ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20c14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X51608.1|TAPRKGEN Triticum aestivum RNA for phosphoribulokinase 668 0.0
2emb|X57952.1|TAPRK T.aestivum PRK gene for ribulose-5-phosphate ... 668 0.0
3ref|XM_467296.1| Oryza sativa (japonica cultivar-group), mRNA 270 3e-69
4ref|XM_507520.1| PREDICTED Oryza sativa (japonica cultivar-group... 270 3e-69
5ref|XM_506922.2| PREDICTED Oryza sativa (japonica cultivar-group... 270 3e-69
6gb|AF543191.1| Oryza sativa (indica cultivar-group) phosphoribul... 270 3e-69
7gb|AF529237.2| Oryza sativa (indica cultivar-group) phosphoribul... 270 3e-69
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 270 3e-69
9dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 270 3e-69
10dbj|AK119485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
11dbj|AK099461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
12dbj|AK066164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
13dbj|AK104857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 8e-67
14gb|AY106347.1| Zea mays PCO092382 mRNA sequence 188 9e-45
15dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone... 82 2e-12
16ref|NM_102940.3| Arabidopsis thaliana ATP binding / kinase/ phos... 72 2e-09
17gb|BT000019.1| Arabidopsis thaliana phosphoribulokinase precurso... 72 2e-09
18gb|AY128355.1| Arabidopsis thaliana phosphoribulokinase precurso... 72 2e-09
19emb|X58149.1|ATPRK A.thaliana PRKase gene for Ribulose-5-phospha... 72 2e-09
20gb|AY044335.1| Arabidopsis thaliana Unknown protein (T12O21.4) m... 72 2e-09
21gb|AC074309.4|AC074309 Arabidopsis thaliana chromosome 1 BAC T12... 72 2e-09
22gb|AY084576.1| Arabidopsis thaliana clone 11226 mRNA, complete s... 72 2e-09
23gb|AY961946.1| Picea abies phosphoribulokinase mRNA, partial cds 54 4e-04
24emb|X07654.1|SOPRK Spinach mRNA for phosphoribulokinase (EC 2.7.... 52 0.001
25gb|M21338.1|SPIPRK Spinach phosphoribulokinase (PRK) mRNA, 3' end 52 0.001
26gb|M73707.1|CIPPRK Mesembryanthemum crystallinum phosphoribuloki... 52 0.001
27emb|X61749.1|SMTBPA S.mytilis telomere-binding protein gene (alp... 46 0.086
28gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, com... 46 0.086
29gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, com... 46 0.086
30emb|Y11248.1|PSPHOBKIN P.sativum mRNA for phosphoribulokinase, p... 46 0.086
31gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, compl... 44 0.34
32emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chr... 44 0.34
33gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 42 1.3
34gb|AC024106.14| Homo sapiens 3 BAC RP11-33K7 (Roswell Park Cance... 42 1.3
35gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 42 1.3
36gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's H... 40 5.3
37gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, co... 40 5.3
38gb|AC158582.2| Mus musculus chromosome 7, clone RP24-173K12, com... 40 5.3
39gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosom... 40 5.3
40emb|AJ245511.1|MTR245511 Medicago truncatula partial mRNA for ub... 40 5.3
41gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome... 40 5.3
42gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Canc... 40 5.3
43emb|BX908397.7| Zebrafish DNA sequence from clone CH211-103F16 i... 40 5.3
44gb|AF067832.1|AF067832 Stylonychia mytilus micronuclear alpha te... 40 5.3
45gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, com... 40 5.3 
>emb|X51608.1|TAPRKGEN Triticum aestivum RNA for phosphoribulokinase
          Length = 1533

 Score =  668 bits (337), Expect = 0.0
 Identities = 382/398 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgggagaagatgtacattgaaatgtgttaagaggagacataagagactctcatcatgga 60
            |||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 1503 atgggagaagatgtacatcgaaatttgttaagaagagacataagagaccctcatcatgga 1444

