| Clone Name | rbaal20e24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 365 bits (184), Expect = 1e-97 Identities = 349/404 (86%) Strand = Plus / Minus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || || ||||| |||| ||||||||||||| Sbjct: 31178 tgagccagtggcaatcctggaacgcgcacctgcccgaggcttgcagcgtctcgccgacgt 31119 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31118 ctcggggctccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 31059 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||||| ||||| ||||| ||||||| Sbjct: 31058 tgagccgccggatgttggacccgtcgatgtcgacggtgaagatctcgccgtatggctggt 30999 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 30998 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 30939 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtttgtcctgccgccgtccgcgctgtgca 521 || ||||||||||||||||||||| |||||||| |||| ||||| | | ||||||||| Sbjct: 30938 ggctcttggagtccgggctgaaccatgggtggttggtccggccgctgccgccgctgtgca 30879 Query: 522 ccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccgcctc 581 |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | Sbjct: 30878 ccacccgccgcagcccggtgccattggggtgcaccatgtagatggcgaagctgccgctcc 30819 Query: 582 ccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 30818 ccggggcatggcggtcggaggcgaaggcgatccactcgccgtcg 30775
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 365 bits (184), Expect = 1e-97 Identities = 349/404 (86%) Strand = Plus / Minus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || || ||||| |||| ||||||||||||| Sbjct: 35030277 tgagccagtggcaatcctggaacgcgcacctgcccgaggcttgcagcgtctcgccgacgt 35030218 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 35030217 ctcggggctccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 35030158 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||||| ||||| ||||| ||||||| Sbjct: 35030157 tgagccgccggatgttggacccgtcgatgtcgacggtgaagatctcgccgtatggctggt 35030098 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 35030097 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 35030038 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtttgtcctgccgccgtccgcgctgtgca 521 || ||||||||||||||||||||| |||||||| |||| ||||| | | ||||||||| Sbjct: 35030037 ggctcttggagtccgggctgaaccatgggtggttggtccggccgctgccgccgctgtgca 35029978 Query: 522 ccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccgcctc 581 |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | Sbjct: 35029977 ccacccgccgcagcccggtgccattggggtgcaccatgtagatggcgaagctgccgctcc 35029918 Query: 582 ccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 35029917 ccggggcatggcggtcggaggcgaaggcgatccactcgccgtcg 35029874
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 365 bits (184), Expect = 1e-97 Identities = 349/404 (86%) Strand = Plus / Minus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || || ||||| |||| ||||||||||||| Sbjct: 35120349 tgagccagtggcaatcctggaacgcgcacctgcccgaggcttgcagcgtctcgccgacgt 35120290 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 35120289 ctcggggctccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 35120230 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||||| ||||| ||||| ||||||| Sbjct: 35120229 tgagccgccggatgttggacccgtcgatgtcgacggtgaagatctcgccgtatggctggt 35120170 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 35120169 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 35120110 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtttgtcctgccgccgtccgcgctgtgca 521 || ||||||||||||||||||||| |||||||| |||| ||||| | | ||||||||| Sbjct: 35120109 ggctcttggagtccgggctgaaccatgggtggttggtccggccgctgccgccgctgtgca 35120050 Query: 522 ccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccgcctc 581 |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | Sbjct: 35120049 ccacccgccgcagcccggtgccattggggtgcaccatgtagatggcgaagctgccgctcc 35119990 Query: 582 ccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 35119989 ccggggcatggcggtcggaggcgaaggcgatccactcgccgtcg 35119946
