ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20e17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full... 589 e-165
2ref|XM_470491.1| Oryza sativa (japonica cultivar-group), mRNA 224 3e-55
3dbj|AK100745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
4dbj|AK072679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
5gb|AY109392.1| Zea mays CL1001_1 mRNA sequence 165 2e-37
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 3e-24
7gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 121 3e-24
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
9gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete s... 94 7e-16
10gb|AY731575.1| Arachis hypogaea clone PM421 microsatellite sequence 48 0.036
11emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chro... 44 0.56
12gb|BC036799.1| Homo sapiens, clone IMAGE:5590162, mRNA 44 0.56
13gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.2
14emb|BX539313.4| Zebrafish DNA sequence from clone DKEYP-84F3 in ... 42 2.2
15emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 i... 42 2.2
16emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 i... 42 2.2
17emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in ... 42 2.2
18ref|NM_121708.2| Arabidopsis thaliana XPO1A; protein transporter... 40 8.8
19gb|BC085366.1| Danio rerio zgc:101553, mRNA (cDNA clone MGC:1015... 40 8.8
20ref|NM_001007419.1| Danio rerio zgc:101553 (zgc:101553), mRNA 40 8.8
21gb|AC109268.10| Mus musculus chromosome 1, clone RP23-305F24, co... 40 8.8
22ref|XM_369807.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.8
23gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome... 40 8.8
24gb|AY575851.1| Homo sapiens TNFRSF1A-associated via death domain... 40 8.8
25gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosom... 40 8.8
26gb|AC125164.3| Mus musculus BAC clone RP24-423L16 from chromosom... 40 8.8
27gb|AE014075.1| Escherichia coli CFT073, complete genome 40 8.8
28gb|CP000243.1| Escherichia coli UTI89, complete genome 40 8.8
29emb|AL596330.6| Human DNA sequence from clone RP11-3L21 on chrom... 40 8.8
30gb|AY096633.1| Arabidopsis thaliana putative Exportin1 (XPO1) pr... 40 8.8
31gb|AY056126.1| Arabidopsis thaliana putative exportin1 protein X... 40 8.8
32emb|AL929414.5| Mouse DNA sequence from clone RP23-222A19 on chr... 40 8.8
33gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, co... 40 8.8
34gb|AC023533.6| Homo sapiens chromosome 8, clone RP11-288G19, com... 40 8.8
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
36gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H... 40 8.8
37gb|AC074143.5| Homo sapiens chromosome 16 clone RP11-5A19, compl... 40 8.8
38gb|AY995114.1| Homo sapiens tumor necrosis factor receptor 1-ass... 40 8.8
39dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
40dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41emb|Y18469.1|ATHY18469 Arabidopsis thaliana mRNA for Exportin1 (... 40 8.8
42gb|AC151746.3| Mus musculus BAC clone RP23-19M11 from 9, complet... 40 8.8
43emb|AJ311614.2|HSA311614 Homo sapiens partial TRADD gene for TNF... 40 8.8
44gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 8.8
45dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 8.8
46dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.8
47dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.8
48gb|CP000036.1| Shigella boydii Sb227, complete genome 40 8.8
49gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 8.8
50emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on ch... 40 8.8 
>gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full insert mRNA
           sequence
          Length = 890

 Score =  589 bits (297), Expect = e-165
 Identities = 366/387 (94%), Gaps = 14/387 (3%)
 Strand = Plus / Minus

                                                                       
Query: 271 ccctatcatcaactagca---caaatcttggaatcgccgaaccggaaataaaattacagc 327
           ||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||
Sbjct: 590 ccctatcatcaactagcagcacaaatcttggaatcgccaaaccggaaataaaattacagc 531

                                                                       
Query: 328 aggca---ccctcctttcaccacaaccacc---ctggaagaaaactctggctccgggaca 381
           |||||   ||||||||||||||| ||||||   |||||||||||||| ||||||||||||
Sbjct: 530 aggcatcaccctcctttcaccaccaccaccaccctggaagaaaactcaggctccgggaca 471

                                                                       
Query: 382 tggaggcctctggaggcctaatcaaacatcaaactggattagcaatgcag-----aatca 436
           ||||||||||||||||||||||| | ||||||||||||||||||||||||     |||||
Sbjct: 470 tggaggcctctggaggcctaatcgaccatcaaactggattagcaatgcagtgcacaatca 411

                                                                       
Query: 437 cagagcactatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccctggga 496
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 410 cagagcactatgagtctaccatctcatcttgcaattcgcttggggcaatcagccctggga 351

