ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal20c19 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 238 bits (608), Expect = 6e-63 Identities = 110/127 (86%), Positives = 119/127 (93%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 +YVDVKVNGA+HKGMPHKFYHGRTGR+WNVTK A+GVE+NKQ+GNRIIRKRIHVRVEHVQ Sbjct: 38 DYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQ 97 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIPYDVV 169 SRCAEEF+LRK KND+LKA AKA GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVV Sbjct: 98 QSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVV 157 Query: 168 NDLKGGY 148 NDLKGGY Sbjct: 158 NDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 132 bits (333), Expect = 5e-31 Identities = 70/121 (57%), Positives = 88/121 (72%), Gaps = 3/121 (2%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 EYVDV N AVHKGMP K+YHGRTG VWNVTK AIGVEINK+V +RII+KRIHVR++HV+ Sbjct: 38 EYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVK 97 Query: 348 PSRCAEEFRLRKVKNDQLKAEAK-ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPY 178 S C + F R +ND++K +A A+ V STKR P+ PK G ++ +G ET IPY Sbjct: 98 KSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPY 157 Query: 177 D 175 + Sbjct: 158 E 158
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 129 bits (323), Expect = 7e-30 Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVEH++ Sbjct: 38 DIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIK 97 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 175 S+C +EF R N +AEAKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 98 HSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 129 bits (323), Expect = 7e-30 Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVEH++ Sbjct: 38 DIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIK 97 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 175 S+C +EF R N +AEAKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 98 HSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 123 bits (308), Expect = 4e-28 Identities = 59/120 (49%), Positives = 81/120 (67%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K G V KGMPHK YHG+TGRV+NVT+HA+G+ +NKQV +I+ KRI+VR+EH++ Sbjct: 37 DIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIK 96 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 175 S+ + F R +NDQ K EAK +G + KRQP P+ V G E + PIPY+ Sbjct: 97 HSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 123 bits (308), Expect = 4e-28 Identities = 59/120 (49%), Positives = 81/120 (67%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K G V KGMPHK YHG+TGRV+NVT+HA+G+ +NKQV +I+ KRI+VR+EH++ Sbjct: 37 DIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIK 96 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 175 S+ + F R +NDQ K EAK +G + KRQP P+ V G E + PIPY+ Sbjct: 97 HSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 122 bits (305), Expect = 8e-28 Identities = 59/120 (49%), Positives = 82/120 (68%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ Sbjct: 38 DIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVK 97 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 175 S+C ++F R N+ + EAKA+G+ + +RQP P V E VT P+ YD Sbjct: 98 HSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 122 bits (305), Expect = 8e-28 Identities = 59/120 (49%), Positives = 82/120 (68%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ Sbjct: 38 DIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVK 97 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 175 S+C ++F R N+ + EAKA+G+ + +RQP P V E VT P+ YD Sbjct: 98 HSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 118 bits (295), Expect = 1e-26 Identities = 57/120 (47%), Positives = 79/120 (65%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K G V KGMPHK YHG+TGRV+NVT+HA+G+ +NKQV +I+ KRI+VR+EH++ Sbjct: 37 DIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIK 96 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 175 S+ + F R +NDQ K EAK +G + QP P+ V G E + PIPY+ Sbjct: 97 HSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 117 bits (294), Expect = 2e-26 Identities = 57/120 (47%), Positives = 79/120 (65%), Gaps = 2/120 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K G V KGMPHK YHG+TGRV+NVT+HA+G+ +NKQV +I+ KRI+VR+EH++ Sbjct: 37 DIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIK 96 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 175 S+ + F R +NDQ K EAK +G + KR P+ V G E + PIPY+ Sbjct: 97 HSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 110 bits (276), Expect = 2e-24 Identities = 54/119 (45%), Positives = 81/119 (68%), Gaps = 1/119 (0%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K +G+V K PHK YHG+TGR++NVT+HA+G+ +NKQV RII KRI+VR+EH++ Sbjct: 36 DIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIK 95 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTT-IETVTPIPYD 175 S+ F R +N++ + EA+ + ++ KRQP P+ G V + E V PIPY+ Sbjct: 96 HSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 109 bits (273), Expect = 4e-24 Identities = 52/123 (42%), Positives = 82/123 (66%), Gaps = 3/123 (2%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++ Sbjct: 37 DLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIK 96 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGE-VISTKRQPLGPKPGFMV--EGTTIETVTPIPY 178 PS+C +F R ND+ + AK+ G+ V + KR P+ P+ V + E + P+ + Sbjct: 97 PSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRF 156 Query: 177 DVV 169 ++V Sbjct: 157 EIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 106 bits (265), Expect = 3e-23 Identities = 53/127 (41%), Positives = 80/127 (62%), Gaps = 9/127 (7%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 +YV + N ++ G+P+K +HG+TGRVWNV HAIGV +NK+V NRI+ KR+H+ EH++ Sbjct: 38 DYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIR 97 Query: 348 PSRCAEEFRLRKV-------KNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIE--T 196 PS C ++F RK +N QLK E K + KR P P+P +++G I+ T Sbjct: 98 PSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTT 156 Query: 195 VTPIPYD 175 V P+ ++ Sbjct: 157 VAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 90.9 bits (224), Expect = 2e-18 Identities = 44/100 (44%), Positives = 72/100 (72%), Gaps = 1/100 (1%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + VD+ VN A+ KGMPHK+YHGRTGRV++V ++ V + K+V + + K+I VR+EHV+ Sbjct: 37 DMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVR 96 Query: 348 PSRCAEEFRLRKVKNDQLKAEAKARGEVIS-TKRQPLGPK 232 SRC+EE + R + ++ +A++RG V++ +KR+ GP+ Sbjct: 97 KSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/61 (42%), Positives = 38/61 (62%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 EYV VK+N ++HKGMPH+ YHG+ G V V K E+ +G++ + + VR EH+ Sbjct: 40 EYVVVKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHLI 95 Query: 348 P 346 P Sbjct: 96 P 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/59 (40%), Positives = 36/59 (61%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHV 352 +YV +K+N +VHKGMPH+ YHG+ G + A V + +G++ K I VR EH+ Sbjct: 40 DYVVIKINPSVHKGMPHRRYHGKVGVIQGKRGKAYIVRVT--LGDK--EKVIIVRPEHL 94
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQPS 343 V + ++ +VHKGMPH YHGRTG V A V+I G + K++ V EH++P Sbjct: 41 VHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQ 96 Query: 342 RCAE 331 E Sbjct: 97 EQPE 100
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 41.2 bits (95), Expect = 0.002 Identities = 22/59 (37%), Positives = 36/59 (61%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQP 346 V VK+N +VH+GMPH+ Y G+ G++ + K ++ +G++ K I VR EH+ P Sbjct: 42 VVVKINPSVHQGMPHRRYQGKVGKI--IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 EYV + ++ +VHKGMPH +HGRTG V V K + + G + K+I +H++ Sbjct: 39 EYVHIVIDPSVHKGMPHPRFHGRTGIV--VGKQGRAFIVKVRDGGKY--KQIIAYPQHLR 94 Query: 348 PS 343 P+ Sbjct: 95 PA 96
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 38.9 bits (89), Expect = 0.009 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTG 454 + VD+K G V KG+PHK YHG+TG Sbjct: 37 DIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 38.5 bits (88), Expect = 0.012 Identities = 20/60 (33%), Positives = 36/60 (60%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + V + ++ ++H+G PH +HG+TGRV + + V + GN+ K++ VR EH+Q Sbjct: 38 DLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 35.4 bits (80), Expect = 0.098 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQPS 343 V + + + HKGMP +HGRTG V A VE+ GN++ K + + H++P Sbjct: 41 VHIVIEPSYHKGMPDPRFHGRTGTVVGKRGDAYIVEVPD--GNKV--KTLFIHPVHLRPQ 96 Query: 342 R 340 + Sbjct: 97 K 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 35.4 bits (80), Expect = 0.098 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQPS 343 V + + + HKGMP +HGRTG V A VE+ GN++ K + + H++P Sbjct: 41 VHIVIEPSYHKGMPDPRFHGRTGTVVGKRGDAYIVEVPD--GNKV--KTLFIHPVHLRPQ 96 Query: 342 R 340 + Sbjct: 97 K 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 35.0 bits (79), Expect = 0.13 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQPS 343 V + + + HKGMP +HGRTG V A VEI G+++ K + + H++P Sbjct: 41 VHIVIEPSYHKGMPDPRFHGRTGTVVGKRGEAYIVEIKD--GSKV--KTLFIHPVHLRPQ 96 Query: 342 R 340 + Sbjct: 97 K 97
