| Clone Name | rbaal20g05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ495771.1|HVU495771 Hordeum vulgare partial mRNA for putative thioredoxin reductase Length = 642 Score = 1033 bits (521), Expect = 0.0 Identities = 531/539 (98%) Strand = Plus / Minus Query: 97 tggcaggggtcaacaagatgttatattgtacaacaaagaatatattttggattcaataag 156 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 622 tggcaggggtcaacaagatgttatwttgtacaacaaagratatattttggattcaataag 563 Query: 157 ggcgatcggttaatttcctatggcatgactgcaccaggctcatctgagaatttgaccaaa 216 |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 562 ggcgrtcggttaatttcctatggcatgactgcaccaggstcatctgrgaatttgaccaaa 503 Query: 217 aattgcccaccagcgtggcttctaaatatagtcaatatatgtgtaaatggaggccattac 276 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 502 aattgcccaccascgtggcttctaaatataghcaatatatgtgtaaatggaggccattac 443 Query: 277 acttcaaaaccctgggacaaacaatgagctcagatcatttgttcgactcaatgaattccc 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 acttcaaaaccctgggacaaacaatgagctcagatcatttgttcgactcaatgaattccc 383 Query: 337 ggtattccttcttcatcttcacaccagagaaagtcctgatcatttctttgtttttaaaga 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 ggtattccttcttcatcttcacaccagagaaagtcctgatcatttctttgtttttaaaga 323 Query: 397 actgaacacaaggtgttcccatgatgcctgcagcttctgctatttcagggtcctcttcaa 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 actgaacacaaggtgttcccatgatgcctgcagcttctgctatttcagggtcctcttcaa 263 Query: 457 tgtcaatttcaacaaaatgaacgtattcgtcatactcatctataaccttgttcaaaattg 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 tgtcaatttcaacaaaatgaacgtattcgtcatactcatctataaccttgttcaaaattg 203 Query: 517 gttttaatgttctgcagggaccacatgttggagaagtatatagaaccaaaatgagccttg 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 gttttaatgttctgcagggaccacatgttggagaagtatatagaaccaaaatgagccttg 143 Query: 577 ggcttccatggtataacttgcggagtgcatactgtcccttgtgctttgggtgagtaatg 635 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142 ggcttccatggtataacttgcggagtgcatactgtcccttgtgctttgtgtgagtaatg 84
>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin reductase (NtrC gene) Length = 1684 Score = 321 bits (162), Expect = 2e-84 Identities = 288/330 (87%) Strand = Plus / Minus Query: 306 tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccagag 365 |||| ||||||||| ||||| || || |||| |||||||||||||| || ||||||||| Sbjct: 1528 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 1469 Query: 366 aaagtcctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcct 425 | |||||||| ||||||||| |||||||| || |||||||| |||||||||||||||||| Sbjct: 1468 acagtcctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcct 1409 Query: 426 gcagcttctgctatttcagggtcctcttcaatgtcaatttcaacaaaatgaacgtattcg 485 |||||||||||||||||||| ||||| || ||||||||||| ||||||||||||| |||| Sbjct: 1408 gcagcttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcg 1349 Query: 486 tcatactcatctataaccttgttcaaaattggttttaatgttctgcagggaccacatgtt 545 | |||||||||||||||||| | | |||||| ||||| |||||||| |||||||||||| Sbjct: 1348 ttgtactcatctataaccttgcttagaattggctttaaggttctgcaaggaccacatgtt 1289 Query: 546 ggagaagtatatagaaccaaaatgagccttgggcttccatggtataacttgcggagtgca 605 ||||||||||||||||| | | |||||||| ||| |||| |||| |||||||||||| Sbjct: 1288 ggagaagtatatagaacacagacaagccttggactttcatgatatactttgcggagtgca 1229 Query: 606 tactgtcccttgtgctttgggtgagtaatg 635 ||||||||| | ||||||| ||||| |||| Sbjct: 1228 tactgtcccctatgctttgtgtgagaaatg 1199
>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence Length = 1847 Score = 321 bits (162), Expect = 2e-84 Identities = 288/330 (87%) Strand = Plus / Minus Query: 306 tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccagag 365 |||| ||||||||| ||||| || || |||| |||||||||||||| || ||||||||| Sbjct: 1578 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 1519 Query: 366 aaagtcctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcct 425 | |||||||| ||||||||| |||||||| || |||||||| |||||||||||||||||| Sbjct: 1518 acagtcctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcct 1459 Query: 426 gcagcttctgctatttcagggtcctcttcaatgtcaatttcaacaaaatgaacgtattcg 485 |||||||||||||||||||| ||||| || ||||||||||| ||||||||||||| |||| Sbjct: 1458 gcagcttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcg 1399 Query: 486 tcatactcatctataaccttgttcaaaattggttttaatgttctgcagggaccacatgtt 545 | |||||||||||||||||| | | |||||| ||||| |||||||| |||||||||||| Sbjct: 1398 ttgtactcatctataaccttgcttagaattggctttaaggttctgcaaggaccacatgtt 1339 Query: 546 ggagaagtatatagaaccaaaatgagccttgggcttccatggtataacttgcggagtgca 605 ||||||||||||||||| | | |||||||| ||| |||| |||| |||||||||||| Sbjct: 1338 ggagaagtatatagaacacagacaagccttggactttcatgatatactttgcggagtgca 1279 Query: 606 tactgtcccttgtgctttgggtgagtaatg 635 ||||||||| | ||||||| ||||| |||| Sbjct: 1278 tactgtcccctatgctttgtgtgagaaatg 1249 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 tttgaccaaaaattgcccaccagcgtggc 235 ||||||||||||||| |||||| |||||| Sbjct: 1674 tttgaccaaaaattggccaccaccgtggc 1646