                                                                        
Query: 61   gaggattttcgagaagttcaaaatgcaggttttcatgagttctgcagtgaactttctacc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 gaggattttcgagaagttcaaaatgcaggttttcatgagttctgcagtgaactttctacc 1384

                                                                        
Query: 121  gtcttctagctgtaatatattcaaactagtcacaagaaacgtgaggatgctcattctcat 180
            |||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||
Sbjct: 1383 gtcttctagctgtaatatattcaaactaggtacaagaaatgcgaggatgctcattctcat 1324

                                                                        
Query: 181  tgagttggtgatgaaatgattcatgaacttgaatttggggctcatcaaacttttgctgct 240
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1323 tgagttggtgatgaaatgattcgtgaacttgaatttggggctcatcaaacttttgctgct 1264

                                                                        
Query: 241  tcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatcttcagt 300
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1263 tcagcaggaacgccggccctctcagcgatgatctgttcatagagatctctaatcttcagt 1204

                                                                        
Query: 301  cctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgcatgcttt 360
            ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 cctacaatggtctggaagagacctgttccattgttgctgcctgggaagtctgcatgcttt 1144

                                                  
Query: 361  agcatttgctgtgtcacctncccntagaacttgnttga 398
            ||||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1143 agcatttgctgtgtcacctccccgtagaacttggttga 1106
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>emb|X57952.1|TAPRK T.aestivum PRK gene for ribulose-5-phosphate kinase
          Length = 2501

 Score =  668 bits (337), Expect = 0.0
 Identities = 382/398 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgggagaagatgtacattgaaatgtgttaagaggagacataagagactctcatcatgga 60
            |||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 2335 atgggagaagatgtacatcgaaatttgttaagaagagacataagagaccctcatcatgga 2276

                                                                        
Query: 61   gaggattttcgagaagttcaaaatgcaggttttcatgagttctgcagtgaactttctacc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2275 gaggattttcgagaagttcaaaatgcaggttttcatgagttctgcagtgaactttctacc 2216

                                                                        
Query: 121  gtcttctagctgtaatatattcaaactagtcacaagaaacgtgaggatgctcattctcat 180
            |||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||
Sbjct: 2215 gtcttctagctgtaatatattcaaactaggtacaagaaatgcgaggatgctcattctcat 2156

                                                                        
Query: 181  tgagttggtgatgaaatgattcatgaacttgaatttggggctcatcaaacttttgctgct 240
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2155 tgagttggtgatgaaatgattcgtgaacttgaatttggggctcatcaaacttttgctgct 2096

                                                                        
Query: 241  tcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatcttcagt 300
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2095 tcagcaggaacgccggccctctcagcgatgatctgttcatagagatctctaatcttcagt 2036

                                                                        
Query: 301  cctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgcatgcttt 360
            ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 cctacaatggtctggaagagacctgttccattgttgctgcctgggaagtctgcatgcttt 1976

                                                  
Query: 361  agcatttgctgtgtcacctncccntagaacttgnttga 398
            ||||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1975 agcatttgctgtgtcacctccccgtagaacttggttga 1938
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>ref|XM_467296.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1494

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 1341 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 1282

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1281 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1222

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1221 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1162

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1161 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1102

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1101 tgctttagcatttgctgtgtcacct 1077



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1454 agaagatgtacattgaaatgtgtcaagaagaga 1422
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>ref|XM_507520.1| PREDICTED Oryza sativa (japonica cultivar-group), P0459B01.11 mRNA
          Length = 1556

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 1383 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 1324

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1323 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1264

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1263 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1204

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1203 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1144

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1143 tgctttagcatttgctgtgtcacct 1119



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1496 agaagatgtacattgaaatgtgtcaagaagaga 1464
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>ref|XM_506922.2| PREDICTED Oryza sativa (japonica cultivar-group), P0459B01.11 mRNA
          Length = 1626

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 1475 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 1416

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1415 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1356

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1355 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1296

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1295 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1236

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1235 tgctttagcatttgctgtgtcacct 1211