>dbj|AK100408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087F22, full insert sequence Length = 2287 Score = 365 bits (184), Expect = 1e-97 Identities = 349/404 (86%) Strand = Plus / Minus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || || ||||| |||| ||||||||||||| Sbjct: 2044 tgagccagtggcaatcctggaacgcgcacctgcccgaggcttgcagcgtctcgccgacgt 1985 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1984 ctcggggctccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 1925 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||||| ||||| ||||| ||||||| Sbjct: 1924 tgagccgccggatgttggacccgtcgatgtcgacggtgaagatctcgccgtatggctggt 1865 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 1864 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 1805 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtttgtcctgccgccgtccgcgctgtgca 521 || ||||||||||||||||||||| |||||||| |||| ||||| | | ||||||||| Sbjct: 1804 ggctcttggagtccgggctgaaccatgggtggttggtccggccgctgccgccgctgtgca 1745 Query: 522 ccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccgcctc 581 |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | Sbjct: 1744 ccacccgccgcagcccggtgccattggggtgcaccatgtagatggcgaagctgccgctcc 1685 Query: 582 ccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1684 ccggggcatggcggtcggaggcgaaggcgatccactcgccgtcg 1641
>dbj|AK067797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D11, full insert sequence Length = 2307 Score = 365 bits (184), Expect = 1e-97 Identities = 349/404 (86%) Strand = Plus / Minus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || || ||||| |||| ||||||||||||| Sbjct: 2071 tgagccagtggcaatcctggaacgcgcacctgcccgaggcttgcagcgtctcgccgacgt 2012 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2011 ctcggggctccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 1952 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||||| ||||| ||||| ||||||| Sbjct: 1951 tgagccgccggatgttggacccgtcgatgtcgacggtgaagatctcgccgtatggctggt 1892 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 1891 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 1832 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtttgtcctgccgccgtccgcgctgtgca 521 || ||||||||||||||||||||| |||||||| |||| ||||| | | ||||||||| Sbjct: 1831 ggctcttggagtccgggctgaaccatgggtggttggtccggccgctgccgccgctgtgca 1772 Query: 522 ccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccgcctc 581 |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | Sbjct: 1771 ccacccgccgcagcccggtgccattggggtgcaccatgtagatggcgaagctgccgctcc 1712 Query: 582 ccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1711 ccggggcatggcggtcggaggcgaaggcgatccactcgccgtcg 1668
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 272 bits (137), Expect = 1e-69 Identities = 341/408 (83%), Gaps = 7/408 (1%) Strand = Plus / Plus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || |||||||| |||| ||||| || |||| Sbjct: 122517 tgagccagtggcaatcctggaacgcgcacctgcctgaggcttgcagcgtctcacctacgt 122576 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 ||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122577 cccgggggtccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 122636 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||| | ||||| ||||| ||||||| Sbjct: 122637 tgagccgccggatgttggacccgtcgatgtcgacggtgtagatctcgccgtatggctggt 122696 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 122697 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 122756 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtt----tgtcctgccgccgtccgcgctg 517 || ||||||||| | |||||||| |||||||| |||| ||||||||| ||||| Sbjct: 122757 ggctcttggagtctgaactgaaccatgggtggttggtcggtccggccgccgtcgccgctg 122816 Query: 518 tgcaccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccg 577 |||||||||| |||| |||||||| || ||||||||||| |||||||||||||||| Sbjct: 122817 tgcaccacccgccgcaacccggtgccattggggtgcaccat---gatggcgaagctgccg 122873 Query: 578 cctcccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 | |||||| || ||||||||||||||||||||||||||| ||||| Sbjct: 122874 ctccccggggcatggcggtcggaggcgaaggcgatccactcgtcgtcg 122921
