||||||||||
Sbjct: 149578 agaagcaaggcaggaagtag 149559
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>gb|AC166365.4| Mus musculus BAC clone RP24-428H14 from chromosome 9, complete sequence
          Length = 172948

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ctccatatataaggaagaag 139
              ||||||||||||||||||||
Sbjct: 117668 ctccatatataaggaagaag 117687
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 130     aaggaagaagcaaggcagga 149
               ||||||||||||||||||||
Sbjct: 1334247 aaggaagaagcaaggcagga 1334266
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>gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, complete sequence
          Length = 208461

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aagttgtaatcctttacatt 116
             ||||||||||||||||||||
Sbjct: 72292 aagttgtaatcctttacatt 72311
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>gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome 10, complete sequence
          Length = 183477

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 583    cttccttccaaaattttgtc 602
              ||||||||||||||||||||
Sbjct: 170903 cttccttccaaaattttgtc 170884
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>gb|AC133210.3| Mus musculus chromosome UNK clone RP23-27L12, complete sequence
          Length = 210702

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 583  cttccttccaaaattttgtc 602
            ||||||||||||||||||||
Sbjct: 4434 cttccttccaaaattttgtc 4415
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>gb|BC043986.1| Xenopus laevis hypothetical protein MGC53945, mRNA (cDNA clone
           MGC:53945 IMAGE:5570385), complete cds
          Length = 775

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 agaaagatgaaactgcagta 332
           ||||||||||||||||||||
Sbjct: 407 agaaagatgaaactgcagta 426
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>emb|X64330.1|HSATPCITL H.sapiens mRNA for ATP-citrate lyase
          Length = 4297

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  tatataaggaagaagcaagg 144
            ||||||||||||||||||||
Sbjct: 3873 tatataaggaagaagcaagg 3854
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>gb|AC113134.5| Homo sapiens chromosome 8, clone RP11-1031I13, complete sequence
          Length = 178804

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   aactgaagcctctagagaga 387
             ||||||||||||||||||||
Sbjct: 16091 aactgaagcctctagagaga 16110
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>gb|AC026005.7| Homo sapiens chromosome 8, clone RP11-470I23, complete sequence
          Length = 173839

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    aactgaagcctctagagaga 387
              ||||||||||||||||||||
Sbjct: 154079 aactgaagcctctagagaga 154098
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>gb|AF320024.1|AF320024 Glycine max heme oxygenase 1 (HO1) mRNA, partial cds; nuclear gene
           for chloroplast product
          Length = 931

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 558 atcccatttgtagaactcca 577
           ||||||||||||||||||||
Sbjct: 604 atcccatttgtagaactcca 585
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>gb|AC083814.17|AC083814 Mus musculus 7 BAC RP23-129J16 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 191410

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    acagtatattgatatttggtactc 49
             |||||||| |||||||||||||||
Sbjct: 57164 acagtatagtgatatttggtactc 57187
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>gb|AC146659.3| Otolemur garnettii clone CH256-432E12, complete sequence
          Length = 86405

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaggaagaagcaaggcagga 149
             ||||||||||||||||||||
Sbjct: 54003 aaggaagaagcaaggcagga 54022
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>gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, complete sequence
          Length = 195880

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    ctgtctctagaaagatgaaa 324
              ||||||||||||||||||||
Sbjct: 162315 ctgtctctagaaagatgaaa 162334
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>gb|AC073050.5| Homo sapiens BAC clone RP11-70E4 from 2, complete sequence
          Length = 135586

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 301   aacactgtctctagaaagatgaaactgc 328
             ||||||||||||||||| | ||||||||
Sbjct: 36469 aacactgtctctagaaaaaagaaactgc 36442
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>emb|BX530035.7| Zebrafish DNA sequence from clone CH211-257I19 in linkage group 21,
              complete sequence
          Length = 179729

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    aatcctttacattattctcc 123
              ||||||||||||||||||||
Sbjct: 140324 aatcctttacattattctcc 140305
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>dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2528N2, complete
             sequences
          Length = 208600

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   aaacactgtctctagaaaga 319
             ||||||||||||||||||||
Sbjct: 19871 aaacactgtctctagaaaga 19852
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>dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete
              sequence
          Length = 163025

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    aaacactgtctctagaaaga 319
              ||||||||||||||||||||
Sbjct: 128974 aaacactgtctctagaaaga 128955
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>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence
          Length = 195993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   ctttacattattctccatat 127
             ||||||||||||||||||||
Sbjct: 41378 ctttacattattctccatat 41359
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>gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromosome unknown, complete
              sequence
          Length = 192198

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    tgcagtaagcctcgagcttt 345
              ||||||||||||||||||||
Sbjct: 162141 tgcagtaagcctcgagcttt 162160
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>emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA sequence BAC C-2216L14 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 120571

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   agaaagaaaacactgtctct 312
             ||||||||||||||||||||
Sbjct: 25316 agaaagaaaacactgtctct 25335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,697,223
Number of Sequences: 3902068
Number of extensions: 5697223
Number of successful extensions: 105591
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105350
Number of HSP's gapped (non-prelim): 233
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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