ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal20b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase 39 0.019
2UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-f... 36 0.094
3MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI) 36 0.094
4TNNT_CAEEL (Q27371) Troponin T 35 0.16
5MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI) 35 0.21
6SAP1_SCHPO (P40847) Switch-activating protein 1 35 0.21
7TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger ... 35 0.21
8TIG_OCEIH (Q8CXB7) Trigger factor (TF) 34 0.36
9Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 ... 34 0.47
10PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-) 34 0.47
11FAR10_YEAST (Q06001) Factor arrest protein 10 34 0.47
12REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonse... 34 0.47
13CING_MOUSE (P59242) Cingulin 33 0.61
14RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC ... 33 1.0
15DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain pro... 33 1.0
16RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC ... 33 1.0
17RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC ... 33 1.0
18RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase 33 1.0
19Y164_METJA (Q57628) Hypothetical protein MJ0164 32 1.4
20DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein) 32 1.4
21YR445_MIMIV (Q5UQP3) DnaJ-like protein R445 32 1.8
22POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein V... 32 1.8
23POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein V... 32 1.8
24GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modi... 32 1.8
25RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC ... 32 1.8
26POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein V... 32 1.8
27POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein V... 32 1.8
28POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein V... 32 1.8
29TIG_HELHP (Q7VIN8) Trigger factor (TF) 32 1.8
30SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2 32 1.8
31GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modi... 32 2.3
32GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modi... 32 2.3
33USO1_YEAST (P25386) Intracellular protein transport protein USO1... 32 2.3
34POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein V... 32 2.3
35POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein V... 32 2.3
36POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein V... 32 2.3
37RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC ... 31 3.0
38RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC ... 31 3.0
39RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC ... 31 3.0
40LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only... 31 3.0
41CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11 31 3.0
42Y124_METJA (Q57588) Hypothetical protein MJ0124 31 3.0
43YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4 31 3.0
44PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin) 31 3.0
45SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like ... 31 4.0
46IF2_AQUAE (O67825) Translation initiation factor IF-2 31 4.0
47Y1739_STRPN (P67282) UPF0144 protein SP1739 31 4.0
48Y1584_STRR6 (P67283) UPF0144 protein spr1584 31 4.0
49IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2 31 4.0
50RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase 30 5.2
51RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70) 30 5.2
52DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain pro... 30 5.2
53IE68_SHV21 (Q01042) Immediate-early protein 30 5.2
54CE290_BOVIN (Q9TU23) Centrosomal protein Cep290 30 5.2
55BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protei... 30 5.2
56ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14) 30 5.2
57IOVO_TADRA (P68157) Ovomucoid (Fragment) 30 5.2
58IOVO_SARME (P68156) Ovomucoid (Fragment) 30 5.2
59IOVO_NEOJU (P68155) Ovomucoid (Fragment) 30 5.2
60IOVO_MERCU (P68154) Ovomucoid (Fragment) 30 5.2
61IOVO_LOPSP (P68153) Ovomucoid (Fragment) 30 5.2
62IOVO_DRONO (P05560) Ovomucoid (Fragment) 30 5.2
63IOVO_CYACY (P68152) Ovomucoid (Fragment) 30 5.2
64IOVO_COSCO (P05571) Ovomucoid (Fragment) 30 5.2
65IOVO_CHLPI (P68151) Ovomucoid (Fragment) 30 5.2
66IOVO_ANAPL (P68150) Ovomucoid (Fragment) 30 5.2
67IOVO_ANACA (P68149) Ovomucoid (Fragment) 30 5.2
68IOVO_ALOAE (P68148) Ovomucoid (Fragment) 30 5.2
69IOVO_AIXSP (P68145) Ovomucoid (Fragment) 30 5.2
70IOVO_AIXGA (P68144) Ovomucoid (Fragment) 30 5.2
71IOVO_GALCH (P68379) Ovomucoid (Fragment) 30 6.7
72IOVO_FULAT (P68378) Ovomucoid (Fragment) 30 6.7
73SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondr... 30 6.7
74CING_XENLA (Q9PTD7) Cingulin 30 6.7
75SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chon... 30 6.7
76SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chon... 30 6.7
77SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chon... 30 6.7
78ENGA_CHRVO (Q7NS92) GTP-binding protein engA 30 6.7
79TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TR... 30 6.7
80TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.... 30 6.7
81SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chon... 30 6.7
82ESSB_STAAW (Q7A1V2) Protein essB 30 6.7
83ESSB_STAAU (P0C053) Protein essB 30 6.7
84ESSB_STAAS (Q6GCI6) Protein essB 30 6.7
85ESSB_STAAR (Q6GK25) Protein essB 30 6.7
86ESSB_STAAN (Q7A7S0) Protein essB 30 6.7
87ESSB_STAAM (Q99WU0) Protein essB 30 6.7
88ESSB_STAAC (Q5HJ87) Protein essB 30 6.7
89MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A) 30 6.7
90RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70) 30 6.7
91PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal prot... 30 6.7
92KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase ty... 30 6.7
93PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type... 30 6.7
94CE290_HUMAN (O15078) Centrosomal protein Cep290 30 6.7
95SWC3_YEAST (P31376) SWR1-complex protein 3 30 8.8
96CING_HUMAN (Q9P2M7) Cingulin 30 8.8
97MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protei... 30 8.8
98FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1) 30 8.8
99IOVO_TINMA (P52254) Ovomucoid (Fragment) 30 8.8
100IOVO_CASCA (P62337) Ovomucoid (Fragment) 30 8.8
101IOVO_CASBE (P62336) Ovomucoid (Fragment) 30 8.8
102Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/E... 30 8.8 
>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase|
          Length = 882