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 272 bits (137), Expect = 1e-69 Identities = 341/408 (83%), Gaps = 7/408 (1%) Strand = Plus / Plus Query: 222 tgagccagtggcagtcctggaacgcgcagctccctgaggcgcgcagggtctcgccgacgt 281 ||||||||||||| |||||||||||||| || |||||||| |||| ||||| || |||| Sbjct: 11799739 tgagccagtggcaatcctggaacgcgcacctgcctgaggcttgcagcgtctcacctacgt 11799798 Query: 282 cccggggctcgaggaagtgcggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 341 ||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 11799799 cccgggggtccaggaagtatggcgtccacgacggcgtgccgtcctcgaacgagttgtgcg 11799858 Query: 342 tgagccgctggagccccgagccgtcgatgttgatggtgaatatctccccgtagggctggt 401 |||||||| ||| || |||||||||| || |||| | ||||| ||||| ||||||| Sbjct: 11799859 tgagccgccggatgttggacccgtcgatgtcgacggtgtagatctcgccgtatggctggt 11799918 Query: 402 agtggtgcgggttcgaaatgggctcggcggaaacggcggcgaggtccgaggtgaacacca 461 | ||||| ||||| || | ||||||||||| ||||||||| ||| |||||||| || | Sbjct: 11799919 aatggtgagggttggagaccggctcggcggagacggcggcgtagtcggaggtgaagacga 11799978 Query: 462 tgcgcttggagtccgggctgaaccaagggtggtt----tgtcctgccgccgtccgcgctg 517 || ||||||||| | |||||||| |||||||| |||| ||||||||| ||||| Sbjct: 11799979 ggctcttggagtctgaactgaaccatgggtggttggtcggtccggccgccgtcgccgctg 11800038 Query: 518 tgcaccaccctacgcagcccggtgctgttcgggtgcaccatgtagatggcgaagctgccg 577 |||||||||| |||| |||||||| || ||||||||||| |||||||||||||||| Sbjct: 11800039 tgcaccacccgccgcaacccggtgccattggggtgcaccat---gatggcgaagctgccg 11800095 Query: 578 cctcccgggttgtgccggtcggaggcgaaggcgatccactcgccgtcg 625 | |||||| || ||||||||||||||||||||||||||| ||||| Sbjct: 11800096 ctccccggggcatggcggtcggaggcgaaggcgatccactcgtcgtcg 11800143
>emb|CR956405.10| Pig DNA sequence from clone CH242-240K6 on chromosome 17, complete sequence Length = 135681 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 496 tgtcctgccgccgtccgcgctg 517 |||||||||||||||||||||| Sbjct: 128170 tgtcctgccgccgtccgcgctg 128149
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 atacagatacagtactaattaa 73 |||||||||||||||||||||| Sbjct: 166801 atacagatacagtactaattaa 166780
>emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BAC clone F20O9 (ESSA project) Length = 93695 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 atacagatacagtactaattaa 73 |||||||||||||||||||||| Sbjct: 28884 atacagatacagtactaattaa 28863
>gb|AE005686.1| Caulobacter crescentus CB15 section 12 of 359 of the complete genome Length = 11992 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 592 ccggtcggaggcgaaggcgatccactcgccgtcg 625 ||||||||||| ||||||||||| || ||||||| Sbjct: 1415 ccggtcggaggtgaaggcgatccgcttgccgtcg 1382
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 604 gaaggcgatccactcgccgtcg 625 |||||||||||||||||||||| Sbjct: 4253456 gaaggcgatccactcgccgtcg 4253477
>gb|AY940090.1| Delftia tsuruhatensis strain AD9 transposase (tnpA-L1) gene, partial cds; tad gene cluster, complete sequence; transcriptional regulator (orfX), hydrolase/acyltransferase (orfY), and muconate cycloisomerase (orfZ) genes, complete cds; and transposase (tnpA-L2) gene, partial cds Length = 24681 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gaggtgaacaccatgcgcttg 469 ||||||||||||||||||||| Sbjct: 6263 gaggtgaacaccatgcgcttg 6283
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ccgtccgcgctgtgcaccacc 526 ||||||||||||||||||||| Sbjct: 2646150 ccgtccgcgctgtgcaccacc 2646170
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the Psme4 gene for proteasome (prosome, macropain) activator subunit 4, the Gpr75 gene for G protein-coupled receptor 75, a novel pseudogene, a PDZ and LIM domain 1 (elfin) (Pdlim1) pseudogene, two novel genes, the 5' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3, a methyl-CpG binding domain protein 2 interacting protein (Mbdin) pseudogene and a CpG island, complete sequence Length = 244971 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 atttatactatacagcaggca 116 ||||||||||||||||||||| Sbjct: 169439 atttatactatacagcaggca 169459
>dbj|AK133874.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730472D08 product:hypothetical Mannose-6-phosphate receptor, binding containing protein, full insert sequence Length = 2514 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 atttatactatacagcaggca 116 ||||||||||||||||||||| Sbjct: 2255 atttatactatacagcaggca 2235
