ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20g14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468400.1| Oryza sativa (japonica cultivar-group), mRNA 285 8e-74
2dbj|AK058624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 8e-74
3dbj|AK071389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
4gb|AY112358.1| Zea mays CL26230_1 mRNA sequence 194 2e-46
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
6dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
7gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete s... 44 0.51
8gb|AC010221.8| Homo sapiens chromosome 5 clone CTC-262J4, comple... 44 0.51
9gb|AC026783.5| Homo sapiens chromosome 5 clone CTD-2129A22, comp... 44 0.51
10gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome... 42 2.0
11gb|AC132424.3| Mus musculus BAC clone RP23-310P13 from chromosom... 42 2.0
12gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom... 42 2.0
13gb|AC124418.4| Mus musculus BAC clone RP24-318G17 from chromosom... 42 2.0
14gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome... 42 2.0
15emb|BX784395.1| Human DNA sequence from clone RP5-1190M18 on chr... 42 2.0
16emb|BX682532.4| Human DNA sequence from clone WI2-801539E12 on c... 42 2.0
17emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chr... 42 2.0
18emb|AL078597.11|HSDJ442I1 Human DNA sequence from clone RP3-442I... 42 2.0
19gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cance... 42 2.0
20gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Canc... 42 2.0
21gb|AC009300.2| Homo sapiens BAC clone RP11-52A21 from 2, complet... 42 2.0
22emb|X54399.1|RDU6RNA R.dacryoidum intron from U6 small nuclear R... 42 2.0
23gb|AC132374.4| Mus musculus BAC clone RP24-69E21 from 10, comple... 42 2.0
24emb|AL445229.12| Human DNA sequence from clone RP5-1190M18 on ch... 42 2.0
25emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on ch... 42 2.0
26gb|AC101722.14| Mus musculus chromosome 5, clone RP23-310L24, co... 40 8.0
27gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosom... 40 8.0
28ref|NG_002392.2| Homo sapiens major histocompatibility complex, ... 40 8.0
29ref|NG_002432.1| Homo sapiens major histocompatibility complex, ... 40 8.0
30gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, comp... 40 8.0
31gb|AF125313.2| Mus musculus chromosome X clones CT7-508o14, CT7-... 40 8.0
32ref|NM_001001182.2| Mus musculus bromodomain adjacent to zinc fi... 40 8.0
33gb|AC135509.2| Mus musculus BAC clone RP24-448I12 from chromosom... 40 8.0
34ref|XM_654351.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.0
35gb|AC117702.10| Mus musculus chromosome 10, clone RP23-464I2, co... 40 8.0
36gb|AC115805.12| Mus musculus chromosome 10, clone RP23-412P24, c... 40 8.0
37gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosom... 40 8.0
38gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome... 40 8.0
39gb|AC117210.3| Mus musculus BAC clone RP23-286E20 from 10, compl... 40 8.0
40gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, comple... 40 8.0
41ref|XM_645641.1| Entamoeba histolytica HM-1:IMSS V-type ATPase, ... 40 8.0
42ref|XM_646506.1| Entamoeba histolytica HM-1:IMSS V-type ATPase, ... 40 8.0
43gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, com... 40 8.0
44gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Ho... 40 8.0
45emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on ... 40 8.0
46emb|BX120007.9| Human DNA sequence from clone DASS-397D15 on chr... 40 8.0
47emb|AL929581.5| Human DNA sequence from clone DAQB-97F8 on chrom... 40 8.0
48emb|AL713966.7| Human DNA sequence from clone XXbac-161M6 on chr... 40 8.0
49emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on ch... 40 8.0
50emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chr... 40 8.0
51emb|AL080239.12|HSG256O22 Human DNA sequence from clone GS1-256O... 40 8.0
52emb|X15378.1|MMPO Mouse gene for the light and heavy chains of m... 40 8.0
53gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Canc... 40 8.0
54gb|AC008021.10| Homo sapiens chromosome 18, clone RP11-504H5, co... 40 8.0
55emb|BX927235.7| Human DNA sequence from clone DAMA-25D9 on chrom... 40 8.0
56emb|AL929409.5| Mouse DNA sequence from clone RP23-402H11 on chr... 40 8.0
57emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 ... 40 8.0
58gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosom... 40 8.0
59emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in... 40 8.0
60gb|AC090398.12| Homo sapiens chromosome 18, clone RP11-669I1, co... 40 8.0
61gb|AY282416.1| Homo sapiens Toll-interleukin 1 receptor (TIR) do... 40 8.0
62gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cance... 40 8.0
63gb|AC134333.3| Mus musculus BAC clone RP24-140M19 from chromosom... 40 8.0
64gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosom... 40 8.0
65dbj|AK051966.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 8.0
66gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Canc... 40 8.0
67emb|BX511165.4| Zebrafish DNA sequence from clone DKEY-22L14 in ... 40 8.0
68dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
69dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
70gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 40 8.0
71gb|AC080018.14|AC080018 Mus musculus 3 BAC RP23-200E11 (Roswell ... 40 8.0
72gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosom... 40 8.0
73gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complet... 40 8.0
74gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, comple... 40 8.0
75emb|BX296551.4| Zebrafish DNA sequence from clone CH211-224L10 i... 40 8.0
76gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, com... 40 8.0
77dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
78emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in l... 40 8.0
79emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chr... 40 8.0
80gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, ... 40 8.0
81gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Canc... 40 8.0
82gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, com... 40 8.0
83gb|AF068872.1|AF068872 Glycine curvata glutamine synthetase gene... 40 8.0
84gb|AC106797.2| Homo sapiens chromosome 5 clone RP11-433I2, compl... 40 8.0
85dbj|AP001318.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.0
86emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chr... 40 8.0
87gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
88emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chr... 40 8.0
89emb|AL833626.1|HSM804939 Homo sapiens mRNA; cDNA DKFZp686M1273 (... 40 8.0
90dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 8.0
91emb|CR788250.6| Human DNA sequence from clone DAMC-146E17 on chr... 40 8.0
92dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 8.0
93gb|BC042646.1| Mus musculus bromodomain adjacent to zinc finger ... 40 8.0
94gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complet... 40 8.0
95gb|BC053917.1| Mus musculus bromodomain adjacent to zinc finger ... 40 8.0
96gb|AC170262.2| Mus musculus BAC clone RP23-163J7 from chromosome... 40 8.0
97emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chr... 40 8.0
98emb|AL606745.11| Mouse DNA sequence from clone RP23-32L6 on chro... 40 8.0
99emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chr... 40 8.0
100emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from... 40 8.0
101emb|AL606832.4| Mouse DNA sequence from clone RP23-346G22 on chr... 40 8.0

