| Clone Name | rbaal20e04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 359 bits (181), Expect = 8e-96 Identities = 349/405 (86%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 32432037 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 32431978 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 32431977 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 32431918 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 32431917 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 32431858 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 32431857 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 32431798 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 32431797 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 32431738 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 32431737 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 32431678 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 32431677 tgctcggtccagtactgatttaataataagagaagccccatcacc 32431633
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 359 bits (181), Expect = 8e-96 Identities = 349/405 (86%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 19558 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 19499 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 19498 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 19439 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 19438 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 19379 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 19378 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 19319 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 19318 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 19259 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 19258 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 19199 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 19198 tgctcggtccagtactgatttaataataagagaagccccatcacc 19154
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 359 bits (181), Expect = 8e-96 Identities = 349/405 (86%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 111534 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 111475 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 111474 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 111415 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 111414 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 111355 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 111354 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 111295 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 111294 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 111235 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 111234 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 111175 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 111174 tgctcggtccagtactgatttaataataagagaagccccatcacc 111130
>dbj|AK072195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151K20, full insert sequence Length = 3262 Score = 359 bits (181), Expect = 8e-96 Identities = 349/405 (86%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 2605 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 2546 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 2545 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 2486 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 2485 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 2426 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 2425 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 2366 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 2365 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 2306 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 2305 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 2246 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 2245 tgctcggtccagtactgatttaataataagagaagccccatcacc 2201