                                                                       
Query: 497 tggcaagcatccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagat 556
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tggcaagcatccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagat 291

                                                                       
Query: 557 ccttgttatcctgggctgagaactcctttgattgcaccaggaagtccctaatatggtttt 616
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccttgttatcctgggctgagaactcctttgattgcaccaggaagtccctaatatggtttt 231

                                      
Query: 617 tgaagcttgggaggtcatgtctcgaac 643
           |||||||||||||||||||||||||||
Sbjct: 230 tgaagcttgggaggtcatgtctcgaac 204



 Score =  226 bits (114), Expect = 7e-56
 Identities = 132/137 (96%), Gaps = 1/137 (0%)
 Strand = Plus / Minus

                                                                       
Query: 79  catnataatacagtcatcaaatctatagactaaactaacaattaaggatcaacatccata 138
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 catcataatacagtcatcaaatctatagactaaactaacaattaaggatcaacatccata 705

                                                                       
Query: 139 ctatatcatgctcagcacacgcacaaaatgtttcaccgagcacttaaaacacatccatct 198
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 704 ctatatcatgctcagcacacgcacaaaatgtttcaccgagcac-taaaacacatccatct 646

                            
Query: 199 aaccatccacacagccc 215
           | ||| ||| |||||||
Sbjct: 645 agccaaccaaacagccc 629
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>ref|XM_470491.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3679

 Score =  224 bits (113), Expect = 3e-55
 Identities = 197/224 (87%), Gaps = 2/224 (0%)
 Strand = Plus / Minus

                                                                        
Query: 413  aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 472
            |||||||||||||| || ||||||||||  | ||||| || |||||||| ||||| ||||
Sbjct: 3242 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 3185

                                                                        
Query: 473  cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 532
            |||| |||||||| |||||||| ||||||||||| ||||| |  ||| | ||||||||| 
Sbjct: 3184 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 3125

                                                                        
Query: 533  ccgcagcctcttccgcatacagatccttgttatcctgggctgagaactcctttgattgca 592
            | ||||||||||| ||||||| |||||| |||||||| || |||||||||||||||||||
Sbjct: 3124 cagcagcctcttcagcatacaaatccttattatcctgagccgagaactcctttgattgca 3065

                                                        
Query: 593  ccaggaagtccctaatatggtttttgaagcttgggaggtcatgt 636
            ||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 3064 ccaggaaatccctaatatggtttttgaagcttggaaggtcatgt 3021



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 307  aaccggaaataaaattacagcaggcaccctcctttcaccac 347
            ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 3350 aaccgaaaataaaattacagcaggca-ccttctttcaccac 3311
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>dbj|AK100745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118H18, full
            insert sequence
          Length = 3882

 Score =  224 bits (113), Expect = 3e-55
 Identities = 197/224 (87%), Gaps = 2/224 (0%)
 Strand = Plus / Minus

                                                                        
Query: 413  aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 472
            |||||||||||||| || ||||||||||  | ||||| || |||||||| ||||| ||||
Sbjct: 3479 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 3422

                                                                        
Query: 473  cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 532
            |||| |||||||| |||||||| ||||||||||| ||||| |  ||| | ||||||||| 
Sbjct: 3421 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 3362

                                                                        
Query: 533  ccgcagcctcttccgcatacagatccttgttatcctgggctgagaactcctttgattgca 592
            | ||||||||||| ||||||| |||||| |||||||| || |||||||||||||||||||
Sbjct: 3361 cagcagcctcttcagcatacaaatccttattatcctgagccgagaactcctttgattgca 3302

                                                        
Query: 593  ccaggaagtccctaatatggtttttgaagcttgggaggtcatgt 636
            ||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 3301 ccaggaaatccctaatatggtttttgaagcttggaaggtcatgt 3258



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 307  aaccggaaataaaattacagcaggcaccctcctttcaccac 347
            ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 3587 aaccgaaaataaaattacagcaggca-ccttctttcaccac 3548
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>dbj|AK072679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136O19, full
            insert sequence
          Length = 1597

 Score =  224 bits (113), Expect = 3e-55
 Identities = 197/224 (87%), Gaps = 2/224 (0%)
 Strand = Plus / Minus

                                                                        
Query: 413  aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 472
            |||||||||||||| || ||||||||||  | ||||| || |||||||| ||||| ||||
Sbjct: 1186 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 1129

                                                                        
Query: 473  cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 532
            |||| |||||||| |||||||| ||||||||||| ||||| |  ||| | ||||||||| 
Sbjct: 1128 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 1069