>ref|XM_468400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2355

 Score =  285 bits (144), Expect = 8e-74
 Identities = 273/316 (86%)
 Strand = Plus / Minus

                                                                        
Query: 271  tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 330
            ||||||| |||| ||||||  | |||||||| |||||||||||||||| |||||||||||
Sbjct: 2197 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 2138

                                                                        
Query: 331  ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 390
            |||||||||||||||||| |||||  |  || ||||||||||||| |||||| |||   |
Sbjct: 2137 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 2078

                                                                        
Query: 391  gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 450
             |||||  | ||||||||||| ||||||||||| || ||||||||||||||| || || |
Sbjct: 2077 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 2018

                                                                        
Query: 451  tggctttcacaatctcatcaagaatgaactcccggaagaagtcacccctgtcagagagta 510
            ||||||| |||||||||||||||||||||||||  || ||||| ||||| ||||||||||
Sbjct: 2017 tggctttgacaatctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagta 1958

                                                                        
Query: 511  gaaaagagagagcagcccgagctttgattggattttcaggttgggaaatggccattggga 570
            ||||||| ||||||||||||||||||| ||| |  ||||| || || ||||||||||| |
Sbjct: 1957 gaaaagaaagagcagcccgagctttgactggttgctcaggctgtgatatggccattggaa 1898

                            
Query: 571  atgcaggaactaaact 586
            ||||||||||||||||
Sbjct: 1897 atgcaggaactaaact 1882



 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                        
Query: 113  tcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggctcaagac 172
            |||||||||||| |||||||||| |||||| ||||| || |||||||||||||||| |||
Sbjct: 2355 tcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggctcatgac 2296

                                                                        
Query: 173  atctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcaccagaga 232
             ||||||||||||||||| || ||||| || | |||||||| ||||||||| || ||| |
Sbjct: 2295 ctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtacaagata 2236

                              
Query: 233  cacgacatttacgtcccc 250
            ||| |||||||| |||||
Sbjct: 2235 cacaacatttacatcccc 2218



to top

>dbj|AK058624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C01, full
           insert sequence
          Length = 1203

 Score =  285 bits (144), Expect = 8e-74
 Identities = 273/316 (86%)
 Strand = Plus / Minus

                                                                       
Query: 271 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 330
           ||||||| |||| ||||||  | |||||||| |||||||||||||||| |||||||||||
Sbjct: 718 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 659

                                                                       
Query: 331 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 390
           |||||||||||||||||| |||||  |  || ||||||||||||| |||||| |||   |
Sbjct: 658 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 599

                                                                       
Query: 391 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 450
            |||||  | ||||||||||| ||||||||||| || ||||||||||||||| || || |
Sbjct: 598 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 539

                                                                       
Query: 451 tggctttcacaatctcatcaagaatgaactcccggaagaagtcacccctgtcagagagta 510
           ||||||| |||||||||||||||||||||||||  || ||||| ||||| ||||||||||
Sbjct: 538 tggctttgacaatctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagta 479

                                                                       
Query: 511 gaaaagagagagcagcccgagctttgattggattttcaggttgggaaatggccattggga 570
           ||||||| ||||||||||||||||||| ||| |  ||||| || || ||||||||||| |
Sbjct: 478 gaaaagaaagagcagcccgagctttgactggttgctcaggctgtgatatggccattggaa 419

                           
Query: 571 atgcaggaactaaact 586
           ||||||||||||||||
Sbjct: 418 atgcaggaactaaact 403



 Score =  143 bits (72), Expect = 7e-31
 Identities = 126/144 (87%)
 Strand = Plus / Minus

                                                                       
Query: 107 atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 166
           |||||||||||||||||| |||||||||| |||||| ||||| || ||||||||||||||
Sbjct: 882 atcacttcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggct 823

                                                                       
Query: 167 caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 226
           || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| ||
Sbjct: 822 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 763

                                   
Query: 227 cagagacacgacatttacgtcccc 250
            ||| |||| |||||||| |||||
Sbjct: 762 aagatacacaacatttacatcccc 739



to top

>dbj|AK071389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091P22, full
           insert sequence
          Length = 895

 Score =  278 bits (140), Expect = 2e-71
 Identities = 272/316 (86%)
 Strand = Plus / Minus

                                                                       
Query: 271 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 330
           ||||||| |||| ||||||  | |||||||| |||||||||||||||| |||||||||||
Sbjct: 575 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 516

                                                                       
Query: 331 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 390
           |||||||||||||||||| |||||  |  || ||||||||||||| |||||| |||   |
Sbjct: 515 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 456

                                                                       
Query: 391 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 450
            |||||  | ||||||||||| ||||||||||| || ||||||||||||||| || || |
Sbjct: 455 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 396