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 371 cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 430 ||||| ||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 27645126 cctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcctgcagc 27645067 Query: 431 ttctgctatttcagggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcata 490 ||||||||||||||| ||||| || ||||||||||| ||||||||||||| ||||| || Sbjct: 27645066 ttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcgttgta 27645007 Query: 491 ctcatctataacct 504 |||||||||||||| Sbjct: 27645006 ctcatctataacct 27644993 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 512 aattggttttaatgttctgcagggaccacatgttggagaagtatatagaaccaaaatgag 571 |||||| ||||| |||||||| ||||||||||||||||||||||||||||| | | || Sbjct: 27644543 aattggctttaaggttctgcaaggaccacatgttggagaagtatatagaacacagacaag 27644484 Query: 572 ccttgggcttccatggtataacttgcggagtgcatactg 610 |||||| ||| |||| |||| ||||||||||||||||| Sbjct: 27644483 ccttggactttcatgatatactttgcggagtgcatactg 27644445 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 306 tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccagag 365 |||| ||||||||| ||||| || || |||| |||||||||||||| || ||||||||| Sbjct: 27645314 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 27645255 Query: 366 aaagtcctg 374 | ||||||| Sbjct: 27645254 acagtcctg 27645246
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 371 cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 430 ||||| ||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 102119 cctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcctgcagc 102060 Query: 431 ttctgctatttcagggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcata 490 ||||||||||||||| ||||| || ||||||||||| ||||||||||||| ||||| || Sbjct: 102059 ttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcgttgta 102000 Query: 491 ctcatctataacct 504 |||||||||||||| Sbjct: 101999 ctcatctataacct 101986 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 512 aattggttttaatgttctgcagggaccacatgttggagaagtatatagaaccaaaatgag 571 |||||| ||||| |||||||| ||||||||||||||||||||||||||||| | | || Sbjct: 101536 aattggctttaaggttctgcaaggaccacatgttggagaagtatatagaacacagacaag 101477 Query: 572 ccttgggcttccatggtataacttgcggagtgcatactg 610 |||||| ||| |||| |||| ||||||||||||||||| Sbjct: 101476 ccttggactttcatgatatactttgcggagtgcatactg 101438 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 306 tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccagag 365 |||| ||||||||| ||||| || || |||| |||||||||||||| || ||||||||| Sbjct: 102307 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 102248 Query: 366 aaagtcctg 374 | ||||||| Sbjct: 102247 acagtcctg 102239
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 371 cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 430 ||||| ||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 24228 cctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcctgcagc 24169 Query: 431 ttctgctatttcagggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcata 490 ||||||||||||||| ||||| || ||||||||||| ||||||||||||| ||||| || Sbjct: 24168 ttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcgttgta 24109 Query: 491 ctcatctataacct 504 |||||||||||||| Sbjct: 24108 ctcatctataacct 24095 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 512 aattggttttaatgttctgcagggaccacatgttggagaagtatatagaaccaaaatgag 571 |||||| ||||| |||||||| ||||||||||||||||||||||||||||| | | || Sbjct: 23645 aattggctttaaggttctgcaaggaccacatgttggagaagtatatagaacacagacaag 23586 Query: 572 ccttgggcttccatggtataacttgcggagtgcatactg 610 |||||| ||| |||| |||| ||||||||||||||||| Sbjct: 23585 ccttggactttcatgatatactttgcggagtgcatactg 23547 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 306 tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccagag 365 |||| ||||||||| ||||| || || |||| |||||||||||||| || ||||||||| Sbjct: 24416 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 24357 Query: 366 aaagtcctg 374 | ||||||| Sbjct: 24356 acagtcctg 24348
>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron transporter/ oxidoreductase/ thioredoxin-disulfide reductase AT2G41680 mRNA, complete cds Length = 1800 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 1594 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1535 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 1534 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 1475 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 1474 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 1415 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 1414 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 1355 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 1354 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 1295 Query: 623 tg 624 || Sbjct: 1294 tg 1293
