| Clone Name | rbaal20b09 |
|---|---|
| Clone Library Name | barley_pub |
>PSA_MOUSE (Q11011) Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)| Length = 920 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 463 VAHPDELDEEFDTFPTSKSPDLIRMRYD 380 V HP E+DE FD SK +IRM +D Sbjct: 424 VGHPSEVDEIFDAISYSKGASVIRMLHD 451
>PSA_HUMAN (P55786) Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)| Length = 919 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 463 VAHPDELDEEFDTFPTSKSPDLIRMRYD 380 V HP E+DE FD SK +IRM +D Sbjct: 423 VGHPSEVDEIFDAISYSKGASVIRMLHD 450
>RS15F_ARATH (Q9FML6) 40S ribosomal protein S15-6| Length = 160 Score = 31.2 bits (69), Expect = 2.7 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -2 Query: 539 LIGLWNYRFRATCPTTYEHKDILCGCCSSRRA 444 +IG + F TC H+ +CGCC RR+ Sbjct: 122 MIGHYLAEFSMTCKKVNHHRPRICGCCCFRRS 153
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = -3 Query: 421 PTSKSPDLIRMRYDRLRHVA---GRIQ--TVVGDIATQGERLQSLLSWRDPRATA 272 P D + R+DRLR+V GRI VVG I Q RL +LS+++ A A Sbjct: 51 PLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFA 105
>NU2M_NEUCR (Q35140) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 583 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = -3 Query: 277 TAMFLLFC-LFTAIILYITPFQVIALCLGFFWMRHPRFRHKVPAA 146 T +F +F L + +IL +T F I F+ MRHPRF +K P A Sbjct: 64 TQVFQIFIFLISILILQLTSFDPIKK---FYIMRHPRFINKWPRA 105
>MRE11_MACFA (Q60HE6) Double-strand break repair protein MRE11A (MRE11 homolog| 1) (MRE11 meiotic recombination 11 homolog A) Length = 707 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -3 Query: 499 PPHMNTRISYADVAHPDELDEEFDTFPTSKSPD 401 P T +Y++V DE DEE D FPT+ D Sbjct: 630 PSRNVTTKNYSEVIEVDESDEEEDVFPTTSKTD 662
>GPR39_MOUSE (Q5U431) Probable G-protein coupled receptor 39| Length = 456 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +2 Query: 383 IPHPNQVRALGGWERVKFLIKLVWMSNIRIRYPCVHMWWDTWPGTDNSTTQSRTC 547 I HP + +A+ G +VK LI VW+++ + P + +P + T + C Sbjct: 137 ICHPFKYKAVSGPRQVKLLIGFVWVTSALVALPLLFAMGIEYPLVNVPTHKGLNC 191
>IMMA_CITFR (P05701) Colicin-A immunity protein (Microcin-A immunity protein)| Length = 178 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = -3 Query: 334 IATQGERLQSLLSWRDPRATAMFLLFCL---FTAIILYITPFQV 212 IAT E L S+ S +P T + ++C F A+ILYI F++ Sbjct: 48 IATSTENLPSITSSYNPLMTKVMDIYCKTAPFLALILYILTFKI 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,783,427 Number of Sequences: 219361 Number of extensions: 2028257 Number of successful extensions: 6215 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6210 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)