                                                                       
Query: 451 tggctttcacaatctcatcaagaatgaactcccggaagaagtcacccctgtcagagagta 510
           ||||||| |||||||||||||||||||||||||  || ||||  ||||| ||||||||||
Sbjct: 395 tggctttgacaatctcatcaagaatgaactccctaaaaaagttgcccctctcagagagta 336

                                                                       
Query: 511 gaaaagagagagcagcccgagctttgattggattttcaggttgggaaatggccattggga 570
           ||||||| ||||||||||||||||||| ||| |  ||||| || || ||||||||||| |
Sbjct: 335 gaaaagaaagagcagcccgagctttgactggttgctcaggctgtgatatggccattggaa 276

                           
Query: 571 atgcaggaactaaact 586
           ||||||||||||||||
Sbjct: 275 atgcaggaactaaact 260



 Score =  135 bits (68), Expect = 2e-28
 Identities = 125/144 (86%)
 Strand = Plus / Minus

                                                                       
Query: 107 atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 166
           |||||||||||||||||| ||||||| || |||||| ||||| || ||||||||||||||
Sbjct: 739 atcacttcacaaaaatgcctcccggaccaaccgtgcaaatactcgcgatgacaaccggct 680

                                                                       
Query: 167 caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 226
           || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| ||
Sbjct: 679 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 620

                                   
Query: 227 cagagacacgacatttacgtcccc 250
            ||| |||| |||||||| |||||
Sbjct: 619 aagatacacaacatttacatcccc 596



to top

>gb|AY112358.1| Zea mays CL26230_1 mRNA sequence
          Length = 580

 Score =  194 bits (98), Expect = 2e-46
 Identities = 212/250 (84%)
 Strand = Plus / Plus

                                                                       
Query: 126 tcccggatcacccgtgcgaatacccgtgatgacaaccggctcaagacatctggtaggatc 185
           |||||||| | |||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 145 tcccggattatccgtgcaaatacccgtgacgacaaccggctcaagacatcaggtaggatc 204

                                                                       
Query: 186 ttcgatgagatgcttggtagcacaggtaaaagctcttgcaccagagacacgacatttacg 245
           ||||| ||||||| ||| | |||||||| |||||||||||||| |||||| || || |||
Sbjct: 205 ttcgacgagatgcctggcaacacaggtagaagctcttgcaccacagacaccacgttcacg 264

                                                                       
Query: 246 tccccgttgactgtttgatttgccgtcccagccgtcagaaacttggcgaccttctcgaca 305
           ||||||   |||||| || |||| ||||| |  ||||| |||||  | ||||||||||| 
Sbjct: 265 tccccgcccactgttggagttgcagtcccggatgtcaggaacttcacaaccttctcgacg 324

                                                                       
Query: 306 ttgttcaagatgatcctgtcttcctctgtgattgtaggaagcaatgctcccgacctcaca 365
           ||||||| ||||| |||||||||||||| ||| || ||||||||||| |  | ||| |||
Sbjct: 325 ttgttcaggatgaccctgtcttcctctgggatcgtcggaagcaatgccctggccctgaca 384

                     
Query: 366 ggaaccatgc 375
           ||||||||||
Sbjct: 385 ggaaccatgc 394



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                       
Query: 429 tgctcccttgaaaccgcgtcgatggctttcacaatctcatcaagaatgaactcccggaag 488
           ||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 448 tgctcccttgaaatcgcatcgatggctttcacaatctcgtcaagaataaactcccgaaag 507

                                       
Query: 489 aagtcacccctgtcagagagtagaaaag 516
           ||||      | ||||||||||||||||
Sbjct: 508 aagttnnnnntctcagagagtagaaaag 535



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  157 bits (79), Expect = 5e-35
 Identities = 166/195 (85%)
 Strand = Plus / Plus

                                                                            
Query: 271      tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 330
                ||||||| |||| ||||||  | |||||||| |||||||||||||||| |||||||||||
Sbjct: 35024025 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 35024084

                                                                            
Query: 331      ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 390
                |||||||||||||||||| |||||  |  || ||||||||||||| |||||| |||   |
Sbjct: 35024085 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 35024144

                                                                            
Query: 391      gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 450
                 |||||  | ||||||||||| ||||||||||| || ||||||||||||||| || || |
Sbjct: 35024145 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 35024204

                               
Query: 451      tggctttcacaatct 465
                ||||||| |||||||
Sbjct: 35024205 tggctttgacaatct 35024219



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                            
Query: 107      atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 166
                |||||||||||||||||| |||||||||| |||||| ||||| || ||||||||||||||
Sbjct: 35023728 atcacttcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggct 35023787

                                                                            
Query: 167      caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 226
                || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| ||
Sbjct: 35023788 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 35023847

                                  
Query: 227      cagagacacgacatttac 244
                 ||| |||| ||||||||
Sbjct: 35023848 aagatacacaacatttac 35023865



 Score =  133 bits (67), Expect = 7e-28
 Identities = 109/123 (88%)
 Strand = Plus / Plus

                                                                            
Query: 464      ctcatcaagaatgaactcccggaagaagtcacccctgtcagagagtagaaaagagagagc 523
                ||||||||||||||||||||  || ||||| ||||| ||||||||||||||||| |||||
Sbjct: 35024349 ctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagtagaaaagaaagagc 35024408

                                                                            
Query: 524      agcccgagctttgattggattttcaggttgggaaatggccattgggaatgcaggaactaa 583
                |||||||||||||| ||| |  ||||| || || ||||||||||| ||||||||||||||
Sbjct: 35024409 agcccgagctttgactggttgctcaggctgtgatatggccattggaaatgcaggaactaa 35024468