>dbj|AK070157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046D01, full insert sequence Length = 3981 Score = 359 bits (181), Expect = 8e-96 Identities = 349/405 (86%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 2603 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 2544 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 2543 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 2484 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 2483 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 2424 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 2423 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 2364 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 2363 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 2304 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 2303 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 2244 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 2243 tgctcggtccagtactgatttaataataagagaagccccatcacc 2199
>dbj|AK065855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042G10, full insert sequence Length = 2473 Score = 359 bits (181), Expect = 8e-96 Identities = 349/405 (86%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 1829 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 1770 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 1769 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 1710 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 1709 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 1650 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 1649 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 1590 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 1589 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 1530 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 1529 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 1470 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 1469 tgctcggtccagtactgatttaataataagagaagccccatcacc 1425
>ref|NM_191402.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2292 Score = 351 bits (177), Expect = 2e-93 Identities = 291/329 (88%) Strand = Plus / Minus Query: 356 gttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggctt 415 |||| |||||| ||||||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 2147 gttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtttgtatgaggaaggctt 2088 Query: 416 gcacgtagcaactcaactggcatctccctgctagttgcctgggaggcttcagatccaatc 475 |||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||| | Sbjct: 2087 gcacgtagcaactcaactggcatctccctgctggttgctttcgagacttcagatccagtt 2028 Query: 476 acagagcctgatgcctgcatccgaaacatctgcaaaatactttcatacttactgaggcag 535 ||||||| || || |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 2027 acagagcatggtgactgcatgacaaacatctgcttaatactttcatacttactgaggcag 1968 Query: 536 tactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtttgac 595 || |||||||| || |||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1967 tattttgtcaggagtccaaagaaagcatcaaatgatgcctgccagagagttcggtttgac 1908 Query: 596 gaggtatagctggatacagcatgctgatcagtcagtaactcagttgctcggtccagtact 655 |||||||||| | ||||||| || |||||||| ||||| |||||||||||||||||| Sbjct: 1907 actgtatagctggctgcagcatggtggtcagtcagcaactcggttgctcggtccagtact 1848 Query: 656 gacttgatgataagagaagccccgtcacc 684 || || || |||||||||||||| ||||| Sbjct: 1847 gatttaataataagagaagccccatcacc 1819
>dbj|AK100439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089F03, full insert sequence Length = 3369 Score = 351 bits (177), Expect = 2e-93 Identities = 348/405 (85%) Strand = Plus / Minus Query: 280 atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaa 339 ||||||||||||||| || ||||| ||||||| |||||| | || |||| |||||||| Sbjct: 2604 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaat 2545 Query: 340 actgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtt 399 || | | | || | |||| |||||| ||||||||||||| |||||||||||| ||||| Sbjct: 2544 accggtcactggcattgttcgctgagcaaaatcaagcagcagctggcgttgctgatcgtt 2485 Query: 400 tgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctggga 459 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 2484 tgtatgaggaaggcttgcacgtagcaactcaactggcatctccctgctggttgctttcga 2425 Query: 460 ggcttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttc 519 | ||||||||||| | ||||||| || || |||||| |||||||||| ||||||||| Sbjct: 2424 gacttcagatccagttacagagcatggtgactgcatgacaaacatctgcttaatactttc 2365 Query: 520 atacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgcca 579 |||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 2364 atacttactgaggcagtattttgtcaggagtccaaagaaagcatcaaatgatgcctgcca 2305 Query: 580 gagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagt 639 ||||| |||||||||| |||||||||| | ||||||| || |||||||| ||||| || Sbjct: 2304 gagagttcggtttgacactgtatagctggctgcagcatggtggtcagtcagcaactcggt 2245 Query: 640 tgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 ||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 2244 cgctcggtccagtactgatttaataataagagaagccccatcacc 2200