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
 Frame = -3

Query: 664 ELDQIGDQIMERLDSKMQSYEE------TAEMQRQEIEMNERVLE--------DFEDWIE 527
           +L+  G + +E LDSK++  EE      T    ++E+E+ +R +          FE+  E
Sbjct: 581 KLESFGFKSVEDLDSKLRELEEIYKRYLTLLNSKKELEITQREIAKAKETLEMSFEELAE 640

Query: 526 EEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
            E +     K L ++K+  N EE K K + + +  +E+A   A  K
Sbjct: 641 VEADIERIEKKLSQLKQKYNEEEYKKKREEKEELEKELARLEAQKK 686



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 25/84 (29%), Positives = 42/84 (50%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N+ KEL+    +I +  ++   S+EE AE++  +IE  E+ L   +    EE+       
Sbjct: 612 NSKKELEITQREIAKAKETLEMSFEELAEVE-ADIERIEKKLSQLKQKYNEEEY------ 664

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQK 425
              K K+ +  E  K  A++EAQK
Sbjct: 665 ---KKKREEKEELEKELARLEAQK 685
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>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift|
           suppressor 3)
          Length = 387

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
 Frame = -3

Query: 676 NAMKEL---DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 506
           N+MK+L   D+   Q    L S  + + ++ E++ +  E  ERVL +     ++ KN+  
Sbjct: 216 NSMKQLNENDEYSFQDFSVLKSLEKEFSKSIELENKIAERTERVLTELVGTGDKVKNKNK 275

Query: 505 FFKSLG---KVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTR 383
             K+     K K+ + + +I  K +   +K RE  E+S  SKT+
Sbjct: 276 KKKNKNAKKKFKEEEASAKIPKKKRNRGKKKRENREKSTISKTK 319
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>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)|
          Length = 1285

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
 Frame = -3

Query: 667  KELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIEEEKNEGM 506
            KE D +    ++++  L  K Q  EE   ++R + EM +   R  ED +   +EE+   M
Sbjct: 897  KEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRM 956

Query: 505  FFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 401
              +   K K      K + ++E +++A++EAQ  R+  EES
Sbjct: 957  KLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEES 997
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>TNNT_CAEEL (Q27371) Troponin T|
          Length = 405

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = -3

Query: 622 SKMQSYEETAEMQRQEIEMNERVLEDFEDW--IEEEKNEGMFFKSLGKVKKPQNNEEIKV 449
           +K+  YE+   +++++IE   R L++ ++    E E++E  F +   +  + +  EE + 
Sbjct: 80  AKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDER 139

Query: 448 KAKIEAQKVREIAEE 404
           KAK +A+K+R+  E+
Sbjct: 140 KAKADAEKIRKNEEK 154
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>MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)|
          Length = 1265

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
 Frame = -3

Query: 667  KELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIEEEKNEGM 506
            KE D +    + ++  L  K Q  EE   ++R + EM +   R  ED E   +EE+   M
Sbjct: 900  KEYDALVKSSEDLLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEERRRKEEEERRM 959

Query: 505  FFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 401
              +   K K      K + ++E ++++++EAQ  R+  EES
Sbjct: 960  KLEMEPKRKQEEEERKKREDDEKRIQSEVEAQLARQREEES 1000
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>SAP1_SCHPO (P40847) Switch-activating protein 1|
          Length = 254

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -3

Query: 664 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 485
           ELDQ+ D+   RL S++Q Y E   + +++ + N+ + E  +   EE++N  M    +  
Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNF 169

Query: 484 VKKP-QNNEE--IKVKAKIE 434
           + K   +NEE  ++V AK++
Sbjct: 170 LSKHLHDNEEKLMQVNAKMD 189
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>TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger protein)|
            (Negative regulator of IL2)
          Length = 1124

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -3

Query: 667  KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDF--EDWIEEEKNEGMFFKS 494
            +E D+  ++  E  D +M+  +E  E ++ + +  E   E+   E+ +EE +NEG   K+
Sbjct: 1030 REEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGEEAKT 1089

Query: 493  LGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 386
             G +K    ++  + +A    QKV E +E+ +  KT
Sbjct: 1090 EGLMK----DDRAESQASSLGQKVGESSEQVSEEKT 1121
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>TIG_OCEIH (Q8CXB7) Trigger factor (TF)|
          Length = 428