>dbj|AK162571.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630017I02 product:hypothetical protein, full insert sequence Length = 2271 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 atttatactatacagcaggca 116 ||||||||||||||||||||| Sbjct: 1023 atttatactatacagcaggca 1003
>gb|AY105409.1| Zea mays PCO095801 mRNA sequence Length = 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gccgacgtcccggggctcgag 294 ||||||||||||||||||||| Sbjct: 508 gccgacgtcccggggctcgag 528
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 374 atggtgaatatctccccgtagggctggtagtggtgcgggtt 414 ||||||||||| || || |||||||||||| ||||||||| Sbjct: 98765 atggtgaatatttcaccatagggctggtaggcgtgcgggtt 98805
>dbj|D85415.2| Pseudomonas putida UCC22 plasmid pTDN1 genes for conversion of aniline to catechol, aniline degradation lower-pathway gene cluster, regulatory protein and transposase, partial and complete cds Length = 25404 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gaggtgaacaccatgcgcttg 469 ||||||||||||||||||||| Sbjct: 6254 gaggtgaacaccatgcgcttg 6274
>gb|AC166346.5| Mus musculus BAC clone RP24-83P13 from chromosome 16, complete sequence Length = 199678 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gccagtggcagtcctggaac 244 |||||||||||||||||||| Sbjct: 129951 gccagtggcagtcctggaac 129932
>gb|AC166832.2| Mus musculus BAC clone RP23-220N17 from chromosome 16, complete sequence Length = 172644 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gccagtggcagtcctggaac 244 |||||||||||||||||||| Sbjct: 160688 gccagtggcagtcctggaac 160669
>gb|AC111131.8| Mus musculus, clone RP23-340N7, complete sequence Length = 202386 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 catgctctccttggtatcat 134 |||||||||||||||||||| Sbjct: 76963 catgctctccttggtatcat 76982
>emb|AL121895.26|HSA234K24 Human DNA sequence from clone RP11-234K24 on chromosome 20 Contains a novel gene, the 3' end of the EPB41L1 gene for the erythrocyte membrane protein band 4.1-like protein, the C20orf4 gene for chromosome 20 open reading frame 4 and a CpG island, complete sequence Length = 153192 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 tgctgagccagtggcagtcctgga 242 ||||||||||||||||| |||||| Sbjct: 11583 tgctgagccagtggcagacctgga 11606
>emb|AL669907.6| Mouse DNA sequence from clone RP23-245A5 on chromosome 11 Contains part of a crumbs-like protein precursor pseudogene, complete sequence Length = 156193 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ttattcctgagcaatacaga 58 |||||||||||||||||||| Sbjct: 23635 ttattcctgagcaatacaga 23616
>gb|AC078903.11| Homo sapiens chromosome 17, clone RP11-1084K4, complete sequence Length = 95359 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gccgctggagccccgagccg 364 |||||||||||||||||||| Sbjct: 51653 gccgctggagccccgagccg 51672
>gb|DQ397604.1| Cenarchaeum symbiosum clone C08G10, complete sequence Length = 37232 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gtttgtcctgccgccgtccg 512 |||||||||||||||||||| Sbjct: 34754 gtttgtcctgccgccgtccg 34735
>gb|DQ397599.1| Cenarchaeum symbiosum clone C06H12, complete sequence Length = 37698 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 gtttgtcctgccgccgtccg 512 |||||||||||||||||||| Sbjct: 19998 gtttgtcctgccgccgtccg 20017
>emb|BX005255.10| Mouse DNA sequence from clone RP23-228N14 on chromosome X, complete sequence Length = 230114 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 catgctctccttggtatcat 134 |||||||||||||||||||| Sbjct: 60806 catgctctccttggtatcat 60825
>emb|BX927077.10| Zebrafish DNA sequence from clone DKEY-119M17 in linkage group 19, complete sequence Length = 239130 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcaaacatttatactataca 109 |||||||||||||||||||| Sbjct: 10095 gcaaacatttatactataca 10114
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgcgcagggtctcgccgacg 280 |||||||||||||||||||| Sbjct: 2401633 cgcgcagggtctcgccgacg 2401652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,306,012 Number of Sequences: 3902068 Number of extensions: 4306012 Number of successful extensions: 162818 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 162490 Number of HSP's gapped (non-prelim): 324 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)