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 33.9 bits (76), Expect = 0.29 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = -3 Query: 489 GMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 322 GMPH+ +HG TG V V K E+ +G + RK + V H++P A E R Sbjct: 54 GMPHRRFHGLTGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 33.5 bits (75), Expect = 0.37 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQP 346 V + + A KGMPH + GRTG V A V++ G ++ K + VR EH++P Sbjct: 40 VHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 32.3 bits (72), Expect = 0.83 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = -3 Query: 522 VDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQPS 343 V + + + HKGMP +HGRTG V A V+I G ++ K + H++P Sbjct: 41 VHIVIEPSYHKGMPDPRFHGRTGTVVGKRGDAYIVQITD--GGKV--KTFFIHPVHLRPQ 96 Query: 342 R 340 + Sbjct: 97 K 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 32.3 bits (72), Expect = 0.83 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + V V ++ +V KGMPH +HG+TG V V + + + G + K I R +H++ Sbjct: 38 DLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLR 93 Query: 348 PSR 340 S+ Sbjct: 94 ESK 96
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 32.0 bits (71), Expect = 1.1 Identities = 32/141 (22%), Positives = 56/141 (39%) Frame = -1 Query: 530 ASTSTSR*TAPCTRVCRTSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLSMC 351 ++TS+S ++P + +++TT +P + ++SS S S S Sbjct: 134 STTSSSSSSSPSSS---STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 190 Query: 350 SHPGVLRSSA*GK*RMTSSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMW 171 S SS SS V +S+ SHS+ + S S SRPS + Sbjct: 191 SSSSSSSSS--------SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFIT 242 Query: 170 SMISRVVTRVFGLSACTTSSN 108 +M S ++ ++SS+ Sbjct: 243 TMSSSTFISTVTVTPSSSSSS 263
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 1.9 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -3 Query: 396 NRIIRKRIHVRVEHVQPSRCAEEFRLR 316 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>DNAK_PICTO (Q6L0S7) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 613 Score = 30.4 bits (67), Expect = 3.2 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%) Frame = +1 Query: 196 GLDCGTLDHEPGFRAEWLPLGADDLTTCL--------GFRLELVILHFPQA--ELLSTPG 345 GL+ + +EP A L G D L L G L++ I+ F Q ++LST G Sbjct: 142 GLNVRRIINEP--TAACLAYGIDKLNQTLKIVIYDLGGGTLDVTIMDFGQGVFQVLSTSG 199 Query: 346 WLHMLNTDMDPFPDDAVSNLLVD 414 H+ TDM D+A+ N L D Sbjct: 200 DTHLGGTDM----DEAIVNFLAD 218
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 257 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 150 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 5.4 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 360 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 181 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 180 YDVVNDLKGGY 148 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 5.4 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 360 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 181 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 180 YDVVNDLKGGY 148 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 5.4 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 360 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 181 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 180 YDVVNDLKGGY 148 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 29.3 bits (64), Expect = 7.1 Identities = 16/63 (25%), Positives = 33/63 (52%) Frame = -3 Query: 528 EYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKHAIGVEINKQVGNRIIRKRIHVRVEHVQ 349 + V + ++ +V KGMP+ + G TG+V + +E+ GN + K + +H++ Sbjct: 38 QMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHLK 93 Query: 348 PSR 340 P + Sbjct: 94 PQK 96