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 339 bits (171), Expect = 7e-90 Identities = 291/331 (87%) Strand = Plus / Minus Query: 354 tggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggc 413 |||||| |||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 18810927 tggttcgctgagcaaaatcaagcagcagctggcgttgctgatcatttgtatgagggaggc 18810868 Query: 414 ttgcacgtagcaactcaactggcatctccctgctagttgcctgggaggcttcagatccaa 473 ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||||||| Sbjct: 18810867 ttgcacgtagcaactcaaccggcatctccctgctggttgctttggagacctcagatccaa 18810808 Query: 474 tcacagagcctgatgcctgcatccgaaacatctgcaaaatactttcatacttactgaggc 533 | |||||||||| || |||||| |||||||||| ||||||||||||||| ||||| | Sbjct: 18810807 ttacagagcctggtgactgcatggtaaacatctgcctaatactttcatacttgctgagac 18810748 Query: 534 agtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtttg 593 |||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 18810747 agtattttgtcagaagtccaaagaaagcatcaaatgatgcctgccagagagtccggtttg 18810688 Query: 594 acgaggtatagctggatacagcatgctgatcagtcagtaactcagttgctcggtccagta 653 || |||||||||| | | |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 18810687 acactgtatagctggctgcggcatgctggtcagtcagtaactcagttgctcgatccagta 18810628 Query: 654 ctgacttgatgataagagaagccccgtcacc 684 |||| || || |||||||||||||| ||||| Sbjct: 18810627 ctgatttaataataagagaagccccatcacc 18810597 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| ||||||| ||||||||| ||||| ||||| | ||||| Sbjct: 11292838 catgctgatcagtgagaagctctgttgctctgtccagtacagactttatgatgaaagaag 11292897 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 11292898 ccccatcacc 11292907 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgct 447 ||||||||||||||||| ||||| | ||| ||||||||||| |||||||| Sbjct: 11292642 tttgtgtgaggaaggctggcacgcaacaattcaactggcatttccctgct 11292691 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 532 gcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtt 591 |||||||| ||| || ||||||||||| ||||||||||| || ||||| ||||||| ||| Sbjct: 11209219 gcagtactctgtaagcagcccaaagaaggcatcaaatgatgcttgccatagagctctgtt 11209278 Query: 592 t 592 | Sbjct: 11209279 t 11209279 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| |||||| ||||||||| ||||| ||||| | ||||| Sbjct: 11209302 catgctgatcagtgagaagctctgttgctgtgtccagtacagactttatgatgaaagaag 11209361 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 11209362 ccccatcacc 11209371 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 548 agcccaaagaaagcatcaaatgacgcctgccagagagctcggttt 592 ||||||||||| ||||||||||| || ||||| ||||||| |||| Sbjct: 11292771 agcccaaagaaggcatcaaatgatgcttgccatagagctctgttt 11292815 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgc 446 |||||||| |||||||| ||||| | ||| ||||||||||| ||||||| Sbjct: 11209106 tttgtgtggggaaggctagcacgcaacaattcaactggcatttccctgc 11209154
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 339 bits (171), Expect = 7e-90 Identities = 291/331 (87%) Strand = Plus / Minus Query: 354 tggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggc 413 |||||| |||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 153679 tggttcgctgagcaaaatcaagcagcagctggcgttgctgatcatttgtatgagggaggc 153620 Query: 414 ttgcacgtagcaactcaactggcatctccctgctagttgcctgggaggcttcagatccaa 473 ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||||||| Sbjct: 153619 ttgcacgtagcaactcaaccggcatctccctgctggttgctttggagacctcagatccaa 153560 Query: 474 tcacagagcctgatgcctgcatccgaaacatctgcaaaatactttcatacttactgaggc 533 | |||||||||| || |||||| |||||||||| ||||||||||||||| ||||| | Sbjct: 153559 ttacagagcctggtgactgcatggtaaacatctgcctaatactttcatacttgctgagac 153500 Query: 534 agtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtttg 593 |||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 153499 agtattttgtcagaagtccaaagaaagcatcaaatgatgcctgccagagagtccggtttg 153440 Query: 594 acgaggtatagctggatacagcatgctgatcagtcagtaactcagttgctcggtccagta 653 || |||||||||| | | |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 153439 acactgtatagctggctgcggcatgctggtcagtcagtaactcagttgctcgatccagta 153380 Query: 654 ctgacttgatgataagagaagccccgtcacc 684 |||| || || |||||||||||||| ||||| Sbjct: 153379 ctgatttaataataagagaagccccatcacc 153349