                                                                        
Query: 533  ccgcagcctcttccgcatacagatccttgttatcctgggctgagaactcctttgattgca 592
            | ||||||||||| ||||||| |||||| |||||||| || |||||||||||||||||||
Sbjct: 1068 cagcagcctcttcagcatacaaatccttattatcctgagccgagaactcctttgattgca 1009

                                                        
Query: 593  ccaggaagtccctaatatggtttttgaagcttgggaggtcatgt 636
            ||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 1008 ccaggaaatccctaatatggtttttgaagcttggaaggtcatgt 965



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 307  aaccggaaataaaattacagcaggcaccctcctttcaccac 347
            ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 1294 aaccgaaaataaaattacagcaggca-ccttctttcaccac 1255
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>gb|AY109392.1| Zea mays CL1001_1 mRNA sequence
          Length = 2488

 Score =  165 bits (83), Expect = 2e-37
 Identities = 149/171 (87%)
 Strand = Plus / Plus

                                                                       
Query: 442 cactatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccctgggatggca 501
           ||||| || |||||||||||||||||||| |||||||||||||| ||||| || ||||||
Sbjct: 571 cactacgaatctaccatctcgtcttgcaactcgctaggggcaatgagccccggaatggca 630

                                                                       
Query: 502 agcatccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagatccttg 561
           ||||| ||||| |  ||| | ||||||||  | |||||||||||||| || |||||||||
Sbjct: 631 agcatacgttggcgctccctctctctttgggcagcagcctcttccgcgtatagatccttg 690

                                                              
Query: 562 ttatcctgggctgagaactcctttgattgcaccaggaagtccctaatatgg 612
           ||||||||  ||||||||||||| || |||||||||||||| |||||||||
Sbjct: 691 ttatcctgaactgagaactccttggactgcaccaggaagtctctaatatgg 741



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 316 taaaattacagcaggcaccctcctttcaccac 347
           ||||||||||||||||| ||| ||||||||||
Sbjct: 445 taaaattacagcaggca-ccttctttcaccac 475
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/156 (85%), Gaps = 2/156 (1%)
 Strand = Plus / Plus

                                                                            
Query: 413      aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 472
                |||||||||||||| || ||||||||||  | ||||| || |||||||| ||||| ||||
Sbjct: 35909289 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 35909346

                                                                            
Query: 473      cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 532
                |||| |||||||| |||||||| ||||||||||| ||||| |  ||| | ||||||||| 
Sbjct: 35909347 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 35909406

                                                    
Query: 533      ccgcagcctcttccgcatacagatccttgttatcct 568
                | ||||||||||| ||||||| |||||| |||||||
Sbjct: 35909407 cagcagcctcttcagcatacaaatccttattatcct 35909442



 Score =  109 bits (55), Expect = 1e-20
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                            
Query: 574      gagaactcctttgattgcaccaggaagtccctaatatggtttttgaagcttgggaggtca 633
                |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 35909890 gagaactcctttgattgcaccaggaaatccctaatatggtttttgaagcttggaaggtca 35909949

                   
Query: 634      tgt 636
                |||
Sbjct: 35909950 tgt 35909952



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                         
Query: 307      aaccggaaataaaattacagcaggcaccctcctttcaccac 347
                ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 35909181 aaccgaaaataaaattacagcaggca-ccttctttcaccac 35909220



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 187      acacatccatctaaccatccacaca 211
                ||||||||||||| |||||||||||
Sbjct: 13143748 acacatccatctatccatccacaca 13143772
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/156 (85%), Gaps = 2/156 (1%)
 Strand = Plus / Minus

                                                                         
Query: 413   aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 472
             |||||||||||||| || ||||||||||  | ||||| || |||||||| ||||| ||||
Sbjct: 51836 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 51779

                                                                         
Query: 473   cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 532
             |||| |||||||| |||||||| ||||||||||| ||||| |  ||| | ||||||||| 
Sbjct: 51778 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 51719

                                                 
Query: 533   ccgcagcctcttccgcatacagatccttgttatcct 568
             | ||||||||||| ||||||| |||||| |||||||
Sbjct: 51718 cagcagcctcttcagcatacaaatccttattatcct 51683



 Score =  109 bits (55), Expect = 1e-20
 Identities = 61/63 (96%)
 Strand = Plus / Minus