                   
Query: 584      act 586
                |||
Sbjct: 35024469 act 35024471



to top

>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643F09
          Length = 161001

 Score =  157 bits (79), Expect = 5e-35
 Identities = 166/195 (85%)
 Strand = Plus / Plus

                                                                         
Query: 271   tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 330
             ||||||| |||| ||||||  | |||||||| |||||||||||||||| |||||||||||
Sbjct: 84366 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 84425

                                                                         
Query: 331   ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 390
             |||||||||||||||||| |||||  |  || ||||||||||||| |||||| |||   |
Sbjct: 84426 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 84485

                                                                         
Query: 391   gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 450
              |||||  | ||||||||||| ||||||||||| || ||||||||||||||| || || |
Sbjct: 84486 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 84545

                            
Query: 451   tggctttcacaatct 465
             ||||||| |||||||
Sbjct: 84546 tggctttgacaatct 84560



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                         
Query: 107   atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 166
             |||||||||||||||||| |||||||||| |||||| ||||| || ||||||||||||||
Sbjct: 84069 atcacttcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggct 84128

                                                                         
Query: 167   caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 226
             || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| ||
Sbjct: 84129 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 84188

                               
Query: 227   cagagacacgacatttac 244
              ||| |||| ||||||||
Sbjct: 84189 aagatacacaacatttac 84206



 Score =  133 bits (67), Expect = 7e-28
 Identities = 109/123 (88%)
 Strand = Plus / Plus

                                                                         
Query: 464   ctcatcaagaatgaactcccggaagaagtcacccctgtcagagagtagaaaagagagagc 523
             ||||||||||||||||||||  || ||||| ||||| ||||||||||||||||| |||||
Sbjct: 84690 ctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagtagaaaagaaagagc 84749

                                                                         
Query: 524   agcccgagctttgattggattttcaggttgggaaatggccattgggaatgcaggaactaa 583
             |||||||||||||| ||| |  ||||| || || ||||||||||| ||||||||||||||
Sbjct: 84750 agcccgagctttgactggttgctcaggctgtgatatggccattggaaatgcaggaactaa 84809

                
Query: 584   act 586
             |||
Sbjct: 84810 act 84812



to top

>gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete sequence
          Length = 88701

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 200   tggtagcacaggtaaaagctct 221
             ||||||||||||||||||||||
Sbjct: 71224 tggtagcacaggtaaaagctct 71203



to top

>gb|AC010221.8| Homo sapiens chromosome 5 clone CTC-262J4, complete sequence
          Length = 101937

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 395   tctgaccccaaaagatgaagca 416
             ||||||||||||||||||||||
Sbjct: 66996 tctgaccccaaaagatgaagca 66975



to top

>gb|AC026783.5| Homo sapiens chromosome 5 clone CTD-2129A22, complete sequence
          Length = 200232

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 395   tctgaccccaaaagatgaagca 416
             ||||||||||||||||||||||
Sbjct: 10391 tctgaccccaaaagatgaagca 10412



to top

>gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome 7, complete sequence
          Length = 165198

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    cagaaggaaaacaaaactgag 106
             |||||||||||||||||||||
Sbjct: 75277 cagaaggaaaacaaaactgag 75297



to top

>gb|AC132424.3| Mus musculus BAC clone RP23-310P13 from chromosome 15, complete sequence
          Length = 199655

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 26     gtgtatgtgtgtgtagtttgtataa 50
              |||||||||||||| ||||||||||
Sbjct: 156859 gtgtatgtgtgtgttgtttgtataa 156835



to top

>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    aaaaggaaaaaggagaaataa 69
             |||||||||||||||||||||
Sbjct: 18352 aaaaggaaaaaggagaaataa 18332



to top

>gb|AC124418.4| Mus musculus BAC clone RP24-318G17 from chromosome 18, complete sequence
          Length = 167998

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     tagtttgtataaaaggaaaaa 59
              |||||||||||||||||||||
Sbjct: 152043 tagtttgtataaaaggaaaaa 152023



to top

>gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome 18, complete sequence
          Length = 194291

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     tagtttgtataaaaggaaaaa 59
              |||||||||||||||||||||
Sbjct: 107480 tagtttgtataaaaggaaaaa 107460



to top

>emb|BX784395.1| Human DNA sequence from clone RP5-1190M18 on chromosome 1 Contains
            part of the VPS13D gene for vacuolar protein sorting 13D
            (yeast), complete sequence
          Length = 4359

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 421  gtagcaattgctcccttgaaa 441
            |||||||||||||||||||||
Sbjct: 3263 gtagcaattgctcccttgaaa 3283



to top

>emb|BX682532.4| Human DNA sequence from clone WI2-801539E12 on chromosome 1
           Contains part of the VPS13D gene for vacuolar protein
           sorting 13D (yeast), complete sequence
          Length = 41821

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 gtagcaattgctcccttgaaa 441
           |||||||||||||||||||||
Sbjct: 904 gtagcaattgctcccttgaaa 924



to top

>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 203279

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    gtgtatgtgtgtgtagtttgt 46
             |||||||||||||||||||||
Sbjct: 81133 gtgtatgtgtgtgtagtttgt 81153



to top

>emb|AL078597.11|HSDJ442I1 Human DNA sequence from clone RP3-442I1 on chromosome 6q12-13 Contains
             the 5' end of a novel gene, complete sequence
          Length = 138209