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 19/88 (21%), Positives = 45/88 (51%)
 Frame = -3

Query: 667 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 488
           KEL ++ D+  + +D +++S +E  + +R E+E N++        +E +K E +      
Sbjct: 245 KELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK------QEVENKKREEL------ 292

Query: 487 KVKKPQNNEEIKVKAKIEAQKVREIAEE 404
            ++K  +N E+ +   +   +V ++  E
Sbjct: 293 -IQKASDNVEVDIPEAMVDTEVNQMVRE 319
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>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)|
          Length = 778

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
 Frame = -3

Query: 622 SKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM-----FFKSLGKVKKPQNNEE 458
           SK +  EET E++ +EIE    V E+ ++  EEEK +       F K + +VK+   +EE
Sbjct: 504 SKEEIKEETEEIKEKEIESKTAVKEETKE--EEEKTKKPVTILDFIKQI-EVKERSKSEE 560

Query: 457 IKVKAKIEAQK--VREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEWRKVA 290
            K+K +I+  K  ++ I +    +  ++    A + +  L + + V +   V  RK A
Sbjct: 561 DKIKQEIKIPKKPIKIIVDVREKNMAKLLHNYANIELKTLEVGDYVLSDRVVVERKTA 618
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>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 413

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -3

Query: 646 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 467
           D++ E+++  +  YE+   ++ +E EM +   E  E   +EEK E    +   ++KK + 
Sbjct: 314 DRLCEKINHPLAYYEKKIYLKNKEKEMEKEKEEKEEKEKQEEKKEEEEKEKQEEIKKKKK 373

Query: 466 NEEIKVKA-KIEAQKVREIAEE 404
            E+ + K  KI+  K RE  +E
Sbjct: 374 KEKQEEKGKKIKEGKKRERKQE 395
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>FAR10_YEAST (Q06001) Factor arrest protein 10|
          Length = 478

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N    L+     ++E+ D ++   +    ++R+     E+++E   + +++ + + MFFK
Sbjct: 312 NYTTHLEYTNKLLVEKNDQQLVKLQNG--LRRKLSGKYEKIIEQNRNQVKQLERDHMFFK 369

Query: 496 SLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSK 389
              +VKK +NNE+ K ++ +IE  K R   E    S+
Sbjct: 370 KSFEVKKRRNNEKQKSMEREIEDLKTRLEVERYKNSQ 406
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>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA|
           reducing factor 3B) (Up-frameshift suppressor 3 homolog
           B) (hUpf3B) (hUpf3p-X)
          Length = 483

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = -3

Query: 604 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 425
           E+  E +R+EIE   +  E+   W EEEK +    + L K+ +    +++K + KI+  +
Sbjct: 213 EKREERRRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHR 272
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>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
 Frame = -3

Query: 667  KELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
            KEL+QIGD     +++L ++M+ Y+E A   R+E+   +R  +D+    E EKN G   +
Sbjct: 844  KELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS--EAEKNSGGLSR 898

Query: 496  SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 389
               ++++            +  ++  ++ AQ+++ + +E+   K
Sbjct: 899  LQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 942
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>RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1407

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/53 (24%), Positives = 33/53 (62%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 374
           +E +K EGM F +  ++K+  +N  +++ AK++  ++ EI  +  G +++ ++
Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDRGLRSKASL 568
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>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)|
          Length = 705

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = -3

Query: 628 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 449
           LD++++  +E  E +RQE E  ER   + E  IEE +            +K Q+ E  + 
Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246

Query: 448 KAKIEAQKV----REIAEESAGSKTRMNI 374
           K +++ Q +    R+  EES   K+   +
Sbjct: 247 KRRLKEQSIFGDQRDEEEESQMKKSESEV 275
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>RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/49 (26%), Positives = 31/49 (63%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 386
           +E +K EGM F +  +VK+  +N  +++ AK++  ++ ++  E+ G ++
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
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>RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/49 (26%), Positives = 31/49 (63%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 386
           +E +K EGM F +  +VK+  +N  +++ AK++  ++ ++  E+ G ++
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
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>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase|
          Length = 993

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 25/105 (23%), Positives = 51/105 (48%)
 Frame = -3

Query: 646 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 467
           ++  E+++   +SYEET      E+     +LE+ E  ++ E +E    K    +KK +N
Sbjct: 161 EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEK-LKNEVSESEILKE-EILKKYEN 218

Query: 466 NEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIAN 332
            E++K++   E  ++ E   E+   K  +   ++ +  + L I N
Sbjct: 219 LEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQN 263
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>Y164_METJA (Q57628) Hypothetical protein MJ0164|
          Length = 395

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = -3

Query: 670 MKELDQIGDQIMERLDS--------KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 515
           MK LD+  ++  E+ DS          +  EE + + R+E+     + E  E+WIE    
Sbjct: 239 MKILDENENKSSEKADSLESEGSITTAEEIEEESTVSREELLKKLGIKEPDENWIE---- 294