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 339 bits (171), Expect = 7e-90 Identities = 291/331 (87%) Strand = Plus / Minus Query: 354 tggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggc 413 |||||| |||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 56402 tggttcgctgagcaaaatcaagcagcagctggcgttgctgatcatttgtatgagggaggc 56343 Query: 414 ttgcacgtagcaactcaactggcatctccctgctagttgcctgggaggcttcagatccaa 473 ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||||||| Sbjct: 56342 ttgcacgtagcaactcaaccggcatctccctgctggttgctttggagacctcagatccaa 56283 Query: 474 tcacagagcctgatgcctgcatccgaaacatctgcaaaatactttcatacttactgaggc 533 | |||||||||| || |||||| |||||||||| ||||||||||||||| ||||| | Sbjct: 56282 ttacagagcctggtgactgcatggtaaacatctgcctaatactttcatacttgctgagac 56223 Query: 534 agtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtttg 593 |||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 56222 agtattttgtcagaagtccaaagaaagcatcaaatgatgcctgccagagagtccggtttg 56163 Query: 594 acgaggtatagctggatacagcatgctgatcagtcagtaactcagttgctcggtccagta 653 || |||||||||| | | |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 56162 acactgtatagctggctgcggcatgctggtcagtcagtaactcagttgctcgatccagta 56103 Query: 654 ctgacttgatgataagagaagccccgtcacc 684 |||| || || |||||||||||||| ||||| Sbjct: 56102 ctgatttaataataagagaagccccatcacc 56072
>dbj|AK067500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111P10, full insert sequence Length = 3286 Score = 339 bits (171), Expect = 7e-90 Identities = 291/331 (87%) Strand = Plus / Minus Query: 354 tggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggc 413 |||||| |||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 2544 tggttcgctgagcaaaatcaagcagcagctggcgttgctgatcatttgtatgagggaggc 2485 Query: 414 ttgcacgtagcaactcaactggcatctccctgctagttgcctgggaggcttcagatccaa 473 ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||||||| Sbjct: 2484 ttgcacgtagcaactcaaccggcatctccctgctggttgctttggagacctcagatccaa 2425 Query: 474 tcacagagcctgatgcctgcatccgaaacatctgcaaaatactttcatacttactgaggc 533 | |||||||||| || |||||| |||||||||| ||||||||||||||| ||||| | Sbjct: 2424 ttacagagcctggtgactgcatggtaaacatctgcctaatactttcatacttgctgagac 2365 Query: 534 agtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtttg 593 |||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 2364 agtattttgtcagaagtccaaagaaagcatcaaatgatgcctgccagagagtccggtttg 2305 Query: 594 acgaggtatagctggatacagcatgctgatcagtcagtaactcagttgctcggtccagta 653 || |||||||||| | | |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 2304 acactgtatagctggctgcggcatgctggtcagtcagtaactcagttgctcgatccagta 2245 Query: 654 ctgacttgatgataagagaagccccgtcacc 684 |||| || || |||||||||||||| ||||| Sbjct: 2244 ctgatttaataataagagaagccccatcacc 2214
>dbj|AK102498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095B10, full insert sequence Length = 3458 Score = 331 bits (167), Expect = 2e-87 Identities = 290/331 (87%) Strand = Plus / Minus Query: 354 tggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggc 413 |||||| |||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 2535 tggttcgctgagcaaaatcaagcagcagctggcgttgctgatcatttgtatgagggaggc 2476 Query: 414 ttgcacgtagcaactcaactggcatctccctgctagttgcctgggaggcttcagatccaa 473 ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||||||| Sbjct: 2475 ttgcacgtagcaactcaaccggcatctccctgctggttgctttggagacctcagatccaa 2416 Query: 474 tcacagagcctgatgcctgcatccgaaacatctgcaaaatactttcatacttactgaggc 533 | |||||||||| || |||||| |||||||||| ||||||||||||||| ||||| | Sbjct: 2415 ttacagagcctggtgactgcatggtaaacatctgcctaatactttcatacttgctgagac 2356 Query: 534 agtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtttg 593 |||| |||| |||||| |||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 2355 agtattttgccagaagtccaaagaaagcatcaaatgatgcctgccagagagtccggtttg 2296 Query: 594 acgaggtatagctggatacagcatgctgatcagtcagtaactcagttgctcggtccagta 653 || |||||||||| | | |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 2295 acactgtatagctggctgcggcatgctggtcagtcagtaactcagttgctcgatccagta 2236 Query: 654 ctgacttgatgataagagaagccccgtcacc 684 |||| || || |||||||||||||| ||||| Sbjct: 2235 ctgatttaataataagagaagccccatcacc 2205