                                                                         
Query: 574   gagaactcctttgattgcaccaggaagtccctaatatggtttttgaagcttgggaggtca 633
             |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 51235 gagaactcctttgattgcaccaggaaatccctaatatggtttttgaagcttggaaggtca 51176

                
Query: 634   tgt 636
             |||
Sbjct: 51175 tgt 51173



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                      
Query: 307   aaccggaaataaaattacagcaggcaccctcctttcaccac 347
             ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 51944 aaccgaaaataaaattacagcaggca-ccttctttcaccac 51905
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/156 (85%), Gaps = 2/156 (1%)
 Strand = Plus / Plus

                                                                            
Query: 413      aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 472
                |||||||||||||| || ||||||||||  | ||||| || |||||||| ||||| ||||
Sbjct: 35999419 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 35999476

                                                                            
Query: 473      cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 532
                |||| |||||||| |||||||| ||||||||||| ||||| |  ||| | ||||||||| 
Sbjct: 35999477 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 35999536

                                                    
Query: 533      ccgcagcctcttccgcatacagatccttgttatcct 568
                | ||||||||||| ||||||| |||||| |||||||
Sbjct: 35999537 cagcagcctcttcagcatacaaatccttattatcct 35999572



 Score =  109 bits (55), Expect = 1e-20
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                            
Query: 574      gagaactcctttgattgcaccaggaagtccctaatatggtttttgaagcttgggaggtca 633
                |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 36000020 gagaactcctttgattgcaccaggaaatccctaatatggtttttgaagcttggaaggtca 36000079

                   
Query: 634      tgt 636
                |||
Sbjct: 36000080 tgt 36000082



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                         
Query: 307      aaccggaaataaaattacagcaggcaccctcctttcaccac 347
                ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 35999311 aaccgaaaataaaattacagcaggca-ccttctttcaccac 35999350



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 187      acacatccatctaaccatccacaca 211
                ||||||||||||| |||||||||||
Sbjct: 13140523 acacatccatctatccatccacaca 13140547
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>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence
          Length = 124550

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                         
Query: 444   ctatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccctgggatggcaag 503
             ||||||||| ||||| || |||||||| ||| | ||||||||||||||||| || | |||
Sbjct: 51640 ctatgagtccaccatttcatcttgcaactcgattggggcaatcagccctggaatagaaag 51699

                                                                         
Query: 504   catccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagatccttgtt 563
             ||| | ||||| |||  ||||||| ||  ||||||||||||| ||||| ||||| |||||
Sbjct: 51700 cattctttgccgttctctttctctctgagccgcagcctcttcagcatagagatctttgtt 51759

                    
Query: 564   atcctgg 570
             |||||||
Sbjct: 51760 atcctgg 51766
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>gb|AY731575.1| Arachis hypogaea clone PM421 microsatellite sequence
          Length = 355

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 444 ctatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccc 491
           |||||| || ||||| || |||||||||||||| |||||||| |||||
Sbjct: 281 ctatgaatccaccatttcatcttgcaattcgctcggggcaataagccc 234
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>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
              novel genes, the 5' end of a novel gene, a novel pseudogene
              and seven CpG islands, complete sequence
          Length = 165696

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 376    gggacatggaggcctctggagg 397
              ||||||||||||||||||||||
Sbjct: 156385 gggacatggaggcctctggagg 156406
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>gb|BC036799.1| Homo sapiens, clone IMAGE:5590162, mRNA
          Length = 2035

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 376  gggacatggaggcctctggagg 397
            ||||||||||||||||||||||
Sbjct: 1727 gggacatggaggcctctggagg 1706
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>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
             from chromosome 3, complete sequence
          Length = 151173

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 187   acacatccatctaaccatccacaca 211
             ||||||||||||| |||||||||||
Sbjct: 82890 acacatccatctatccatccacaca 82866
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>emb|BX539313.4| Zebrafish DNA sequence from clone DKEYP-84F3 in linkage group 16,
             complete sequence
          Length = 215158

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 511   tgcctttccttttctctttgt 531
             |||||||||||||||||||||
Sbjct: 23799 tgcctttccttttctctttgt 23819
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>emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 in linkage group 7,
             complete sequence
          Length = 30205

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   atccatctaaccatccacaca 211
             |||||||||||||||||||||
Sbjct: 16520 atccatctaaccatccacaca 16500
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>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7,
             complete sequence
          Length = 192578

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 191   atccatctaaccatccacaca 211
             |||||||||||||||||||||
Sbjct: 49523 atccatctaaccatccacaca 49543
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>emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in linkage group 7,
            complete sequence
          Length = 19313