Query: 514 EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 374
                  L  V +P + E  ++K KIE++ V ++      S   +N+
Sbjct: 295 -----TILEDVFRPSDEELEELKEKIESEIVNKVKRMEGVSDVLVNL 336
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>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)|
          Length = 706

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = -3

Query: 628 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 449
           LD++++  +E  E +RQE E  ER   + E  IEE +            +K Q+ E  + 
Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246

Query: 448 KAKIEAQKV----REIAEESAGSKTRMNI 374
           K +++ Q +    R+  EES   K+   +
Sbjct: 247 KRRLKDQSIFGDQRDEEEESQMKKSESEV 275
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>YR445_MIMIV (Q5UQP3) DnaJ-like protein R445|
          Length = 368

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = -3

Query: 586 QRQEIEMNERVLEDFE---DWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 431
           ++Q  E N+R++ + +   D+++ +K    F  S+G++K+P N +++  K +++A
Sbjct: 73  EKQRNEYNQRLIVEKQACSDYLKLKKRYNDFADSIGELKEPSNEQKLSFKEQMKA 127
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>POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2213

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1912 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1971

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1972 KIPVLMEEKLFAFDYTGYDASLSP 1995
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>POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2206

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1965 KIPVLMEEKLFAFDYTGYDASLSP 1988
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>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -3

Query: 610 SYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 431
           +YE    +   E+E+++ V E  E  I   K EG   KSL +V++ +  E  K+   I+ 
Sbjct: 519 TYEHIHLLVPSEVELSDEVTEQVEIQI---KYEGYIEKSLQQVERMKKMESKKIPVDIDY 575

Query: 430 QKVREIAEES 401
             +  +A E+
Sbjct: 576 DAISSLASEA 585
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>RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1407

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 16/71 (22%), Positives = 39/71 (54%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 353
           +E +K EGM F +  ++K+  +N  +++ AK++  ++ EI  +  G + + +      +I
Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDQGLRNKAS------SI 569

Query: 352 LGLTIANAVFA 320
           +  T+  A+ +
Sbjct: 570 VDTTVGRALLS 580
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>POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2205

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHRNPGVVTGSAVGCDPDLFWS 1963

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
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>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2205

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
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>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2205

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
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>TIG_HELHP (Q7VIN8) Trigger factor (TF)|
          Length = 442

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
 Frame = -3

Query: 667 KELDQIGDQIMERL---DSKMQS----YEETAEM-QRQEI---EMNERVLE--------D 545
           KEL +I D+  + +   +S +QS     +E  EM Q+ EI   E+ E+++E        D
Sbjct: 247 KELPKIDDEFAKSIAGEESNLQSLKDMIKEQLEMEQKTEIYNKELKEKLVEILLKNISFD 306

Query: 544 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLA 365
             D I E++ + +F  +L ++ KP+  ++IK   + EA+K RE  ++ A    ++   + 
Sbjct: 307 LPDLIVEQEMDILFRNALSQL-KPEEFDKIK-NNQDEAKKQRETHKDEARKSVQITFIMD 364

Query: 364 LMA 356
            +A
Sbjct: 365 ALA 367
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>SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2|
          Length = 590

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = -3

Query: 667 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 488
           K+ D+I ++  E +++  +  ++  E + QE E  +    + E+  E+E+NE    K L 
Sbjct: 495 KQKDEIIEEKPEVIETPAKEDDKEEEEEEQEEEKEQEKEHENEEAPEDEQNEDA--KPLT 552

Query: 487 KVKKPQNNEEIKVKAKIEAQK------VREIAEE 404
           K +K   N+  K K + + QK      V E+AE+
Sbjct: 553 KTQK--KNQSKKAKKQQQKQKQNETNDVEEVAED 584
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>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -3

Query: 610 SYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 431
           +YE    +   E+E+++ V E  E  I   K EG   KSL +V++ +  E  K+   I+ 
Sbjct: 519 TYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGYIEKSLQQVERMKKMENKKIPVDIDY 575

Query: 430 QKVREIAEES 401
             +  +A E+
Sbjct: 576 DAISSLASEA 585
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>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -3

Query: 610 SYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 431
           +YE    +   E+E+++ V E  E  I   K EG   KSL +V++ +  E  K+   I+ 
Sbjct: 519 TYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGYIEKSLQQVERMKKMENKKIPVDIDY 575

Query: 430 QKVREIAEES 401
             +  +A E+
Sbjct: 576 DAISSLASEA 585
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>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)|
          Length = 1790

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 20/103 (19%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
 Frame = -3

Query: 667  KELDQIGDQIMERLDSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 506
            ++L+ + +Q+    +SK      ++  EE +  ++ E+E ++ +++  E  I  E NE  
Sbjct: 1463 RDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTI--ESNETE 1520

Query: 505  FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMN 377
               S+  ++K  ++E+++   K   + ++ +  E +   +R+N
Sbjct: 1521 LKSSMETIRK--SDEKLEQSKKSAEEDIKNLQHEKSDLISRIN 1561
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>POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2204

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964

Query: 298  KVAAL 284
            K+  L
Sbjct: 1965 KIPVL 1969
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>POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2208