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1588 agaagatgtacattgaaatgtgtcaagaagaga 1556
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>gb|AF543191.1| Oryza sativa (indica cultivar-group) phosphoribulokinase precursor
            gene, complete cds
          Length = 2443

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 2269 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 2210

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 2209 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 2150

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 2149 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 2090

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2089 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 2030

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 2029 tgctttagcatttgctgtgtcacct 2005



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 2382 agaagatgtacattgaaatgtgtcaagaagaga 2350
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>gb|AF529237.2| Oryza sativa (indica cultivar-group) phosphoribulokinase precursor
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1663

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 1487 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 1428

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1427 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1368

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1367 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1308

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1307 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1248

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1247 tgctttagcatttgctgtgtcacct 1223



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1600 agaagatgtacattgaaatgtgtcaagaagaga 1568
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                            
Query: 122      tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
                ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 28722611 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 28722552

                                                                            
Query: 181      tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
                |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 28722551 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 28722492

                                                                            
Query: 235      gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
                || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 28722491 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 28722432

                                                                            
Query: 295      ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28722431 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 28722372

                                         
Query: 355      tgctttagcatttgctgtgtcacct 379
                |||||||||||||||||||||||||
Sbjct: 28722371 tgctttagcatttgctgtgtcacct 28722347



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 6        agaagatgtacattgaaatgtgttaagaggaga 38
                ||||||||||||||||||||||| |||| ||||
Sbjct: 28722724 agaagatgtacattgaaatgtgtcaagaagaga 28722692
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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                         
Query: 122   tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
             ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 39184 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 39125

                                                                         
Query: 181   tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
             |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 39124 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 39065

                                                                         
Query: 235   gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
             || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 39064 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 39005

                                                                         
Query: 295   ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 39004 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 38945

                                      
Query: 355   tgctttagcatttgctgtgtcacct 379
             |||||||||||||||||||||||||
Sbjct: 38944 tgctttagcatttgctgtgtcacct 38920



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 6     agaagatgtacattgaaatgtgttaagaggaga 38
             ||||||||||||||||||||||| |||| ||||
Sbjct: 39297 agaagatgtacattgaaatgtgtcaagaagaga 39265
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>dbj|AK119485.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-C05, full
           insert sequence
          Length = 1480

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Plus

                                                                       
Query: 122 tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
           ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 116 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 175

                                                                       
Query: 181 tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
           |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 176 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 235

                                                                       
Query: 235 gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
           || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 236 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 295

                                                                       
Query: 295 ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 296 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 355

                                    
Query: 355 tgctttagcatttgctgtgtcacct 379
           |||||||||||||||||||||||||
Sbjct: 356 tgctttagcatttgctgtgtcacct 380



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 8  aagatgtacattgaaatgtgttaagaggaga 38
          ||||||||||||||||||||| |||| ||||
Sbjct: 5  aagatgtacattgaaatgtgtcaagaagaga 35
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>dbj|AK099461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023E19, full
            insert sequence
          Length = 1625

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 1474 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 1415

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1414 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1355

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1354 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1295

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1294 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1235

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1234 tgctttagcatttgctgtgtcacct 1210



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1587 agaagatgtacattgaaatgtgtcaagaagaga 1555
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>dbj|AK066164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056N04, full
            insert sequence
          Length = 1555

 Score =  270 bits (136), Expect = 3e-69
 Identities = 236/265 (89%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| |||||||| | |||||||| |||| ||||
Sbjct: 1382 tcttctagctgtaatatttccaaaactagttacaagaaatgcgaggatgcccattgtcat 1323

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1322 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1263

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1262 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1203

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1202 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1143

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1142 tgctttagcatttgctgtgtcacct 1118



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1495 agaagatgtacattgaaatgtgtcaagaagaga 1463
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>dbj|AK104857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C08, full
            insert sequence
          Length = 1494