>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680/T32G6.20) mRNA, complete cds Length = 1590 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 1578 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1519 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 1518 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 1459 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 1458 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 1399 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 1398 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 1339 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 1338 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 1279 Query: 623 tg 624 || Sbjct: 1278 tg 1277
>gb|AY093250.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680) mRNA, complete cds Length = 803 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 684 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 625 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 624 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 565 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 564 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 505 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 504 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 445 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 444 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 385 Query: 623 tg 624 || Sbjct: 384 tg 383
>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680; T32G6.20) mRNA, complete cds Length = 1802 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 1611 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1552 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 1551 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 1492 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 1491 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 1432 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 1431 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 1372 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 1371 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 1312 Query: 623 tg 624 || Sbjct: 1311 tg 1310
>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds Length = 1783 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 1591 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1532 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 1531 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 1472 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 1471 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 1412 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 1411 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 1352 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 1351 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 1292 Query: 623 tg 624 || Sbjct: 1291 tg 1290
>emb|BX821094.1|CNS0A9Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL14ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 644 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 465 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 406 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 405 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 346 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 345 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 286 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 285 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 226 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 225 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 166 Query: 623 tg 624 || Sbjct: 165 tg 164
>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1726 Score = 131 bits (66), Expect = 3e-27 Identities = 243/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 1584 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1525 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 1524 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 1465 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 1464 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 1405 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| || Sbjct: 1404 cttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagtac 1345 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 1344 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 1285 Query: 623 tg 624 || Sbjct: 1284 tg 1283
>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 123 bits (62), Expect = 7e-25 Identities = 242/302 (80%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcatttc 382 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| |||||| Sbjct: 1221 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1162 Query: 383 tttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctatttc 442 ||||| || |||||||| ||||| || |||||||| || || || ||||| || ||||| Sbjct: 1161 cttgttcttgaagaactgcacacatggggttcccataattccagctgcttcagcaatttc 1102 Query: 443 agggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataac 502 | || || || |||||||| ||||||||||| || | | || ||||||||| | || Sbjct: 1101 ttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgaccac 1042 Query: 503 cttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaac 562 |||||||||||| || || | || | ||||| ||||||||||| ||||| ||||| || Sbjct: 1041 cttgttcaaaataggcttcagagtcgtacaggggccacatgttggtgaagtgtatagtac 982 Query: 563 caaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgctt 622 ||| || | ||||| || ||||||||| || | || |||||||||||||||||||| Sbjct: 981 caatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgctt 922 Query: 623 tg 624 || Sbjct: 921 tg 920