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
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>POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2208

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 299
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966

Query: 298  KVAALGLIFIGLVAQVTYEQDISP 227
            K+  L    +       Y+  +SP
Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
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>RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 386
           +E +K EGM F +  +VK+  +N  +++ AK++ +  +   +   G +T
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDAVDGKRT 565
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>RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 386
           +E +K EGM F +  +VK+  +N  +++ AK++ +  +   +   G +T
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
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>RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 532 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 386
           +E +K EGM F +  +VK+  +N  +++ AK++ +  +   +   G +T
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
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>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -3

Query: 667  KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 524
            K LDQIG+    +  SK +     AE++RQ+I  EM +R  L +   WI +
Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489
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>CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11|
          Length = 399

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -3

Query: 646 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 467
           D  M+ +   +Q  ++ A+ ++Q+ E   R  + + D++ + + E        K ++ + 
Sbjct: 193 DLNMKLVGRALQDLQDEADKKKQKREEMGREQKIYNDYLMQRREEE-------KAQEKEL 245

Query: 466 NEEIK-VKAKIEAQKVREIAEESAGSKTRMN 377
           N  ++ +KAK  A+K RE+A + A  K  MN
Sbjct: 246 NRLLEDIKAKKLAEKDRELALQRAARKQLMN 276
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>Y124_METJA (Q57588) Hypothetical protein MJ0124|
          Length = 1075

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 16/85 (18%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -3

Query: 658  DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGMFFKSL 491
            + IG + ++R  +      + + + +Q   + + +LE  E    DWI +  ++ ++  ++
Sbjct: 895  ENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAI 954

Query: 490  GKVKKPQNNEEIKVKAKIEAQKVRE 416
              + + +NN + K+K K   ++++E
Sbjct: 955  KNLMELKNNYDKKIKGKSSIERIKE 979
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>YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4|
          Length = 267

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -3

Query: 382 MNIYLALMAILGLTIANAVFATPEVEWRKVAALGLIFIGLVAQVTYE 242
           +N  L L+A+LG+    +    P + W+ V  L L+F+G ++   Y+
Sbjct: 76  VNFSLVLLALLGINSKVSSMILPALVWKCVLLLFLLFLGCISVDAYQ 122
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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
 Frame = -3

Query: 643  QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEEEKNEGMFFKSLGKVKK 476
            Q +E L  ++Q  EE AE+Q  E+E N    E  +ED    I+E       F++  K K+
Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE-------FEAALKAKE 1867

Query: 475  PQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEW 302
                E      +I+A   R+ A  +      + +     A+    +A A  A PE++W
Sbjct: 1868 ATIAER---NLEIDALNQRKAAHSAELEAVLLALARIRRALEQQPLA-AGAAPPELQW 1921
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>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein|
           (Chromosome-associated protein E) (hCAP-E) (XCAP-E
           homolog)
          Length = 1197

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
 Frame = -3

Query: 652 IGDQIMERLDSKMQSYEETAEMQ------RQEIEMNERVLEDFEDWIEE-----EKNEGM 506
           I  Q +   D+K++S EE  EMQ      ++E+  N++ ++     IEE     +K  G+
Sbjct: 235 IAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGV 294

Query: 505 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 374
             +SL            K ++  + +K     EES   +   N+
Sbjct: 295 ILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNM 338
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>IF2_AQUAE (O67825) Translation initiation factor IF-2|
          Length = 805

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNER---VLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 467
           +++ + K +  EE  E ++ +I+M+++   ++   E  +E+EK +    +   + +K + 
Sbjct: 162 VKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEKKK----QEKREKEKKKK 217

Query: 466 NEEIKVKAKIEAQKVREIAE 407
            EE+K+    E   VRE+AE
Sbjct: 218 EEEVKIIYIPEVITVRELAE 237



 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = -3

Query: 646 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 467
           +++++ +  K +  +E  +++++  E   RV+E  ++  +EEK E    +   K+K  + 
Sbjct: 129 EELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKK 188

Query: 466 NEEI--KVKAKIEAQKVREIAEESAGSK 389
             EI  K++  +E +K ++   E    K
Sbjct: 189 EREIMRKLEHAVEKEKKKQEKREKEKKK 216
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>Y1739_STRPN (P67282) UPF0144 protein SP1739|
          Length = 534

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
 Frame = -3

Query: 667 KELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEE-EKNEG 509
           +EL QI  ++ ER       D  + S E+T E + Q I    + L+  E+ +EE E+ + 
Sbjct: 96  QELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKE 155

Query: 508 MFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 410
              + +G + + +  + I   A+ E    REIA
Sbjct: 156 AELERIGALSQAEARDII--LAQTEENLTREIA 186
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>Y1584_STRR6 (P67283) UPF0144 protein spr1584|
          Length = 534

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
 Frame = -3

Query: 667 KELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEE-EKNEG 509
           +EL QI  ++ ER       D  + S E+T E + Q I    + L+  E+ +EE E+ + 
Sbjct: 96  QELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKE 155