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 191  atccatctaaccatccacaca 211
            |||||||||||||||||||||
Sbjct: 2794 atccatctaaccatccacaca 2814
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>ref|NM_121708.2| Arabidopsis thaliana XPO1A; protein transporter AT5G17020 (XPO1A)
            mRNA, complete cds
          Length = 3884

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 547  gcatacagatccttgttatcctgggctgagaactcctttgattgcaccaggaagtc 602
            ||||| ||||| ||||||||||| || || |||||||| || || || ||||||||
Sbjct: 3293 gcatagagatctttgttatcctgagcggaaaactccttagactgtacaaggaagtc 3238
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>gb|BC085366.1| Danio rerio zgc:101553, mRNA (cDNA clone MGC:101553 IMAGE:7215973),
            complete cds
          Length = 1916

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  cctggaagaaaactctggct 373
            ||||||||||||||||||||
Sbjct: 1283 cctggaagaaaactctggct 1302
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>ref|NM_001007419.1| Danio rerio zgc:101553 (zgc:101553), mRNA
          Length = 1916

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  cctggaagaaaactctggct 373
            ||||||||||||||||||||
Sbjct: 1283 cctggaagaaaactctggct 1302
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>gb|AC109268.10| Mus musculus chromosome 1, clone RP23-305F24, complete sequence
          Length = 160975

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   ttgcctttccttttctcttt 529
             ||||||||||||||||||||
Sbjct: 68807 ttgcctttccttttctcttt 68826
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>ref|XM_369807.1| Magnaporthe grisea 70-15 hypothetical protein (MG06322.4) partial
           mRNA
          Length = 1281

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 274 tatcatcaactagcacaaatcttg 297
           ||||| ||||||||||||||||||
Sbjct: 491 tatcaacaactagcacaaatcttg 514
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>gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome 9, complete sequence
          Length = 170896

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   acaaccaccctggaagaaaa 365
             ||||||||||||||||||||
Sbjct: 18672 acaaccaccctggaagaaaa 18653
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>gb|AY575851.1| Homo sapiens TNFRSF1A-associated via death domain (TRADD) gene,
            complete cds
          Length = 9002

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  cccacaaaatgctccaggcc 232
            ||||||||||||||||||||
Sbjct: 5416 cccacaaaatgctccaggcc 5397
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>gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosome 5, complete sequence
          Length = 200384

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    catccatctaaccatccaca 209
              ||||||||||||||||||||
Sbjct: 156892 catccatctaaccatccaca 156911
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>gb|AC125164.3| Mus musculus BAC clone RP24-423L16 from chromosome 1, complete sequence
          Length = 133335

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    ttgcctttccttttctcttt 529
              ||||||||||||||||||||
Sbjct: 130976 ttgcctttccttttctcttt 130995
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 480     ggcaatcagccctgggatgg 499
               ||||||||||||||||||||
Sbjct: 1694401 ggcaatcagccctgggatgg 1694382
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 480     ggcaatcagccctgggatgg 499
               ||||||||||||||||||||
Sbjct: 1575185 ggcaatcagccctgggatgg 1575166
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>emb|AL596330.6| Human DNA sequence from clone RP11-3L21 on chromosome 1 Contains the 3'
             end of the gene for a novel protein (FLJ38993) and a novel
             gene, complete sequence
          Length = 79657

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   ctctggctccgggacatgga 385
             ||||||||||||||||||||
Sbjct: 11945 ctctggctccgggacatgga 11926
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>gb|AY096633.1| Arabidopsis thaliana putative Exportin1 (XPO1) protein (At5g17020)
            mRNA, complete cds
          Length = 3259

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 547  gcatacagatccttgttatcctgggctgagaactcctttgattgcaccaggaagtc 602
            ||||| ||||| ||||||||||| || || |||||||| || || || ||||||||
Sbjct: 3125 gcatagagatctttgttatcctgagcggaaaactccttagactgtacaaggaagtc 3070
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>gb|AY056126.1| Arabidopsis thaliana putative exportin1 protein XPO1 (At5g17020)
            mRNA, complete cds
          Length = 3854

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 547  gcatacagatccttgttatcctgggctgagaactcctttgattgcaccaggaagtc 602
            ||||| ||||| ||||||||||| || || |||||||| || || || ||||||||
Sbjct: 3293 gcatagagatctttgttatcctgagcggaaaactccttagactgtacaaggaagtc 3238
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>emb|AL929414.5| Mouse DNA sequence from clone RP23-222A19 on chromosome 11, complete
              sequence
          Length = 153928