>gb|AY596604.1| Saccharum officinarum clone SCRLLR1038D03, complete sequence Length = 2630 Score = 236 bits (119), Expect = 8e-59 Identities = 332/403 (82%) Strand = Plus / Minus Query: 282 atcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaaac 341 ||||||||||||| ||||| ||||||||||| ||||| |||||||| | |||||| |||| Sbjct: 1971 atcaaccaggaacagattctgaagtgatgtgcccacctctagcacctgagggattgaaac 1912 Query: 342 tgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttg 401 | | || ||| ||||||||| |||||||| ||| ||||||||||||||| |||| Sbjct: 1911 ctgttactggcatggatctctgagcaaaatcaagaagccgctggcgttgctgctcatttg 1852 Query: 402 tgtgaggaaggcttgcacgtagcaactcaactggcatctccctgctagttgcctgggagg 461 | ||||||||||||||||| || | ||||| ||||| ||| | ||||| || | ||| | Sbjct: 1851 tatgaggaaggcttgcacgaagtagatcaacaggcatttccttactagtagctttggaag 1792 Query: 462 cttcagatccaatcacagagcctgatgcctgcatccgaaacatctgcaaaatactttcat 521 | |||| |||||| | |||| || ||||||||| |||||||||| ||| |||||| Sbjct: 1791 cctcaggtccaattcctgagcttggtgcctgcatgacaaacatctgctgaatgctttcaa 1732 Query: 522 acttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccaga 581 ||||||||| ||||| ||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 1731 acttactgacacagtattttgttagaagcccaaagaaagcatcaaacgatgcctgccaga 1672 Query: 582 gagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagtaactcagttg 641 |||| ||||||| | || ||||||| | ||||||| ||||||||||||||||||||| Sbjct: 1671 gagcacggtttggcacagtgtagctggctgcagcatggcgatcagtcagtaactcagttg 1612 Query: 642 ctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||| ||||||||||| || || | ||||||||||| ||||| Sbjct: 1611 ctcgatccagtactgatttaataactagagaagccccatcacc 1569 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/73 (87%), Gaps = 2/73 (2%) Strand = Plus / Minus Query: 124 tctgaaacctacacttaagtcacagactgaat--aaggctactttcctgagcccatggaa 181 ||||||||||| ||||| |||||| ||||| |||||||||||||||||| |||||| Sbjct: 2161 tctgaaacctaaacttacgtcacaacctgaagtgaaggctactttcctgagcaaatggaa 2102 Query: 182 cttctccaagctc 194 ||||||||||||| Sbjct: 2101 cttctccaagctc 2089 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 gtgctatagtaaatgacccacataa 81 |||||||| |||||||||||||||| Sbjct: 2221 gtgctatattaaatgacccacataa 2197
>gb|AY104141.1| Zea mays PCO097932 mRNA sequence Length = 1519 Score = 176 bits (89), Expect = 6e-41 Identities = 152/173 (87%) Strand = Plus / Minus Query: 512 atactttcatacttactgaggcagtactttgtcagaagcccaaagaaagcatcaaatgac 571 ||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 1183 atactttcaaacttactgacacagtattttgttagaagcccaaagaaagcatcaaatgat 1124 Query: 572 gcctgccagagagctcggtttgacgaggtatagctggatacagcatgctgatcagtcagt 631 |||||||||||||| ||||||| | || ||||||| | ||||||| ||||||||||| Sbjct: 1123 gcctgccagagagcacggtttggcacagtgtagctggctgcagcatggcgatcagtcagt 1064 Query: 632 aactcagttgctcggtccagtactgacttgatgataagagaagccccgtcacc 684 |||||||||||||||||||||||||| || || | |||||||||||| ||||| Sbjct: 1063 aactcagttgctcggtccagtactgatttaataacaagagaagccccatcacc 1011 Score = 105 bits (53), Expect = 2e-19 Identities = 134/161 (83%) Strand = Plus / Minus Query: 282 atcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaaac 341 |||| |||||||| ||||| ||||||||||| ||||| |||||||| | |||||| |||| Sbjct: 1413 atcatccaggaacagattctgaagtgatgtgcccacctctagcacctgagggattgaaac 1354 Query: 342 tgctggcaggtgtggttctctgagcgaaatcaagcagcatctggcgttgctgctcgtttg 401 | | || ||| ||||||||| |||||||| ||| |||||| ||||||||||||| Sbjct: 1353 ctgttactggcatggatctctgagcaaaatcaagaagccgctggcgctgctgctcgtttg 1294 Query: 402 tgtgaggaaggcttgcacgtagcaactcaactggcatctcc 442 | ||||||||||||||||| || | |||||| ||||||||| Sbjct: 1293 tatgaggaaggcttgcacgaagtagctcaacaggcatctcc 1253
>gb|AY108094.1| Zea mays PCO134372 mRNA sequence Length = 832 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 499 aaacatctgcaaaatactttcatacttactgaggcagtactttgtcagaagcccaaagaa 558 |||| |||||| |||||||||||||| ||| |||||||| ||||| || |||||||| Sbjct: 675 aaacctctgcacgatactttcatacttgctgtcacagtacttcgtcagcagtccaaagaa 616 Query: 559 agcatcaaatgacgcctgcca 579 ||||||||||||||| ||||| Sbjct: 615 agcatcaaatgacgcatgcca 595 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 363 gagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggcttgcacgta 422 |||| ||||| ||||| |||| || |||||||| || || |||||||| || ||||||| Sbjct: 811 gagcaaaatctagcagtgtctgacgatgctgctcattagtatgaggaagactcgcacgta 752 Query: 423 gcaactcaactggcatctccctgct 447 || |||||| |||||||||||||| Sbjct: 751 acagctcaacgggcatctccctgct 727