Query: 508 MFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 410
              + +G + + +  + I   A+ E    REIA
Sbjct: 156 AELERIGALSQAEARDII--LAQTEENLTREIA 186
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>IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2|
          Length = 886

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -3

Query: 631 RLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK 452
           RL+ + ++ +E AE++ ++ E   +  ED +   +EE       +   K K+    +  K
Sbjct: 118 RLEEQQKAAQEAAELKAKQ-EAERKAKEDADRKAKEEAKRKADAERKAKQKQMTPEQSAK 176

Query: 451 V-KAKIEAQKVREIAEESAGSK 389
             K +IEA+++++ AEE+A  K
Sbjct: 177 SEKDRIEAERLQKEAEEAALKK 198
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>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase|
          Length = 1070

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -3

Query: 673 AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGM 506
           A+KE +  GD  +  LDS+MQS        + EIE  E+ + D      D+ E++     
Sbjct: 438 ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIEALEKEIRDNSKAVLDFQEQKSEVFA 496

Query: 505 FFKSLGKVKKPQNNEE 458
             K+LG  ++   N E
Sbjct: 497 GLKALGFTEEQLENLE 512
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>RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 681

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = -3

Query: 619 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 446
           K+++ EE  ++  +E+E     L+  DF +W   +    M+ + +G +K    +EEI++ 
Sbjct: 133 KIKNTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 192

Query: 445 AKI 437
            +I
Sbjct: 193 KQI 195
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>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)|
          Length = 648

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 628 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 449
           LD +++  +E  E +RQE E  ER   + E  IEE +            +K Q  E  + 
Sbjct: 199 LDERLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQTLEAEEA 246

Query: 448 KAKIEAQKV----REIAEESAGSKTRMNI 374
           K +++ Q +    R+  EE+   K+   +
Sbjct: 247 KRRLKEQSIFGDHRDEEEETHMKKSESEV 275
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>IE68_SHV21 (Q01042) Immediate-early protein|
          Length = 407

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 604 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 425
           EE  E + +E E  E   E+ E+  EEE+ E    +     ++    EE +   + EA++
Sbjct: 94  EEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEE 153

Query: 424 VREIAEE 404
             E AEE
Sbjct: 154 AEEEAEE 160
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>CE290_BOVIN (Q9TU23) Centrosomal protein Cep290|
          Length = 1453

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           +E L+ +  S +E  E   +E+E+ +  L   E   E+E   G    ++ K KK   N E
Sbjct: 72  LEHLECENVSLKEQMESINKELEITKEKLHTIEQAWEQETKLGN-ESNMDKAKKSVTNSE 130

Query: 457 I-KVKAKIEAQKVREIAE 407
           I  +  KI   +++E+ E
Sbjct: 131 IVSISKKITMLEMKELNE 148
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>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens|
           fiber cell beaded-filament structural protein CP 115)
           (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
          Length = 665

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3

Query: 661 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 548
           L+Q      E  D ++Q Y E  E  R+EIE  ERVLE
Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286
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>ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14)|
          Length = 159

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = -3

Query: 619 KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAK 440
           K  +  E A + + E E N          +E+ K +G       KVK  + +EEI  +AK
Sbjct: 47  KADAQNEEARLLKVESEKN----------LEDSKLQGKTIVENYKVKAEKVSEEITAEAK 96

Query: 439 IEAQKVREIAE 407
            EAQ + E A+
Sbjct: 97  TEAQNILERAK 107
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>IOVO_TADRA (P68157) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_SARME (P68156) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_NEOJU (P68155) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_MERCU (P68154) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_LOPSP (P68153) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_DRONO (P05560) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 380 EYLPCTHGDTRSYNRKCRLCN 318
           EY+P    D+++YN KC  CN
Sbjct: 17  EYMPLCGSDSKTYNNKCDFCN 37
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>IOVO_CYACY (P68152) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_COSCO (P05571) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_CHLPI (P68151) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_ANAPL (P68150) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_ANACA (P68149) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_ALOAE (P68148) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_AIXSP (P68145) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_AIXGA (P68144) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
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>IOVO_GALCH (P68379) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      S EY+P    D ++Y+ KC  CN
Sbjct: 5   DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
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>IOVO_FULAT (P68378) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      S EY+P    D ++Y+ KC  CN
Sbjct: 5   DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
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>SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6) (Chromosome segregation protein
           SmcD) (Bamacan) (Basement membrane-associated
           chondroitin proteoglycan)
          Length = 1191

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 457 IKVKAKIEAQKVREIAEESAGS 392
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
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>CING_XENLA (Q9PTD7) Cingulin|
          Length = 1360

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
 Frame = -3

Query: 655 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKV 482
           Q+ D++ +R+  +       A MQR EIE+ E   E    ++  E++KNE +   S   +
Sbjct: 451 QLDDEMKQRMKLETSQGRPKAGMQRLEIELEESKEECSRLKELYEKKKNE-LSAMSQELM 509