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    cctttccttttctctttgta 532
              ||||||||||||||||||||
Sbjct: 151814 cctttccttttctctttgta 151833
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>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence
          Length = 159617

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   agcacacgcacaaaatgttt 171
             ||||||||||||||||||||
Sbjct: 29581 agcacacgcacaaaatgttt 29600
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>gb|AC023533.6| Homo sapiens chromosome 8, clone RP11-288G19, complete sequence
          Length = 193083

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    cacacagcccacaaaatgct 225
              ||||||||||||||||||||
Sbjct: 107964 cacacagcccacaaaatgct 107983
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      tagactaaactaacaattaa 123
                ||||||||||||||||||||
Sbjct: 22248312 tagactaaactaacaattaa 22248331
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>gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H1, complete sequence
          Length = 209574

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    cccacaaaatgctccaggcc 232
              ||||||||||||||||||||
Sbjct: 182359 cccacaaaatgctccaggcc 182340
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>gb|AC074143.5| Homo sapiens chromosome 16 clone RP11-5A19, complete sequence
          Length = 152952

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    cccacaaaatgctccaggcc 232
              ||||||||||||||||||||
Sbjct: 125090 cccacaaaatgctccaggcc 125109
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>gb|AY995114.1| Homo sapiens tumor necrosis factor receptor 1-associated death domain
            protein (TRADD) gene, complete cds
          Length = 12021

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  cccacaaaatgctccaggcc 232
            ||||||||||||||||||||
Sbjct: 5845 cccacaaaatgctccaggcc 5826
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>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0070E11
          Length = 142855

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tagactaaactaacaattaa 123
             ||||||||||||||||||||
Sbjct: 68210 tagactaaactaacaattaa 68229
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>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1155_H10
          Length = 140475

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tagactaaactaacaattaa 123
             ||||||||||||||||||||
Sbjct: 10320 tagactaaactaacaattaa 10339
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>emb|Y18469.1|ATHY18469 Arabidopsis thaliana mRNA for Exportin1 (XPO1) protein
          Length = 3768

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 547  gcatacagatccttgttatcctgggctgagaactcctttgattgcaccaggaagtc 602
            ||||| ||||| ||||||||||| || || |||||||| || || || ||||||||
Sbjct: 3220 gcatagagatctttgttatcctgagcggaaaactccttagactgtacaaggaagtc 3165
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>gb|AC151746.3| Mus musculus BAC clone RP23-19M11 from 9, complete sequence
          Length = 168291

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    acaaccaccctggaagaaaa 365
              ||||||||||||||||||||
Sbjct: 166695 acaaccaccctggaagaaaa 166676
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>emb|AJ311614.2|HSA311614 Homo sapiens partial TRADD gene for TNFRSF1A-associated via death
           domain,exon 2 and joined CDS
          Length = 704

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 cccacaaaatgctccaggcc 232
           ||||||||||||||||||||
Sbjct: 520 cccacaaaatgctccaggcc 501
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 480     ggcaatcagccctgggatgg 499
               ||||||||||||||||||||
Sbjct: 2069051 ggcaatcagccctgggatgg 2069070
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 480     ggcaatcagccctgggatgg 499
               ||||||||||||||||||||
Sbjct: 2019424 ggcaatcagccctgggatgg 2019405
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>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592,
             complete sequence
          Length = 96561

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 538   gcctcttccgcatacagatccttgttatcctg 569
             |||||||| ||||| ||||| |||||||||||
Sbjct: 76263 gcctcttcagcataaagatctttgttatcctg 76232
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>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 538   gcctcttccgcatacagatccttgttatcctg 569
             |||||||| ||||| ||||| |||||||||||
Sbjct: 36774 gcctcttcagcataaagatctttgttatcctg 36743
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 480     ggcaatcagccctgggatgg 499
               ||||||||||||||||||||
Sbjct: 1640163 ggcaatcagccctgggatgg 1640182
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 480     ggcaatcagccctgggatgg 499
               ||||||||||||||||||||
Sbjct: 1815909 ggcaatcagccctgggatgg 1815928
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>emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on chromosome 11, complete
              sequence
          Length = 162556

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    ctttccttttctctttgtac 533
              ||||||||||||||||||||
Sbjct: 149113 ctttccttttctctttgtac 149132


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,620,852
Number of Sequences: 3902068
Number of extensions: 5620852
Number of successful extensions: 104259
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103956
Number of HSP's gapped (non-prelim): 292
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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