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.3 bits (64), Expect = 7.1 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 360 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 181 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 180 YDVVNDLKGGY 148 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 7.1 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 287 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 412 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211
>HN_PI3HX (P12566) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.9 bits (63), Expect = 9.2 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 360 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 181 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRIIHDVGIKPLNPDDFWRCTSGLPSLMRTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 180 YDVVNDLKGGY 148 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HT (P12562) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.9 bits (63), Expect = 9.2 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 360 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 181 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCIRTP 194 Query: 180 YDVVNDLKGGY 148 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>ZN691_HUMAN (Q5VV52) Zinc finger protein 691| Length = 312 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 396 NRIIRKRIHVRVEHVQPSRCAEEFRLR 316 NRI +RIH+ +H + +C E FR R Sbjct: 157 NRIRHERIHLEEKHYKCPKCQESFRRR 183
>UB2G2_PONPY (Q5RF84) Ubiquitin-conjugating enzyme E2 G2 (EC 6.3.2.19)| (Ubiquitin-protein ligase G2) (Ubiquitin carrier protein G2) Length = 165 Score = 28.9 bits (63), Expect = 9.2 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Frame = +1 Query: 184 NGSDGLDCGTLDHEPGFRAEWLPLGADDLTTCLGFRLELVILHFPQAELLSTPGW---LH 354 N +G+ G ++ E F E L +G +D TC F + IL FP LS P Sbjct: 19 NPPEGIVAGPMNEENFFEWEALIMGPED--TCFEFGVFPAILSFPLDYPLSPPKMRFTCE 76 Query: 355 MLNTDMDPFPDDAVSNLLVDLDADGMLGDVPHASGAAVVELVRHTLV 495 M + ++ +PD V ++ D +G A + V+ V L+ Sbjct: 77 MFHPNI--YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILL 121
>UB2G2_MOUSE (P60605) Ubiquitin-conjugating enzyme E2 G2 (EC 6.3.2.19)| (Ubiquitin-protein ligase G2) (Ubiquitin carrier protein G2) Length = 165 Score = 28.9 bits (63), Expect = 9.2 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Frame = +1 Query: 184 NGSDGLDCGTLDHEPGFRAEWLPLGADDLTTCLGFRLELVILHFPQAELLSTPGW---LH 354 N +G+ G ++ E F E L +G +D TC F + IL FP LS P Sbjct: 19 NPPEGIVAGPMNEENFFEWEALIMGPED--TCFEFGVFPAILSFPLDYPLSPPKMRFTCE 76 Query: 355 MLNTDMDPFPDDAVSNLLVDLDADGMLGDVPHASGAAVVELVRHTLV 495 M + ++ +PD V ++ D +G A + V+ V L+ Sbjct: 77 MFHPNI--YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILL 121
>UB2G2_HUMAN (P60604) Ubiquitin-conjugating enzyme E2 G2 (EC 6.3.2.19)| (Ubiquitin-protein ligase G2) (Ubiquitin carrier protein G2) Length = 165 Score = 28.9 bits (63), Expect = 9.2 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Frame = +1 Query: 184 NGSDGLDCGTLDHEPGFRAEWLPLGADDLTTCLGFRLELVILHFPQAELLSTPGW---LH 354 N +G+ G ++ E F E L +G +D TC F + IL FP LS P Sbjct: 19 NPPEGIVAGPMNEENFFEWEALIMGPED--TCFEFGVFPAILSFPLDYPLSPPKMRFTCE 76 Query: 355 MLNTDMDPFPDDAVSNLLVDLDADGMLGDVPHASGAAVVELVRHTLV 495 M + ++ +PD V ++ D +G A + V+ V L+ Sbjct: 77 MFHPNI--YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILL 121
>TF3C1_HUMAN (Q12789) General transcription factor 3C polypeptide 1 (Transcription| factor IIIC-alpha subunit) (TF3C-alpha) (TFIIIC 220 kDa subunit) (TFIIIC220) (TFIIIC box B-binding subunit) Length = 2109 Score = 28.9 bits (63), Expect = 9.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +1 Query: 28 PNIFLT*IRPNPDYCSESKSYS*EQHRFELVVQADNPNTLVTTLEIIDHIIRNGSDGLD 204 P+ F I P + CS E+ +L + +P L LEI++ II G G+D Sbjct: 1706 PDTFTKLINPQENTCSL------EEFVLQLELSGYSPEDLTAALEILEAIIATGCFGID 1758 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,153,298 Number of Sequences: 219361 Number of extensions: 1772753 Number of successful extensions: 5417 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5417 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