>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1730 Score = 101 bits (51), Expect = 3e-18 Identities = 241/303 (79%), Gaps = 1/303 (0%) Strand = Plus / Minus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacaccagagaaagtcctgatcattt- 381 |||||||||||| ||||| || ||||||||||||||||| || | |||||||| ||||| Sbjct: 1595 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1536 Query: 382 ctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagcttctgctattt 441 |||| | || |||||||| ||||| || |||||||| || || || ||||| || |||| Sbjct: 1535 ctttttcttgtaagaactgcacacatggggttcccataattccagctgcttcagcaattt 1476 Query: 442 cagggtcctcttcaatgtcaatttcaacaaaatgaacgtattcgtcatactcatctataa 501 | | || || || |||||||| ||||||||||| || | | || ||||||||| | | Sbjct: 1475 cttgatcttcctcgatgtcaatctcaacaaaatgcacatcatggttatactcatcgacca 1416 Query: 502 ccttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatatagaa 561 |||||||||| || || || | || || ||||| ||||||||||| ||||| ||||| | Sbjct: 1415 ccttgttcaagataggcttcagagtcctacaggggccacatgttggtgaagtgtatagta 1356 Query: 562 ccaaaatgagccttgggcttccatggtataacttgcggagtgcatactgtcccttgtgct 621 |||| || | ||||| || ||||||||| || | || ||||||||||||||||||| Sbjct: 1355 ccaatataactcttggactctcatggtatagttttctaagagcatactgtcccttgtgct 1296 Query: 622 ttg 624 ||| Sbjct: 1295 ttg 1293
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 323 ctcaatgaattcccggtattccttcttcatcttcacacc 361 |||||||||||| ||||| || ||||||||||||||||| Sbjct: 77252 ctcaatgaattctcggtactctttcttcatcttcacacc 77290 Score = 50.1 bits (25), Expect = 0.009 Identities = 85/105 (80%) Strand = Plus / Plus Query: 371 cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 430 ||||| |||||| ||||| || |||||||| ||||| || |||||||| || || || || Sbjct: 77379 cctgagcatttccttgttcttgaagaactgcacacatggggttcccataattccagctgc 77438 Query: 431 ttctgctatttcagggtcctcttcaatgtcaatttcaacaaaatg 475 ||| || ||||| | || || || |||||||| ||||||||||| Sbjct: 77439 ttcagcaatttcttgatcttcctcgatgtcaatctcaacaaaatg 77483 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 501 accttgttcaaaattggttttaatgttctgcagggaccacatgttggagaagtatataga 560 |||||||||||||| || || | || || ||||| ||||||||||| ||||| ||||| Sbjct: 77605 accttgttcaaaataggcttcagagtcctacaggggccacatgttggtgaagtgtatagt 77664 Query: 561 accaa 565 ||||| Sbjct: 77665 accaa 77669
>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete sequence Length = 208746 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tttctttgtttttaaagaactg 400 |||||||||||||||||||||| Sbjct: 155160 tttctttgtttttaaagaactg 155139
>emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in linkage group 1, complete sequence Length = 194021 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tttctttgtttttaaagaactg 400 |||||||||||||||||||||| Sbjct: 80207 tttctttgtttttaaagaactg 80186
>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence Length = 125133 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 602 tgcatactgtcccttgtgcttt 623 |||||||||||||||||||||| Sbjct: 76458 tgcatactgtcccttgtgcttt 76437
>gb|AC008270.3| Homo sapiens BAC clone RP11-111G16 from 2, complete sequence Length = 167733 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 aatatatgtgtaaatggaggcc 271 |||||||||||||||||||||| Sbjct: 82405 aatatatgtgtaaatggaggcc 82384
>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete sequence Length = 230161 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 aaacaatgagctcagatcattt 316 |||||||||||||||||||||| Sbjct: 157506 aaacaatgagctcagatcattt 157485
>gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosome 7, complete sequence Length = 198504 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 35006 catttctttgtttttaaagaa 34986
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 169343 catttctttgtttttaaagaa 169363
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 tatggcatgactgcaccaggc 195 ||||||||||||||||||||| Sbjct: 2683058 tatggcatgactgcaccaggc 2683038
>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence Length = 178055 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 122727 catttctttgtttttaaagaa 122707
>gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosome 16, complete sequence Length = 147166 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 74806 catttctttgtttttaaagaa 74826
>emb|AL139101.13| Human DNA sequence from clone RP3-414L4 on chromosome 6 Contains the 3' end of the TIAM2 gene for T-cell lymphoma invasion and metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)), the CLDN20 gene for claudin 20, the TFB1M gene for transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor BCGI75 (mtTFB, CGI-75)), the 5' end of a novel gene and two CpG islands, complete sequence Length = 116256 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cattacacttcaaaaccctgg 291 ||||||||||||||||||||| Sbjct: 45642 cattacacttcaaaaccctgg 45662