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    aaaggagaaataagtctctaa 77
             |||||||||||||||||||||
Sbjct: 98143 aaaggagaaataagtctctaa 98163



to top

>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152883

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    tataaaaggaaaaaggagaaa 66
             |||||||||||||||||||||
Sbjct: 67292 tataaaaggaaaaaggagaaa 67272



to top

>gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 136511

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tataaaaggaaaaaggagaaa 66
              |||||||||||||||||||||
Sbjct: 135352 tataaaaggaaaaaggagaaa 135372



to top

>gb|AC009300.2| Homo sapiens BAC clone RP11-52A21 from 2, complete sequence
          Length = 109939

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    aaaaggaaaaaggagaaataa 69
             |||||||||||||||||||||
Sbjct: 37794 aaaaggaaaaaggagaaataa 37774



to top

>emb|X54399.1|RDU6RNA R.dacryoidum intron from U6 small nuclear RNA gene
          Length = 186

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 349 atgctcccgacctcacaggaa 369
           |||||||||||||||||||||
Sbjct: 117 atgctcccgacctcacaggaa 137



to top

>gb|AC132374.4| Mus musculus BAC clone RP24-69E21 from 10, complete sequence
          Length = 188514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     gtgtatgtgtgtgtagtttgt 46
              |||||||||||||||||||||
Sbjct: 105080 gtgtatgtgtgtgtagtttgt 105060



to top

>emb|AL445229.12| Human DNA sequence from clone RP5-1190M18 on chromosome 1, complete
            sequence
          Length = 32458

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 421  gtagcaattgctcccttgaaa 441
            |||||||||||||||||||||
Sbjct: 3263 gtagcaattgctcccttgaaa 3283



to top

>emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on chromosome 11, complete
              sequence
          Length = 142565

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     aaaaggagaaataagtctcta 76
              |||||||||||||||||||||
Sbjct: 139298 aaaaggagaaataagtctcta 139318



to top

>gb|AC101722.14| Mus musculus chromosome 5, clone RP23-310L24, complete sequence
          Length = 172370

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tgccgaaaaccgggacggga 392
              ||||||||||||||||||||
Sbjct: 108000 tgccgaaaaccgggacggga 108019



to top

>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete
             sequence
          Length = 197843

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tgtatgtgtgtgtagtttgt 46
             ||||||||||||||||||||
Sbjct: 69357 tgtatgtgtgtgtagtttgt 69376



to top

>ref|NG_002392.2| Homo sapiens major histocompatibility complex, class II, DR52 haplotype
             (DR52) on chromosome 6
          Length = 139182

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 89906 ataaaaggaaaaaggagaaa 89887



to top

>ref|NG_002432.1| Homo sapiens major histocompatibility complex, class II, DR51 haplotype
             (DR51) on chromosome 6
          Length = 137374

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 89568 ataaaaggaaaaaggagaaa 89549



to top

>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence
          Length = 177269

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    aaggaaaacaaaactgagat 108
             ||||||||||||||||||||
Sbjct: 71229 aaggaaaacaaaactgagat 71210



to top

>gb|AF125313.2| Mus musculus chromosome X clones CT7-508o14, CT7-549H18, CT7-552o8,
             proximal part, complete sequence
          Length = 107641

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   tggctttcacaatctcatca 470
             ||||||||||||||||||||
Sbjct: 83243 tggctttcacaatctcatca 83262



to top

>ref|NM_001001182.2| Mus musculus bromodomain adjacent to zinc finger domain, 2B (Baz2b),
            mRNA
          Length = 8012

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   ttgtataaaaggaaaaaggagaaa 66
            |||| |||||||||||||||||||
Sbjct: 6733 ttgtttaaaaggaaaaaggagaaa 6710



to top

>gb|AC135509.2| Mus musculus BAC clone RP24-448I12 from chromosome 17, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    gtgtatgtgtgtgtagtttgtata 49
             ||||||||||||||||| ||||||
Sbjct: 34020 gtgtatgtgtgtgtagtgtgtata 34043



to top

>ref|XM_654351.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1839.2), mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 tgggaaatggccattgggaa 571
           ||||||||||||||||||||
Sbjct: 373 tgggaaatggccattgggaa 392



to top

>gb|AC117702.10| Mus musculus chromosome 10, clone RP23-464I2, complete sequence
          Length = 147559

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     gtgtatgtgtgtgtagtttgtata 49
              |||| |||||||||||||||||||
Sbjct: 126316 gtgtgtgtgtgtgtagtttgtata 126293



to top

>gb|AC115805.12| Mus musculus chromosome 10, clone RP23-412P24, complete sequence
          Length = 193434

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    gtgtatgtgtgtgtagtttgtata 49
             |||| |||||||||||||||||||
Sbjct: 21266 gtgtgtgtgtgtgtagtttgtata 21243



to top

>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence
          Length = 167597

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    aaggaaaacaaaactgagat 108
             ||||||||||||||||||||
Sbjct: 27398 aaggaaaacaaaactgagat 27417



to top

>gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome 13, complete sequence
          Length = 192969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     agaaggaaaacaaaactgagatca 110
              ||||| ||||||||||||||||||
Sbjct: 178615 agaagcaaaacaaaactgagatca 178592



to top

>gb|AC117210.3| Mus musculus BAC clone RP23-286E20 from 10, complete sequence
          Length = 178173

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     gtgtatgtgtgtgtagtttgtata 49
              |||| |||||||||||||||||||
Sbjct: 140338 gtgtctgtgtgtgtagtttgtata 140315



to top

>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence
          Length = 230940

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     agaaggaaaacaaaactgagatca 110
              ||||| ||||||||||||||||||
Sbjct: 222204 agaagcaaaacaaaactgagatca 222227



to top

>ref|XM_645641.1| Entamoeba histolytica HM-1:IMSS V-type ATPase, D subunit, putative
           (202.t00016) partial mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 tttcacaatctcatcaagaa 474
           ||||||||||||||||||||
Sbjct: 323 tttcacaatctcatcaagaa 342



to top

>ref|XM_646506.1| Entamoeba histolytica HM-1:IMSS V-type ATPase, D subunit, putative
           (156.t00014) partial mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 tttcacaatctcatcaagaa 474
           ||||||||||||||||||||
Sbjct: 323 tttcacaatctcatcaagaa 342



to top

>gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, complete sequence
          Length = 226307