 Score =  262 bits (132), Expect = 8e-67
 Identities = 235/265 (88%), Gaps = 7/265 (2%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcttctagctgtaatatattcaaa-ctagtcacaagaaacgtgaggatgctcattctcat 180
            ||||||||||||||||| | |||| ||||| ||||| || | |||||||| |||| ||||
Sbjct: 1341 tcttctagctgtaatatttccaaaactagttacaaggaatgcgaggatgcccattgtcat 1282

                                                                        
Query: 181  tga----gt-tggtgatgaaatgattcatgaact-tgaatttggggctcatcaaactttt 234
            |||    || ||||||||||  |||||| ||| | ||||| ||| |||||| ||||||||
Sbjct: 1281 tgatatggtatggtgatgaagagattcacgaaatatgaatgtggagctcattaaactttt 1222

                                                                        
Query: 235  gctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagatctctaatc 294
            || ||||||| |||  | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1221 gccgcttcagtaggtgcaccggccctctcagcaataatctgctcatagagatctctaatc 1162

                                                                        
Query: 295  ttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgggaagtctgca 354
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1161 ttcagtcctacgatagtttggaagagacctgttccattgttgctgccggggaagtctgca 1102

                                     
Query: 355  tgctttagcatttgctgtgtcacct 379
            |||||||||||||||||||||||||
Sbjct: 1101 tgctttagcatttgctgtgtcacct 1077



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 6    agaagatgtacattgaaatgtgttaagaggaga 38
            ||||||||||||||||||||||| |||| ||||
Sbjct: 1454 agaagatgtacattgaaatgtgtcaagaagaga 1422
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>gb|AY106347.1| Zea mays PCO092382 mRNA sequence
          Length = 1513

 Score =  188 bits (95), Expect = 9e-45
 Identities = 152/172 (88%)
 Strand = Plus / Minus

                                                                        
Query: 227  aaacttttgctgcttcagcaggaacgccggccctctcagcaatgatctgttcatagagat 286
            |||||||||||||||| || || || || |||||||||||||  |||||||||||||| |
Sbjct: 1261 aaacttttgctgcttccgctggtacaccagccctctcagcaacaatctgttcatagaggt 1202

                                                                        
Query: 287  ctctaatcttcagtcctacgatagtttggaagagacctgttccattgttgctgcctggga 346
            |||||||||||||||| | ||| || |||||||||||||| || |||||||| |||||||
Sbjct: 1201 ctctaatcttcagtccaatgatggtctggaagagacctgtcccgttgttgctacctggga 1142

                                                                
Query: 347  agtctgcatgctttagcatttgctgtgtcacctncccntagaacttgnttga 398
            |||||||||||||||||||||| ||||||||||  || ||||||||| ||||
Sbjct: 1141 agtctgcatgctttagcatttgttgtgtcacctctccgtagaacttggttga 1090
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>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020,
             complete sequence
          Length = 80920

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                         
Query: 271   atctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacctgttcca 330
             ||||| ||||| |||||||| |||||||  || || || ||||||||||||||||| |||
Sbjct: 22136 atctgctcataaagatctcttatcttcaaaccaactatggtttggaagagacctgtccca 22077

                                                                         
Query: 331   ttgttgctgcctgggaagtctgcatgctttagcatttgctgtgtcacctncccntagaac 390
             |||||||| || ||||| || |||||||| | |||||| || || ||||  || ||||||
Sbjct: 22076 ttgttgctaccagggaaatcagcatgcttcaacatttgttgagtaacctctccatagaac 22017

                
Query: 391   ttg 393
             |||
Sbjct: 22016 ttg 22014
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>ref|NM_102940.3| Arabidopsis thaliana ATP binding / kinase/ phosphoribulokinase/
            uridine kinase AT1G32060 mRNA, complete cds
          Length = 1539

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 1269 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 1210

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 1209 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 1166
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>gb|BT000019.1| Arabidopsis thaliana phosphoribulokinase precursor (At1g32060) mRNA,
            complete cds
          Length = 1247

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 1151 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 1092

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 1091 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 1048
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>gb|AY128355.1| Arabidopsis thaliana phosphoribulokinase precursor (At1g32060) mRNA,
            complete cds
          Length = 1503