>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete sequence Length = 218059 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 48963 catttctttgtttttaaagaa 48983
>gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosome 12, complete sequence Length = 212532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 126137 catttctttgtttttaaagaa 126157
>emb|BX511005.6| Zebrafish DNA sequence from clone DKEY-72N1 in linkage group 5, complete sequence Length = 139111 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tatattgtacaacaaagaata 138 ||||||||||||||||||||| Sbjct: 131147 tatattgtacaacaaagaata 131167
>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence Length = 223346 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 tcctgatcatttctttgtttt 390 ||||||||||||||||||||| Sbjct: 135442 tcctgatcatttctttgtttt 135462
>gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, complete sequence Length = 182236 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 tcctgatcatttctttgtttt 390 ||||||||||||||||||||| Sbjct: 688 tcctgatcatttctttgtttt 708
>gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, complete sequence Length = 151635 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 tcctgatcatttctttgtttt 390 ||||||||||||||||||||| Sbjct: 143174 tcctgatcatttctttgtttt 143194
>gb|AC151897.3| Mus musculus BAC clone RP24-257D11 from chromosome 7, complete sequence Length = 222313 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 53521 catttctttgtttttaaagaa 53541
>emb|AL157791.4|CNS01RG8 Human chromosome 14 DNA sequence BAC R-647O20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191960 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tatattgtacaacaaagaata 138 ||||||||||||||||||||| Sbjct: 6017 tatattgtacaacaaagaata 6037
>emb|Z54235.1|CEC09G9 Caenorhabditis elegans Cosmid C09G9, complete sequence Length = 32164 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 caacaaagaatatattttggattca 151 |||||||||| |||||||||||||| Sbjct: 7153 caacaaagaaaatattttggattca 7177
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 atcatttctttgtttttaaag 395 ||||||||||||||||||||| Sbjct: 1919040 atcatttctttgtttttaaag 1919060
>gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, complete sequence Length = 188444 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaagaa 397 ||||||||||||||||||||| Sbjct: 128378 catttctttgtttttaaagaa 128398
>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete sequence Length = 201671 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaac 398 ||||||||||||||||||||| Sbjct: 133191 atttctttgtttttaaagaac 133211
>gb|AC164648.3| Mus musculus BAC clone RP23-434H4 from chromosome 18, complete sequence Length = 198430 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 agaaccaaaatgagccttgg 577 |||||||||||||||||||| Sbjct: 110066 agaaccaaaatgagccttgg 110085
>gb|AC120180.19| Mus musculus chromosome 1, clone RP24-499I2, complete sequence Length = 183516 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 atattgtacaacaaagaata 138 |||||||||||||||||||| Sbjct: 43722 atattgtacaacaaagaata 43703
>gb|AC163358.3| Mus musculus BAC clone RP23-11M14 from chromosome 14, complete sequence Length = 208634 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aatatatgtgtaaatggagg 269 |||||||||||||||||||| Sbjct: 283 aatatatgtgtaaatggagg 302
>gb|AC102152.12| Mus musculus chromosome 7, clone RP23-314H9, complete sequence Length = 206923 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tatattttggattcaataag 156 |||||||||||||||||||| Sbjct: 107593 tatattttggattcaataag 107612
>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence Length = 202071 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 61722 atttctttgtttttaaagaa 61741
>gb|AC148991.2| Mus musculus BAC clone RP23-52N2 from chromosome 19, complete sequence Length = 221043 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 166947 atttctttgtttttaaagaa 166966
>gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, complete sequence Length = 268129 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 tgtacaacaaagaatatatt 142 |||||||||||||||||||| Sbjct: 28850 tgtacaacaaagaatatatt 28869
>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete sequence Length = 200350 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aatatatgtgtaaatggagg 269 |||||||||||||||||||| Sbjct: 184281 aatatatgtgtaaatggagg 184300
>gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242055 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 132808 atttctttgtttttaaagaa 132827
>gb|AC114411.24| Mus musculus chromosome 5, clone RP23-162F3, complete sequence Length = 208432 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 aaatatagtcaatatatgtgtaaa 263 ||||||||||||||||||| |||| Sbjct: 37983 aaatatagtcaatatatgtttaaa 37960
>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete sequence Length = 217490 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 53804 atttctttgtttttaaagaa 53823