>ref|XM_465073.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3396 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgct 447 ||||||||||||||||| ||||| | ||| ||||||||||| |||||||| Sbjct: 2571 tttgtgtgaggaaggctggcacgcaacaattcaactggcatttccctgct 2522 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| ||||||| ||||||||| ||||| ||||| | ||||| Sbjct: 2375 catgctgatcagtgagaagctctgttgctctgtccagtacagactttatgatgaaagaag 2316 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 2315 ccccatcacc 2306 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 548 agcccaaagaaagcatcaaatgacgcctgccagagagctcggttt 592 ||||||||||| ||||||||||| || ||||| ||||||| |||| Sbjct: 2442 agcccaaagaaggcatcaaatgatgcttgccatagagctctgttt 2398
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| ||||||| ||||||||| ||||| ||||| | ||||| Sbjct: 95653 catgctgatcagtgagaagctctgttgctctgtccagtacagactttatgatgaaagaag 95712 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 95713 ccccatcacc 95722 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgct 447 ||||||||||||||||| ||||| | ||| ||||||||||| |||||||| Sbjct: 95457 tttgtgtgaggaaggctggcacgcaacaattcaactggcatttccctgct 95506 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 532 gcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtt 591 |||||||| ||| || ||||||||||| ||||||||||| || ||||| ||||||| ||| Sbjct: 12034 gcagtactctgtaagcagcccaaagaaggcatcaaatgatgcttgccatagagctctgtt 12093 Query: 592 t 592 | Sbjct: 12094 t 12094 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| |||||| ||||||||| ||||| ||||| | ||||| Sbjct: 12117 catgctgatcagtgagaagctctgttgctgtgtccagtacagactttatgatgaaagaag 12176 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 12177 ccccatcacc 12186 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 548 agcccaaagaaagcatcaaatgacgcctgccagagagctcggttt 592 ||||||||||| ||||||||||| || ||||| ||||||| |||| Sbjct: 95586 agcccaaagaaggcatcaaatgatgcttgccatagagctctgttt 95630 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgc 446 |||||||| |||||||| ||||| | ||| ||||||||||| ||||||| Sbjct: 11921 tttgtgtggggaaggctagcacgcaacaattcaactggcatttccctgc 11969
>dbj|AK102545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096N20, full insert sequence Length = 1187 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgct 447 ||||||||||||||||| ||||| | ||| ||||||||||| |||||||| Sbjct: 500 tttgtgtgaggaaggctggcacgcaacaattcaactggcatttccctgct 451 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| ||||||| ||||||||| ||||| ||||| | ||||| Sbjct: 304 catgctgatcagtgagaagctctgttgctctgtccagtacagactttatgatgaaagaag 245 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 244 ccccatcacc 235 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 548 agcccaaagaaagcatcaaatgacgcctgccagagagctcggttt 592 ||||||||||| ||||||||||| || ||||| ||||||| |||| Sbjct: 371 agcccaaagaaggcatcaaatgatgcttgccatagagctctgttt 327
>dbj|AK070497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B07, full insert sequence Length = 3396 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgct 447 ||||||||||||||||| ||||| | ||| ||||||||||| |||||||| Sbjct: 2571 tttgtgtgaggaaggctggcacgcaacaattcaactggcatttccctgct 2522 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| ||||||| ||||||||| ||||| ||||| | ||||| Sbjct: 2375 catgctgatcagtgagaagctctgttgctctgtccagtacagactttatgatgaaagaag 2316 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 2315 ccccatcacc 2306 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 548 agcccaaagaaagcatcaaatgacgcctgccagagagctcggttt 592 ||||||||||| ||||||||||| || ||||| ||||||| |||| Sbjct: 2442 agcccaaagaaggcatcaaatgatgcttgccatagagctctgttt 2398
>ref|XM_465063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2809 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 532 gcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtt 591 |||||||| ||| || ||||||||||| ||||||||||| || ||||| ||||||| ||| Sbjct: 1822 gcagtactctgtaagcagcccaaagaaggcatcaaatgatgcttgccatagagctctgtt 1763 Query: 592 t 592 | Sbjct: 1762 t 1762 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| |||||| ||||||||| ||||| ||||| | ||||| Sbjct: 1739 catgctgatcagtgagaagctctgttgctgtgtccagtacagactttatgatgaaagaag 1680 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 1679 ccccatcacc 1670 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgc 446 |||||||| |||||||| ||||| | ||| ||||||||||| ||||||| Sbjct: 1935 tttgtgtggggaaggctagcacgcaacaattcaactggcatttccctgc 1887