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tctaatttcctgtcagaagg 92
              ||||||||||||||||||||
Sbjct: 189839 tctaatttcctgtcagaagg 189820



to top

>gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 245907

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     tatgtgtgtgtagtttgtataaaa 52
              |||||||||||||||||| |||||
Sbjct: 150814 tatgtgtgtgtagtttgtttaaaa 150837



to top

>emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on chromosome 6p21.1-21.3
            Contains the HLA-DRB3, HLA-DRB9 and HLA-DRA genes for
            major histocompatibility complex class II DR beta
            3*01012, beta 9 (pseudogene) and alpha and the 5' end of
            the BTNL2 gene encoding MHC class II associated
            butyrophilin-like 2. Contains a CpG island, ESTs, STSs
            and GSSs, complete sequence
          Length = 131234

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   ataaaaggaaaaaggagaaa 66
            ||||||||||||||||||||
Sbjct: 9559 ataaaaggaaaaaggagaaa 9578



to top

>emb|BX120007.9| Human DNA sequence from clone DASS-397D15 on chromosome 6, complete
             sequence
          Length = 109682

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 91321 ataaaaggaaaaaggagaaa 91302



to top

>emb|AL929581.5| Human DNA sequence from clone DAQB-97F8 on chromosome 6 Contains the 5'
             end of the HLA-DRB9 pseudogene for major
             histocompatibility complex, class II, DR beta 9, the
             HLA-DRB3 gene for major histocompatibility complex, class
             II DR beta 3, the HLA-DRB2 pseudogene for major
             histocompatibility complex, class II, DR beta 2, the
             HLA-DRB1 gene for major histocompatibility complex, class
             II, DR beta 1and one CpG island, complete sequence
          Length = 118771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 52423 ataaaaggaaaaaggagaaa 52404



to top

>emb|AL713966.7| Human DNA sequence from clone XXbac-161M6 on chromosome 6 contains the
             HLA-DRB5 gene for major histocompatibility complex, class
             II, DR beta 5, the HLA-DRB6 pseudogene for major
             histocompatibility complex, class II, DR beta 6, the
             HLA-DRB1 gene for major histocompatibility complex, class
             II, DR beta 1 and one CpG island, complete sequence
          Length = 124047

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 76241 ataaaaggaaaaaggagaaa 76222



to top

>emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on chromosome 6 contains the
             HLA-DRB3 gene for major histocompatibility complex, class
             II, DR beta 3, a major histocompatibility complex, class
             II, DR beta pseudogene, the HLA-DRB1 gene for major
             histocompatibility complex, class II, DR beta 1 and one
             CpG island, complete sequence
          Length = 130819

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 41757 ataaaaggaaaaaggagaaa 41738



to top

>emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chromosome 13 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH)
             pseudogene, 2 novel genes, a H2B histone family, member H
             (H2BFH)(H2B.h, H2B/h, dJ221C16.8) pseudogene, the 3' end
             of the EFHA1 gene for EF hand domain family, member A1 and
             three CpG islands, complete sequence
          Length = 167830

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    taaaaggaaaaaggagaaat 67
             ||||||||||||||||||||
Sbjct: 20729 taaaaggaaaaaggagaaat 20748



to top

>emb|AL080239.12|HSG256O22 Human DNA sequence from clone GS1-256O22 on chromosome Xq26.3-28 Contains
              a novel pseudogene, the DKFZp547M2010 gene, a heterogeneous
              nuclear ribonucleoprotein H pseudogene, a novel gene and a
              CpG island, complete sequence
          Length = 216215

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     agtctctaatttcctgtcag 88
              ||||||||||||||||||||
Sbjct: 121883 agtctctaatttcctgtcag 121902



to top

>emb|X15378.1|MMPO Mouse gene for the light and heavy chains of myeloperoxidase
          Length = 11913

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 26   gtgtatgtgtgtgtagtttgtata 49
            ||||||||||||||||| ||||||
Sbjct: 6476 gtgtatgtgtgtgtagtatgtata 6499



to top

>gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 202181

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaaaggaaaaaggagaaata 68
              ||||||||||||||||||||
Sbjct: 201203 aaaaggaaaaaggagaaata 201222



to top

>gb|AC008021.10| Homo sapiens chromosome 18, clone RP11-504H5, complete sequence
          Length = 169439

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   gtgattgtaggaagcaatgc 352
             ||||||||||||||||||||
Sbjct: 12245 gtgattgtaggaagcaatgc 12264



to top

>emb|BX927235.7| Human DNA sequence from clone DAMA-25D9 on chromosome 6, complete
             sequence
          Length = 99242

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 41719 ataaaaggaaaaaggagaaa 41700



to top

>emb|AL929409.5| Mouse DNA sequence from clone RP23-402H11 on chromosome 4 Contains the 3'
              end of the Cdk5rap2 gene for CDK5 regulatory subunit
              associated protein 2 and the gene for a novel protein
              identical to tyrosine 3-monooxygenase/tryptophan
              5-monooxygenase activation protein theta Ywhaq, complete
              sequence
          Length = 147628

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     aaaggaaaaaggagaaataa 69
              ||||||||||||||||||||
Sbjct: 136437 aaaggaaaaaggagaaataa 136456



to top

>emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 in linkage group 13,
              complete sequence
          Length = 134841