>gb|AC124688.3| Mus musculus BAC clone RP24-484D9 from chromosome 14, complete sequence Length = 141678 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aatatatgtgtaaatggagg 269 |||||||||||||||||||| Sbjct: 5796 aatatatgtgtaaatggagg 5815
>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16, complete sequence Length = 152450 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 cttgttcaaaattggtttta 522 |||||||||||||||||||| Sbjct: 72407 cttgttcaaaattggtttta 72426
>gb|AC108943.4| Mus musculus BAC clone RP23-66D23 from chromosome 18, complete sequence Length = 191642 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 agaaccaaaatgagccttgg 577 |||||||||||||||||||| Sbjct: 20297 agaaccaaaatgagccttgg 20316
>gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosome 18, complete sequence Length = 194843 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaaga 396 |||||||||||||||||||| Sbjct: 174995 catttctttgtttttaaaga 175014
>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete sequence Length = 186091 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ctttgtttttaaagaactga 401 |||||||||||||||||||| Sbjct: 55211 ctttgtttttaaagaactga 55192
>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence Length = 279112 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 54170 atttctttgtttttaaagaa 54151
>ref|XM_720110.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome ATPase (PY00544) partial mRNA Length = 1911 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tctataaccttgttcaaaat 514 |||||||||||||||||||| Sbjct: 1863 tctataaccttgttcaaaat 1844
>gb|AC011992.3| Homo sapiens BAC clone CTD-2327A23 from 7, complete sequence Length = 80515 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tcatctgagaatttgaccaaaaat 219 ||||||||||||||| |||||||| Sbjct: 33743 tcatctgagaatttggccaaaaat 33720
>ref|XM_736359.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302617.00.0) partial mRNA Length = 309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tctataaccttgttcaaaat 514 |||||||||||||||||||| Sbjct: 261 tctataaccttgttcaaaat 242
>gb|U70857.2| Caenorhabditis elegans cosmid C10G8, complete sequence Length = 30826 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 ttcaatgtcaatttcaacaaaatg 475 ||||||||||||||||| |||||| Sbjct: 24196 ttcaatgtcaatttcaataaaatg 24173
>gb|AC107721.6| Mus musculus chromosome 5, clone RP23-317I8, complete sequence Length = 203227 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 aaatatagtcaatatatgtgtaaa 263 ||||||||||||||||||| |||| Sbjct: 155891 aaatatagtcaatatatgtttaaa 155868
>emb|AL109809.18|HSJ673D20 Human DNA sequence from clone RP4-673D20 on chromosome 20 Contains a PTPNS (protein tyrosine phosphatase, non-receptor type substrate) family pseudogene, the 5' end of the SIRPB2 gene for signal-regulatory protein beta 2 and a CpG island, complete sequence Length = 132396 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tttgtttttaaagaactgaa 402 |||||||||||||||||||| Sbjct: 17164 tttgtttttaaagaactgaa 17145
>emb|CR627485.10| Zebrafish DNA sequence from clone DKEY-203E10 in linkage group 7, complete sequence Length = 180774 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tttctttgtttttaaagaac 398 |||||||||||||||||||| Sbjct: 162287 tttctttgtttttaaagaac 162306
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tcaacaaaatgaacgtattc 484 |||||||||||||||||||| Sbjct: 1380559 tcaacaaaatgaacgtattc 1380540
>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete sequence Length = 204676 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaaga 396 |||||||||||||||||||| Sbjct: 49426 catttctttgtttttaaaga 49445
>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete sequence Length = 176577 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cttcaaaaccctgggacaaa 297 |||||||||||||||||||| Sbjct: 38484 cttcaaaaccctgggacaaa 38465
>gb|AC158199.2| Physcomitrella patens clone JGIASYB-1A14, complete sequence Length = 39093 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 atattttggattcaataagg 157 |||||||||||||||||||| Sbjct: 18443 atattttggattcaataagg 18424
>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence Length = 129203 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tattccttcttcatcttcac 358 |||||||||||||||||||| Sbjct: 101285 tattccttcttcatcttcac 101304
>gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192690 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 cccatgatgcctgcagcttc 433 |||||||||||||||||||| Sbjct: 114259 cccatgatgcctgcagcttc 114278
>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence Length = 187067 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 16181 atttctttgtttttaaagaa 16200
>gb|AC093479.13| Mus musculus chromosome 16, clone RP23-61K2, complete sequence Length = 243771 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 5460 atttctttgtttttaaagaa 5479
>dbj|AK139136.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730042N09 product:unclassifiable, full insert sequence Length = 2903 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 1155 atttctttgtttttaaagaa 1174
