ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re... 31 3.1
2YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ 30 4.0
3YBV8_YEAST (P38266) Protein YBR108W 30 6.9

>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/65 (29%), Positives = 37/65 (56%)
 Frame = -1

Query: 582 SHTVQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAK 403
           S T +E P +   S   + AV + PPA+  + ++ + +++KE++D++ K M+    +  K
Sbjct: 57  SATKREKPVIQH-SIDYQTAVVEIPPALIVHDDRSLILSEKEVLDLFEKMMEDMNLNEEK 115

Query: 402 MKLPL 388
            K PL
Sbjct: 116 -KAPL 119



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>YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ|
          Length = 2660

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -1

Query: 573 VQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAKM 400
           V++   ++ P+ VSEN +  PP   S N EQ++    ++I  +  + M   +E  A M
Sbjct: 109 VRQGDELDVPAQVSENNLTPPPGNSSGNLEQQIASTSQQIGSLLAEDMN--SEQAANM 164



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>YBV8_YEAST (P38266) Protein YBR108W|
          Length = 947

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -1

Query: 591 VDSSHTVQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQV 469
           V S HT + +P    P     N V+ PPP    NFE+   V
Sbjct: 531 VPSEHTTKNAPERAVPILPPRNNVEPPPPPSRGNFERTESV 571


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,537,567
Number of Sequences: 219361
Number of extensions: 935654
Number of successful extensions: 2800
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2800
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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