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     gtgtatgtgtgtgtagtttgtata 49
              |||| |||||||||||||||||||
Sbjct: 125321 gtgtgtgtgtgtgtagtttgtata 125298



to top

>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete
             sequence
          Length = 172605

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    tcctgtcagaaggaaaacaaaact 103
             ||||| ||||||||||||||||||
Sbjct: 61433 tcctgacagaaggaaaacaaaact 61456



to top

>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8,
             complete sequence
          Length = 218866

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ctgtcagaaggaaaacaaaa 101
             ||||||||||||||||||||
Sbjct: 68317 ctgtcagaaggaaaacaaaa 68298



to top

>gb|AC090398.12| Homo sapiens chromosome 18, clone RP11-669I1, complete sequence
          Length = 133378

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   gtgattgtaggaagcaatgc 352
             ||||||||||||||||||||
Sbjct: 49883 gtgattgtaggaagcaatgc 49902



to top

>gb|AY282416.1| Homo sapiens Toll-interleukin 1 receptor (TIR) domain-containing
            adapter protein (TIRAP) gene, complete cds
          Length = 20684

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   tttgtataaaaggaaaaagg 61
            ||||||||||||||||||||
Sbjct: 3100 tttgtataaaaggaaaaagg 3119



to top

>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 216954

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaaaggaaaaaggagaaata 68
             ||||||||||||||||||||
Sbjct: 95218 aaaaggaaaaaggagaaata 95237



to top

>gb|AC134333.3| Mus musculus BAC clone RP24-140M19 from chromosome 10, complete
            sequence
          Length = 137079

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   gtgtatgtgtgtgtagtttgtata 49
            |||| |||||||||||||||||||
Sbjct: 7963 gtgtctgtgtgtgtagtttgtata 7940



to top

>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete
             sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    tatgtgtgtgtagtttgtat 48
             ||||||||||||||||||||
Sbjct: 42058 tatgtgtgtgtagtttgtat 42039



to top

>dbj|AK051966.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230026C07 product:hypothetical protein,
            full insert sequence
          Length = 2756

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   gtgtatgtgtgtgtagtttgtata 49
            ||||||||||||||||| ||||||
Sbjct: 1714 gtgtatgtgtgtgtagtgtgtata 1691



to top

>gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 182146

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaaaggaaaaaggagaaata 68
             ||||||||||||||||||||
Sbjct: 58467 aaaaggaaaaaggagaaata 58486



to top

>emb|BX511165.4| Zebrafish DNA sequence from clone DKEY-22L14 in linkage group 7, complete
              sequence
          Length = 134966

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 30     atgtgtgtgtagtttgtataaaaggaaaaagg 61
              |||||||||| |||||||||||| ||||||||
Sbjct: 114094 atgtgtgtgt-gtttgtataaaaagaaaaagg 114124



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 503      agagagtagaaaagagagag 522
                ||||||||||||||||||||
Sbjct: 15601465 agagagtagaaaagagagag 15601446



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 192      gagatgcttggtagcacagg 211
                ||||||||||||||||||||
Sbjct: 12772513 gagatgcttggtagcacagg 12772532



to top

>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
             complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   agagagtagaaaagagagag 522
             ||||||||||||||||||||
Sbjct: 88831 agagagtagaaaagagagag 88812



to top

>gb|AC080018.14|AC080018 Mus musculus 3 BAC RP23-200E11 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 209643

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     gtgtatgtgtgtgtagtttg 45
              ||||||||||||||||||||
Sbjct: 111131 gtgtatgtgtgtgtagtttg 111112



to top

>gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosome 10, complete
             sequence
          Length = 201867

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 502   cagagagtagaaaagagagagcag 525
             ||||||| ||||||||||||||||
Sbjct: 81564 cagagagaagaaaagagagagcag 81541



to top

>gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complete sequence
          Length = 43657

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 26    gtgtatgtgtgtgtagtttgtataaaag 53
             |||||||||||||| |||||||||||||
Sbjct: 29111 gtgtatgtgtgtgt-gtttgtataaaag 29137



to top

>gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, complete sequence
          Length = 180964

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   aaatggccattgggaatgca 575
             ||||||||||||||||||||
Sbjct: 80381 aaatggccattgggaatgca 80362



to top

>emb|BX296551.4| Zebrafish DNA sequence from clone CH211-224L10 in linkage group 23,
             complete sequence
          Length = 180447

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tgtttgatttgccgtcccag 276
             ||||||||||||||||||||
Sbjct: 20232 tgtttgatttgccgtcccag 20251



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tgtttgatttgccgtcccag 276
             ||||||||||||||||||||
Sbjct: 17596 tgtttgatttgccgtcccag 17615



to top

>gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, complete cds
          Length = 92047

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 26   gtgtatgtgtgtgtagtttgtata 49
            ||||||||||||||||| ||||||
Sbjct: 5674 gtgtatgtgtgtgtagtgtgtata 5697



to top

>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0027G10
          Length = 184759

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   gagatgcttggtagcacagg 211
             ||||||||||||||||||||
Sbjct: 80290 gagatgcttggtagcacagg 80309



to top

>emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in linkage group 7, complete
              sequence
          Length = 226160

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 30     atgtgtgtgtagtttgtataaaaggaaaaagg 61
              |||||||||| |||||||||||| ||||||||
Sbjct: 104813 atgtgtgtgt-gtttgtataaaaagaaaaagg 104783



to top

>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete
             sequence
          Length = 217352

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    ttgtataaaaggaaaaaggagaaa 66
             |||| |||||||||||||||||||
Sbjct: 54061 ttgtttaaaaggaaaaaggagaaa 54084



to top

>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome
          Length = 791654