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 1257 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 1198

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 1197 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 1154
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>emb|X58149.1|ATPRK A.thaliana PRKase gene for Ribulose-5-phosphate kinase
          Length = 1495

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 1229 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 1170

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 1169 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 1126
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>gb|AY044335.1| Arabidopsis thaliana Unknown protein (T12O21.4) mRNA, complete cds
          Length = 1240

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 1151 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 1092

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 1091 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 1048
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>gb|AC074309.4|AC074309 Arabidopsis thaliana chromosome 1 BAC T12O21 genomic sequence,
            complete sequence
          Length = 75298

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 6487 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 6546

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 6547 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 6590
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>gb|AY084576.1| Arabidopsis thaliana clone 11226 mRNA, complete sequence
          Length = 1517

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcaatgatctgttcatagagatctctaatcttcagtcctacgatagtttggaagagacct 324
            ||||||| ||| |||||||||||||| ||||||| ||| || || |||||||| ||||| 
Sbjct: 1260 gcaatgagctgctcatagagatctctgatcttcaatccaacaatggtttggaaaagacca 1201

                                                        
Query: 325  gttccattgttgctgcctgggaagtctgcatgctttagcatttg 368
            || || |||||||| || ||||| || ||||| || ||||||||
Sbjct: 1200 gtaccgttgttgctacccgggaaatcagcatgtttgagcatttg 1157
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>gb|AY961946.1| Picea abies phosphoribulokinase mRNA, partial cds
          Length = 703

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 313 tggaagagacctgttccattgttgctgcctgggaagtctgcatgctttagcatttgctgt 372
           ||||||||||| || ||||| ||||| ||||| || ||||||||||| ||||| || |||
Sbjct: 365 tggaagagaccagtgccattattgctccctggaaaatctgcatgcttcagcatctgttgt 306

                                
Query: 373 gtcacctncccntagaacttg 393
           || || |  || |||||||||
Sbjct: 305 gttacttctccgtagaacttg 285
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>emb|X07654.1|SOPRK Spinach mRNA for phosphoribulokinase (EC 2.7.1.19)
          Length = 1470

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 310  gtttggaagagacctgttccattgttgctgcctgggaa 347
            |||||||||| ||| |||||||||||||| ||||||||
Sbjct: 1172 gtttggaagaaaccagttccattgttgcttcctgggaa 1135
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>gb|M21338.1|SPIPRK Spinach phosphoribulokinase (PRK) mRNA, 3' end
          Length = 1411

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 310  gtttggaagagacctgttccattgttgctgcctgggaa 347
            |||||||||| ||| |||||||||||||| ||||||||
Sbjct: 1141 gtttggaagaaaccagttccattgttgcttcctgggaa 1104
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>gb|M73707.1|CIPPRK Mesembryanthemum crystallinum phosphoribulokinase mRNA, complete CDS
          Length = 1520

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 310  gtttggaagagacctgttccattgttgctgcctgggaagtct 351
            |||||||||||||| ||||| |||||||| || |||||||||
Sbjct: 1235 gtttggaagagaccggttccgttgttgcttccagggaagtct 1194
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>emb|X61749.1|SMTBPA S.mytilis telomere-binding protein gene (alpha subunit) for Sty56V
          Length = 2141

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 194  aaatgattcatgaacttgaattt 216
            |||||||||||||||||||||||
Sbjct: 1862 aaatgattcatgaacttgaattt 1884
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>gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, complete sequence
          Length = 172661

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 191    atgaaatgattcatgaacttgaa 213
              |||||||||||||||||||||||
Sbjct: 160686 atgaaatgattcatgaacttgaa 160708
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>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence
          Length = 190902

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 191   atgaaatgattcatgaacttgaa 213
             |||||||||||||||||||||||
Sbjct: 21533 atgaaatgattcatgaacttgaa 21555
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>emb|Y11248.1|PSPHOBKIN P.sativum mRNA for phosphoribulokinase, partial
          Length = 1313