>dbj|AK169439.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630001H01 product:Hypothetical cell division control protein 15 homolog [Mus musculus], full insert sequence Length = 2764 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 caacaagatgttatattgta 126 |||||||||||||||||||| Sbjct: 835 caacaagatgttatattgta 854
>gb|AC160059.7| Mus musculus 6 BAC RP23-172L21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212292 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tgttcccatgatgcctgcag 429 |||||||||||||||||||| Sbjct: 104408 tgttcccatgatgcctgcag 104389
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 catttctttgtttttaaaga 396 |||||||||||||||||||| Sbjct: 30123 catttctttgtttttaaaga 30142
>gb|AC152959.2| Mus musculus 6 BAC RP23-78B5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206857 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tgttcccatgatgcctgcag 429 |||||||||||||||||||| Sbjct: 47835 tgttcccatgatgcctgcag 47854
>dbj|AK038447.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230013C15 product:unclassifiable, full insert sequence Length = 3386 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 3059 atttctttgtttttaaagaa 3078
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 taaatatagtcaatatatgt 258 |||||||||||||||||||| Sbjct: 18344169 taaatatagtcaatatatgt 18344150
>gb|U17246.1|YSCL9470 Saccharomyces cerevisiae chromosome XII cosmid 9470 Length = 40738 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 353 cttcacaccagagaaagtcctgatcatttctt 384 |||||||||||||||| |||| ||||||||| Sbjct: 27055 cttcacaccagagaaaatccttttcatttctt 27024
>gb|AC013463.7| Homo sapiens BAC clone RP11-303H9 from 2, complete sequence Length = 168493 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 aaatatagtcaatatatgtg 259 |||||||||||||||||||| Sbjct: 36126 aaatatagtcaatatatgtg 36145
>gb|AC092177.4| Homo sapiens BAC clone RP11-69D8 from 2, complete sequence Length = 100132 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tgatcatttctttgtttttaaaga 396 |||||||||||||||||| ||||| Sbjct: 19630 tgatcatttctttgttttaaaaga 19653
>gb|AC012488.10| Homo sapiens BAC clone RP11-88L20 from 2, complete sequence Length = 104089 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 atatagaaccaaaatgagcc 573 |||||||||||||||||||| Sbjct: 75227 atatagaaccaaaatgagcc 75208
>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1108H10 Length = 136357 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 taaatatagtcaatatatgt 258 |||||||||||||||||||| Sbjct: 101503 taaatatagtcaatatatgt 101484
>emb|AL831780.12| Mouse DNA sequence from clone RP23-394B8 on chromosome 2, complete sequence Length = 173444 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ttcctatggcatgactgcac 190 |||||||||||||||||||| Sbjct: 125973 ttcctatggcatgactgcac 125992
>gb|AC138317.11| Mus musculus chromosome 8, clone RP23-271F20, complete sequence Length = 205957 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 aggtgttcccatgatgcctg 426 |||||||||||||||||||| Sbjct: 171122 aggtgttcccatgatgcctg 171103
>emb|BX649350.9| Zebrafish DNA sequence from clone CH211-161F1 in linkage group 4, complete sequence Length = 115188 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acaacaaagaatatattttg 145 |||||||||||||||||||| Sbjct: 9059 acaacaaagaatatattttg 9040
>gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgatcatttctttgttttta 392 |||||||||||||||||||| Sbjct: 121706 tgatcatttctttgttttta 121725
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tcctcttcaatgtcaatttc 466 |||||||||||||||||||| Sbjct: 381362 tcctcttcaatgtcaatttc 381381
>emb|CT025597.13| Mouse DNA sequence from clone RP23-265N2 on chromosome 13, complete sequence Length = 230327 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tgtacaacaaagaatatatt 142 |||||||||||||||||||| Sbjct: 42592 tgtacaacaaagaatatatt 42573
>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence Length = 197546 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 catttctttgtttttaaaga 396 |||||||||||||||||||| Sbjct: 72509 catttctttgtttttaaaga 72490
>gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome 8, complete sequence Length = 228830 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgagctcagatcatttgttc 320 |||||||||||||||||||| Sbjct: 46257 tgagctcagatcatttgttc 46238
>emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chromosome 4, complete sequence Length = 195937 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttctttgtttttaaagaa 397 |||||||||||||||||||| Sbjct: 29593 atttctttgtttttaaagaa 29612
>gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, complete sequence Length = 206677 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 caacaagatgttatattgta 126 |||||||||||||||||||| Sbjct: 93690 caacaagatgttatattgta 93671 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,308,721 Number of Sequences: 3902068 Number of extensions: 7308721 Number of successful extensions: 162180 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 161718 Number of HSP's gapped (non-prelim): 430 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)