Query: 481 KKPQNNEEIKVKAKIEAQKVREIAEE 404
           +     E+++ K +    K+ +  EE
Sbjct: 510 EVRMGKEQVETKLRTMEDKLMDSKEE 535
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>SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6)
          Length = 1217

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 457 IKVKAKIEAQKVREIAEESAGS 392
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
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>SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6) (Chromosome segregation protein
           SmcD) (Bamacan) (Basement membrane-associated
           chondroitin proteoglycan) (Mad member-interacting
           protein 1)
          Length = 1217

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 457 IKVKAKIEAQKVREIAEESAGS 392
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
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>SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6) (Chromosome-associated
           polypeptide) (hCAP) (Bamacan) (Basement
           membrane-associated chondroitin proteoglycan)
          Length = 1217

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 457 IKVKAKIEAQKVREIAEESAGS 392
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
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>ENGA_CHRVO (Q7NS92) GTP-binding protein engA|
          Length = 469

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 571 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 392
           E+ E VLE F D +EEE +    F  +G   +P   +   V A +  ++V  IA + AG+
Sbjct: 154 ELMELVLEGFPDEVEEEDSRHPKFAVIG---RPNVGKSTLVNAILGEERV--IAFDQAGT 208

Query: 391 KTRMNIYL 368
            TR +IY+
Sbjct: 209 -TRDSIYI 215
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>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)|
           (Golgi-associated microtubule-binding protein 210)
           (GMAP-210) (Trip230) (Clonal evolution related gene on
           chromosome 14)
          Length = 1979

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/91 (20%), Positives = 42/91 (46%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N  +E+D    ++    ++  Q   E +   R+E+   E  +E+ E+ + ++   G+   
Sbjct: 224 NRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELENLL-QQGGSGVIET 282

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 404
            L K+ + Q   ++    K+E+ K  E  E+
Sbjct: 283 DLSKIYEMQKTIQVLQIEKVESTKKMEQLED 313
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>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic|
           acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome
           P450 73)
          Length = 506

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -3

Query: 571 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK--VKAKIEAQKVREIAEES 401
           E+ E  L+ F+D+  +E+      K LG  K   NN E+K  +   ++AQ+  EI E++
Sbjct: 244 EVKETRLKLFKDYFVDER------KKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDN 296
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>SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6)
          Length = 1218

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 457 IKVKAKIEAQKVREIAEESAGS 392
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
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>ESSB_STAAW (Q7A1V2) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>ESSB_STAAU (P0C053) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>ESSB_STAAS (Q6GCI6) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>ESSB_STAAR (Q6GK25) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>ESSB_STAAN (Q7A7S0) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>ESSB_STAAM (Q99WU0) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>ESSB_STAAC (Q5HJ87) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 676 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 496 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 389
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
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>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)|
          Length = 1969

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
 Frame = -3

Query: 670  MKELDQIGDQIMERL----DSKMQSYEETAEMQRQ--------EIEMNERVLEDFEDWIE 527
            + +L+ + D+I+ R+     S+++SY   AE++R+         ++ N R       W  
Sbjct: 783  LAKLEDLRDEILSRIVTMFQSRIRSYLAKAEVRRRYEQQTGLLVVQRNVRAWCTLRTW-- 840

Query: 526  EEKNEGMFFKSLGKVK---KPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMA 356
                   +FK  GKVK   K    +E   +  ++ QK+ E  +    +++++   +A + 
Sbjct: 841  ------EWFKLFGKVKPMLKAGKEQEAMGELAVKIQKLEEAVQRGEIARSQLESQVADL- 893

Query: 355  ILGLTIANAVFATPEVEWRKVA 290
               +   NA+F + E E   +A
Sbjct: 894  ---VEEKNALFLSLETEKANLA 912
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>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 671

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -3

Query: 619 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 446
           K++  EE  ++  +E+E     L+  DF +W   +    M+ + +G +K    +EEI++ 
Sbjct: 123 KIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 182

Query: 445 AKI 437
            +I
Sbjct: 183 KQI 185
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>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 33/138 (23%), Positives = 59/138 (42%)
 Frame = -3

Query: 643  QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 464
            Q++E   +++Q     A  +RQE+E            +  E    +  K+  + +    +
Sbjct: 1867 QLLEEELARLQREAAAATQKRQELEAELAK-------VRAEMEVLLASKAKAEEESRSTS 1919

Query: 463  EEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEWRKVAAL 284
            E+ K + + EA + RE+AEE+A  +      LA  A     +A    A    E  +V A 
Sbjct: 1920 EKSKQRLEAEAGRFRELAEEAARLRA-----LAEEAKRQRQLAEEDAARQRAEAERVLAE 1974

Query: 283  GLIFIGLVAQVTYEQDIS 230
             L  IG   ++  E +I+
Sbjct: 1975 KLAAIGEATRLKTEAEIA 1992
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>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin)
          Length = 474

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
 Frame = -3

Query: 655 QIGDQIMERLDSKMQS---------YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMF 503
           Q G    + L++KMQ+          +ET ++Q +E+E  E V E+ E+  EEE+   M 
Sbjct: 359 QDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEEEEGVKEEEEEEEEEEETSRMV 418