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    aaaagatgaagcaatttgta 423
              ||||||||||||||||||||
Sbjct: 208221 aaaagatgaagcaatttgta 208240



to top

>gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 183070

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaaaggaaaaaggagaaata 68
             ||||||||||||||||||||
Sbjct: 47715 aaaaggaaaaaggagaaata 47734



to top

>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence
          Length = 117378

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     atgtgtgtgtagtttgtata 49
              ||||||||||||||||||||
Sbjct: 109086 atgtgtgtgtagtttgtata 109067



to top

>gb|AF068872.1|AF068872 Glycine curvata glutamine synthetase gene, paralog 1, nuclear gene
           encoding chloroplast protein, partial cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  aaggaaaaaggagaaataag 70
           ||||||||||||||||||||
Sbjct: 641 aaggaaaaaggagaaataag 622



to top

>gb|AC106797.2| Homo sapiens chromosome 5 clone RP11-433I2, complete sequence
          Length = 169265

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   atcctgtcttcctctgtgat 337
             ||||||||||||||||||||
Sbjct: 83576 atcctgtcttcctctgtgat 83557



to top

>dbj|AP001318.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712L6, complete
             sequence
          Length = 159565

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tttgtataaaaggaaaaagg 61
             ||||||||||||||||||||
Sbjct: 54974 tttgtataaaaggaaaaagg 54993



to top

>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete
              sequence
          Length = 144077

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    tctcatcaagaatgaactcc 482
              ||||||||||||||||||||
Sbjct: 125865 tctcatcaagaatgaactcc 125846



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 503      agagagtagaaaagagagag 522
                ||||||||||||||||||||
Sbjct: 15609706 agagagtagaaaagagagag 15609687



to top

>emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chromosome 4, complete
             sequence
          Length = 232950

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 492   tcacccctgtcagagagtagaaaa 515
             ||||| ||||||||||||||||||
Sbjct: 51371 tcacctctgtcagagagtagaaaa 51348



to top

>emb|AL833626.1|HSM804939 Homo sapiens mRNA; cDNA DKFZp686M1273 (from clone DKFZp686M1273)
          Length = 3365

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   taaaaggaaaaaggagaaat 67
            ||||||||||||||||||||
Sbjct: 1290 taaaaggaaaaaggagaaat 1271



to top

>dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-215C1, complete
              sequences
          Length = 150724

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     tatgtgtgtgtagtttgtat 48
              ||||||||||||||||||||
Sbjct: 148793 tatgtgtgtgtagtttgtat 148812



to top

>emb|CR788250.6| Human DNA sequence from clone DAMC-146E17 on chromosome 6, complete
             sequence
          Length = 88203

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataaaaggaaaaaggagaaa 66
             ||||||||||||||||||||
Sbjct: 62755 ataaaaggaaaaaggagaaa 62736



to top

>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete
             sequences
          Length = 172173

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tatgtgtgtgtagtttgtat 48
             ||||||||||||||||||||
Sbjct: 30564 tatgtgtgtgtagtttgtat 30583



to top

>gb|BC042646.1| Mus musculus bromodomain adjacent to zinc finger domain, 2B, mRNA
           (cDNA clone IMAGE:5357055), complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 43  ttgtataaaaggaaaaaggagaaa 66
           |||| |||||||||||||||||||
Sbjct: 586 ttgtttaaaaggaaaaaggagaaa 563



to top

>gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complete sequence
          Length = 218313

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 502    cagagagtagaaaagagagagcag 525
              ||||||| ||||||||||||||||
Sbjct: 196219 cagagagaagaaaagagagagcag 196196



to top

>gb|BC053917.1| Mus musculus bromodomain adjacent to zinc finger domain, 2B, mRNA
            (cDNA clone IMAGE:6306095), containing frame-shift errors
          Length = 3668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   ttgtataaaaggaaaaaggagaaa 66
            |||| |||||||||||||||||||
Sbjct: 2389 ttgtttaaaaggaaaaaggagaaa 2366



to top

>gb|AC170262.2| Mus musculus BAC clone RP23-163J7 from chromosome 17, complete sequence
          Length = 219714

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     gtgtatgtgtgtgtagtttgtata 49
              ||||||||||||||||| ||||||
Sbjct: 150712 gtgtatgtgtgtgtagtgtgtata 150735



to top

>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete
              sequence
          Length = 213391

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     gtgtatgtgtgtgtagtttgtata 49
              ||||||||||||||||| ||||||
Sbjct: 112248 gtgtatgtgtgtgtagtgtgtata 112225



to top

>emb|AL606745.11| Mouse DNA sequence from clone RP23-32L6 on chromosome 3, complete
             sequence
          Length = 192332

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gagatcacttcacaaaaatg 123
             ||||||||||||||||||||
Sbjct: 98228 gagatcacttcacaaaaatg 98209



to top

>emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chromosome X, complete
             sequence
          Length = 226657

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   tggctttcacaatctcatca 470
             ||||||||||||||||||||
Sbjct: 68773 tggctttcacaatctcatca 68792



to top

>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region
              DXS709-SRPX, complete sequence
          Length = 337101

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     aaggaaaaaggagaaataag 70
              ||||||||||||||||||||
Sbjct: 330835 aaggaaaaaggagaaataag 330816



to top

>emb|AL606832.4| Mouse DNA sequence from clone RP23-346G22 on chromosome 3, complete
             sequence
          Length = 157428

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gtgtatgtgtgtgtagtttg 45
             ||||||||||||||||||||
Sbjct: 83766 gtgtatgtgtgtgtagtttg 83785


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,746,429
Number of Sequences: 3902068
Number of extensions: 6746429
Number of successful extensions: 304211
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 303598
Number of HSP's gapped (non-prelim): 606
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top