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 285  atctctaatcttcagtcctacgatagtttggaagagacctgttccattgttgctgcctgg 344
            |||||| |||||||  || || || ||||| || |||||||||||||||||||| || ||
Sbjct: 1000 atctcttatcttcaaaccaacaatggtttgaaacagacctgttccattgttgctaccagg 941

                           
Query: 345  gaagtctgcatgctt 359
             || || ||||||||
Sbjct: 940  aaaatcagcatgctt 926
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>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence
          Length = 162574

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 15    acattgaaatgtgttaagagga 36
             ||||||||||||||||||||||
Sbjct: 34618 acattgaaatgtgttaagagga 34597
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>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete
              sequence
          Length = 182503

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 90     ttttcatgagttctgcagtgaa 111
              ||||||||||||||||||||||
Sbjct: 129518 ttttcatgagttctgcagtgaa 129497
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>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 334   ttgctgcctgggaagtctgca 354
             |||||||||||||||||||||
Sbjct: 66785 ttgctgcctgggaagtctgca 66805
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>gb|AC024106.14| Homo sapiens 3 BAC RP11-33K7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 157523

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 334    ttgctgcctgggaagtctgca 354
              |||||||||||||||||||||
Sbjct: 103833 ttgctgcctgggaagtctgca 103813
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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 334   ttgctgcctgggaagtctgca 354
             |||||||||||||||||||||
Sbjct: 26179 ttgctgcctgggaagtctgca 26159
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>gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 133054

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   atgaaatgattcatgaactt 210
             ||||||||||||||||||||
Sbjct: 41427 atgaaatgattcatgaactt 41446
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>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence
          Length = 218363

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  tgaaatgattcatgaacttg 211
            ||||||||||||||||||||
Sbjct: 5943 tgaaatgattcatgaacttg 5924
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>gb|AC158582.2| Mus musculus chromosome 7, clone RP24-173K12, complete sequence
          Length = 169636

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tcaaaatgcaggttttcatg 97
              ||||||||||||||||||||
Sbjct: 135932 tcaaaatgcaggttttcatg 135951
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>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete
             sequence
          Length = 143029

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgaaatgattcatgaacttg 211
             ||||||||||||||||||||
Sbjct: 60352 tgaaatgattcatgaacttg 60371
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>emb|AJ245511.1|MTR245511 Medicago truncatula partial mRNA for ubiquitin
          Length = 229

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 ttctaccgtcttctagctgt 133
           ||||||||||||||||||||
Sbjct: 163 ttctaccgtcttctagctgt 144
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>gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome 9, complete sequence
          Length = 191328

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   tattcaaactagtcacaaga 157
             ||||||||||||||||||||
Sbjct: 73760 tattcaaactagtcacaaga 73741
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>gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164078

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                             
Query: 77    ttcaaaatgcaggttttcatgagttctgcagt 108
             ||||||||||||| ||||||| ||||||||||
Sbjct: 47742 ttcaaaatgcagggtttcatg-gttctgcagt 47772
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>emb|BX908397.7| Zebrafish DNA sequence from clone CH211-103F16 in linkage group 22,
             complete sequence
          Length = 87359

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   gtcttctagctgtaatatattcaa 144
             |||||||||||| |||||||||||
Sbjct: 39390 gtcttctagctgaaatatattcaa 39413
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>gb|AF067832.1|AF067832 Stylonychia mytilus micronuclear alpha telomere binding protein gene,
            complete sequence
          Length = 2686

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  aaatgattcatgaacttgaa 213
            ||||||||||||||||||||
Sbjct: 2443 aaatgattcatgaacttgaa 2462
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>gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, complete sequence
          Length = 196013

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    tcaaaatgcaggttttcatg 97
             ||||||||||||||||||||
Sbjct: 72018 tcaaaatgcaggttttcatg 72037


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,915,524
Number of Sequences: 3902068
Number of extensions: 3915524
Number of successful extensions: 72052
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71952
Number of HSP's gapped (non-prelim): 101
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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