Query: 502 FKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 392
                    PQ  E+   + + + Q+++  +EE+  S
Sbjct: 419 ---------PQEPED---RLETDDQEMKRNSEETLKS 443
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>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -2

Query: 476  TSKQ*GNQGEGQDRSTEGQRDCRGECGVKNSDEYLPCTHGDTRSYNRKC-RLCNTRGGME 300
            TS + G  G  + +  +    C+ +C    +D+ L C H DT  Y+  C + C  R   E
Sbjct: 860  TSCEDGEYGTEEGKCEDCNIICK-KCNGSQADQCLEC-HHDTNLYDTTCVQYCGNRRYPE 917

Query: 299  EGCCSGSNFHWPGCSG 252
             G C   +    GC G
Sbjct: 918  NGECHPCHPSCLGCIG 933
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>CE290_HUMAN (O15078) Centrosomal protein Cep290|
          Length = 1539

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -3

Query: 637 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 458
           +E L+ +  S +E  E   +E+E+ +  L   E   E+E   G    S+ K KK   N +
Sbjct: 53  LEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGN-ESSMDKAKKSITNSD 111

Query: 457 I-KVKAKIEAQKVREIAE 407
           I  +  KI   +++E+ E
Sbjct: 112 IVSISKKITMLEMKELNE 129
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>SWC3_YEAST (P31376) SWR1-complex protein 3|
          Length = 625

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/69 (23%), Positives = 35/69 (50%)
 Frame = -3

Query: 625 DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 446
           D   Q +++  E++++E E+  +   + +    EE+      K + K +K Q  +E K K
Sbjct: 177 DKIEQKWQDEQELKKKEKELKRKNDAEAKRLRMEERKRQQMQKKIAKEQKLQLQKENKAK 236

Query: 445 AKIEAQKVR 419
            K+E + ++
Sbjct: 237 QKLEQEALK 245
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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 22/104 (21%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
 Frame = -3

Query: 667  KELDQIGD---QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 497
            KEL++IG+   Q +++L ++++ Y+E A   R+E+   +R  +D+    E EK  G   +
Sbjct: 850  KELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKDWAS--EAEKTSGGLSR 904

Query: 496  SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 389
               ++++            +  ++  ++ AQ+++ + +E+   K
Sbjct: 905  LQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKK 948
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>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M|
           phase phosphoprotein 10)
          Length = 681

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
 Frame = -3

Query: 622 SKMQSYEETAEMQRQEIEMNERVLED---FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK 452
           S+M++Y E  E + +  + N+   ED   FED I+ +++EG  F S  K+K  +++  +K
Sbjct: 208 SEMEAYLENIEKEEERKDDNDEEEEDIDFFED-IDSDEDEGGLFGS-KKLKSGKSSRNLK 265

Query: 451 VK 446
            K
Sbjct: 266 YK 267
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>FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1)|
          Length = 428

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
 Frame = -3

Query: 610 SYEETAEMQRQEIEMNERVLEDFEDW----IEEEKNEGMFFKSLGKVKKPQNNEEIKVKA 443
           +YE  A  ++Q+I + E  +E  +      IEE++ E    + +  VK+P   E  K++ 
Sbjct: 240 AYELEAAKEQQKIRLEEIEIEVVQRKKQISIEEKEIERTEKELIATVKRPAEAEAYKMQQ 299

Query: 442 KIEAQKVREIAEESAGSK 389
             E QK++++    A S+
Sbjct: 300 LAEGQKLKKVLIAQAESE 317
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>IOVO_TINMA (P52254) Ovomucoid (Fragment)|
          Length = 51

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 416 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 318
           DC G      + EY P    D ++Y+ KC  CN
Sbjct: 4   DCSGYPKPACTAEYFPLCGSDNQTYSNKCAFCN 36
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>IOVO_CASCA (P62337) Ovomucoid (Fragment)|
          Length = 54

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 386 SDEYLPCTHGDTRSYNRKCRLCN 318
           S EY+P    D+++YN KC  C+
Sbjct: 15  SPEYMPLCGSDSKTYNNKCDFCS 37
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>IOVO_CASBE (P62336) Ovomucoid (Fragment)|
          Length = 54

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 386 SDEYLPCTHGDTRSYNRKCRLCN 318
           S EY+P    D+++YN KC  C+
Sbjct: 15  SPEYMPLCGSDSKTYNNKCDFCS 37
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>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040|
          Length = 592

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -3

Query: 667 KELDQIGDQIMERLDSKMQSY-----EETAEMQRQEIEMNERVLEDFED 536
           +++ + G+ ++  +DSKM+S      EE  E  R ++  +++ +E F D
Sbjct: 147 RQMARYGESLIREIDSKMESMPSEMSEEEKEKMRSDLNDDKKYVESFRD 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,718,587
Number of Sequences: 219361
Number of extensions: 1783618
Number of successful extensions: 6813
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 6391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6804
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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