>gb|BT017823.1| Zea mays clone EL01N0508B10.c mRNA sequence Length = 1099 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 363 gagcgaaatcaagcagcatctggcgttgctgctcgtttgtgtgaggaaggcttgcacgta 422 |||| ||||| ||||| |||| || |||||||| || || |||||||| || ||||||| Sbjct: 169 gagcaaaatctagcagtgtctgacgatgctgctcattagtatgaggaagactcgcacgta 110 Query: 423 gcaactcaactggcatctccctgct 447 || |||||| |||||||||||||| Sbjct: 109 acagctcaacgggcatctccctgct 85 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 168 ctgagcccatggaacttctccaagctcaca 197 ||||||| |||||||||||||||||||||| Sbjct: 331 ctgagccaatggaacttctccaagctcaca 302
>dbj|AK069078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B22, full insert sequence Length = 2809 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 532 gcagtactttgtcagaagcccaaagaaagcatcaaatgacgcctgccagagagctcggtt 591 |||||||| ||| || ||||||||||| ||||||||||| || ||||| ||||||| ||| Sbjct: 1822 gcagtactctgtaagcagcccaaagaaggcatcaaatgatgcttgccatagagctctgtt 1763 Query: 592 t 592 | Sbjct: 1762 t 1762 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 615 catgctgatcagtcagtaactcagttgctcggtccagtactgacttgatgataagagaag 674 ||||||||||||| || | ||| |||||| ||||||||| ||||| ||||| | ||||| Sbjct: 1739 catgctgatcagtgagaagctctgttgctgtgtccagtacagactttatgatgaaagaag 1680 Query: 675 ccccgtcacc 684 |||| ||||| Sbjct: 1679 ccccatcacc 1670 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 398 tttgtgtgaggaaggcttgcacgtagcaactcaactggcatctccctgc 446 |||||||| |||||||| ||||| | ||| ||||||||||| ||||||| Sbjct: 1935 tttgtgtggggaaggctagcacgcaacaattcaactggcatttccctgc 1887
>gb|AY107916.1| Zea mays PCO138780 mRNA sequence Length = 465 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 168 ctgagcccatggaacttctccaagctcaca 197 ||||||| |||||||||||||||||||||| Sbjct: 214 ctgagccaatggaacttctccaagctcaca 185
>emb|CT486006.6| Mouse DNA sequence from clone RP23-433C10 on chromosome 9, complete sequence Length = 208668 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 501 acatctgcaaaatactttcatactta 526 |||||||||||||| ||||||||||| Sbjct: 96899 acatctgcaaaatattttcatactta 96874
>gb|AC140360.4| Mus musculus BAC clone RP24-241G4 from chromosome 12, complete sequence Length = 181901 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tccaatcacagagcctgatgcc 490 |||||||||||||||||||||| Sbjct: 137906 tccaatcacagagcctgatgcc 137927
>ref|XM_473391.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 572 gcctgccagagagctcggttt 592 ||||||||||||||||||||| Sbjct: 1166 gcctgccagagagctcggttt 1186
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 gcctgccagagagctcggttt 592 ||||||||||||||||||||| Sbjct: 28458 gcctgccagagagctcggttt 28438
>emb|AL662928.4| Human DNA sequence from clone RP11-92H11 on chromosome 1, complete sequence Length = 88568 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggggatccgtctctttttgtt 106 ||||||||||||||||||||| Sbjct: 70901 ggggatccgtctctttttgtt 70921
>ref|NM_076622.3| Caenorhabditis elegans C15H9.7 (kynureninase) mRNA, complete cds Length = 1518 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tgagcccatggaacttctcca 189 ||||||||||||||||||||| Sbjct: 374 tgagcccatggaacttctcca 354
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 gcctgccagagagctcggttt 592 ||||||||||||||||||||| Sbjct: 27292530 gcctgccagagagctcggttt 27292510
>gb|AF303267.1|AF303267 Caenorhabditis elegans kynureninase (XG726) mRNA, complete cds Length = 1518 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tgagcccatggaacttctcca 189 ||||||||||||||||||||| Sbjct: 374 tgagcccatggaacttctcca 354
>gb|U56965.1| Caenorhabditis elegans cosmid C15H9, complete sequence Length = 41752 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tgagcccatggaacttctcca 189 ||||||||||||||||||||| Sbjct: 19485 tgagcccatggaacttctcca 19505
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 gcctgccagagagctcggttt 592 ||||||||||||||||||||| Sbjct: 123619 gcctgccagagagctcggttt 123599
>gb|AC159888.2| Mus musculus BAC clone RP24-133O9 from chromosome 12, complete sequence Length = 181236 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tcagaagcccaaagaaagca 562 |||||||||||||||||||| Sbjct: 152479 tcagaagcccaaagaaagca 152498
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tgatcagtcagtaactcagt 639 |||||||||||||||||||| Sbjct: 3679173 tgatcagtcagtaactcagt 3679154
>gb|AC124739.2| Mus musculus BAC clone RP23-344H4 from chromosome 12, complete sequence Length = 224632 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggaacttctccaagctcaca 197 |||||||||||||||||||| Sbjct: 81366 ggaacttctccaagctcaca 81385
>gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, complete sequence Length = 168418 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 taatctgaaacctacacttaagtcacag 148 ||||||||||||| ||||||| |||||| Sbjct: 19131 taatctgaaaccttcacttaaatcacag 19158
>gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosome 8, complete sequence Length = 162027 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gaaacatctgcaaaatactt 517 |||||||||||||||||||| Sbjct: 33967 gaaacatctgcaaaatactt 33986
>ref|XM_763879.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_61_1957_21219) partial mRNA Length = 19263 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 gatacagcatgctgatcagt 627 |||||||||||||||||||| Sbjct: 17417 gatacagcatgctgatcagt 17436
>ref|XM_738076.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000661.00.0) partial mRNA Length = 1788 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tctttttgttggtctataat 116 |||||||||||||||||||| Sbjct: 1143 tctttttgttggtctataat 1124
>gb|AC166936.1| Mus musculus BAC clone RP24-244M17 from chromosome 12, complete sequence Length = 167608 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 aggcttcagatccaatcacagagc 482 |||||||||||||||||| ||||| Sbjct: 8520 aggcttcagatccaatcatagagc 8497
>emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on chromosome 1 Contains part of the gene for C-terminal PDZ domain ligand of neuronal nitric oxide synthase (CAPON), complete sequence Length = 208408 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 acatctgcaaaatactttca 520 |||||||||||||||||||| Sbjct: 8145 acatctgcaaaatactttca 8164
>emb|X99688.1|HSTYL H.sapiens mRNA from TYL gene Length = 4307 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccagggggattaaaactgct 345 |||||||||||||||||||| Sbjct: 4277 ccagggggattaaaactgct 4296
>gb|AC154318.3| Mus musculus BAC clone RP23-316D19 from chromosome 12, complete sequence Length = 176391 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 aggcttcagatccaatcacagagc 482 |||||||||||||||||| ||||| Sbjct: 109046 aggcttcagatccaatcatagagc 109023
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tgatcagtcagtaactcagt 639 |||||||||||||||||||| Sbjct: 102204 tgatcagtcagtaactcagt 102223
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggaacttctccaagctcaca 197 |||||||||||||||||||| Sbjct: 14586 ggaacttctccaagctcaca 14567
>dbj|AK083827.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130017D19 product:similar to ZINC FINGER PROTEIN 125 (FRAGMENT) [Mus musculus], full insert sequence Length = 3639 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggaacttctccaagctcaca 197 |||||||||||||||||||| Sbjct: 532 ggaacttctccaagctcaca 551
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tgatcagtcagtaactcagt 639 |||||||||||||||||||| Sbjct: 3679284 tgatcagtcagtaactcagt 3679265
>gb|AC154733.2| Mus musculus BAC clone RP24-380I6 from chromosome 13, complete sequence Length = 209751 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gcatcaaatgacgcctgcca 579 |||||||||||||||||||| Sbjct: 119633 gcatcaaatgacgcctgcca 119652
>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence Length = 167125 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 aggcttcagatccaatcacagagc 482 |||||||||||||||||| ||||| Sbjct: 1079 aggcttcagatccaatcatagagc 1102
>emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chromosome 12, complete sequence Length = 90243 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggaacttctccaagctcaca 197 |||||||||||||||||||| Sbjct: 73664 ggaacttctccaagctcaca 73683
>gb|AC158366.5| Mus musculus BAC clone RP23-33N12 from chromosome 12, complete sequence Length = 212215 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggaacttctccaagctcaca 197 |||||||||||||||||||| Sbjct: 97646 ggaacttctccaagctcaca 97665
>emb|AJ555625.1|PBE555625 Plasmodium berghei mRNA for metacaspase 1 (mc1 gene) Length = 1782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tctttttgttggtctataat 116 |||||||||||||||||||| Sbjct: 1146 tctttttgttggtctataat 1127 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,212,931 Number of Sequences: 3902068 Number of extensions: 5212931 Number of successful extensions: 90744 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90456 Number of HSP's gapped (non-prelim): 285 length of query: 684 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 661 effective length of database: 17,143,297,704 effective search space: 11331719782344 effective search space used: 11331719782344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)